| Literature DB >> 36174992 |
Hyung Young Kim1, Soo-Jong Hong2, Kangmo Ahn3, Dong In Suh4, Shin Hye Noh5, Soo Yeon Kim6, Jinho Yu2, Jung Min Ko4, Min Goo Lee5, Kyung Won Kim7.
Abstract
PURPOSE: Cystic fibrosis (CF), caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene, is rare among non-Caucasians. We aimed to identify the clinical features and CFTR mutations in Korean children.Entities:
Keywords: Cystic fibrosis; Korea; child; cystic fibrosis transmembrane conductance regulator; mutation
Year: 2022 PMID: 36174992 PMCID: PMC9523417 DOI: 10.4168/aair.2022.14.5.494
Source DB: PubMed Journal: Allergy Asthma Immunol Res ISSN: 2092-7355 Impact factor: 5.096
Participant characteristics at diagnosis and follow-up (n = 18)
| Clinical features | Value | |
|---|---|---|
| Age (yr) at diagnosis | 9.2 (0.4, 19.2) | |
| Male | 7 (38.9) | |
| Growth retardation at diagnosis | ||
| Weight < 3 percentile | 11 (61.1) | |
| Height < 3 percentile | 7 (38.9) | |
| Respiratory failure at diagnosis | 6 (33.3) | |
| Follow-up period (yr) | 3.7 (0.4, 14.3) | |
| Deaths* | 4 (22.2) | |
| Age (yr) at death | 10.6 (5.8, 16.8) | |
| Survival period (yr) | 4.2 (0.4, 6.9) | |
Data are presented as number (%) and median (minimum, maximum).
*The causes of death were pneumonia (n = 1), septic shock (n = 1), rejection after lung transplantation (n = 1), and liver failure/cerebral hemorrhage (n = 1).
Clinical and laboratory findings at diagnosis (n = 18)
| Clinical and laboratory findings at diagnosis | Value | ||
|---|---|---|---|
| Findings applied for the diagnostic criteria | |||
| Typical clinical features | |||
| Respiratory tract | 18 (100.0) | ||
| Digestive tract | 15 (83.3) | ||
| Others* | 3 (16.7) | ||
| A history of CF in a sibling (n = 15) | 4 (26.7) | ||
| Sweat chloride concentration ≥ 60 mmol/L (n = 8)† | 7 (87.5) | ||
| Two mutations known to cause CF on separate alleles‡ | 16 (88.9) | ||
| Respiratory findings at diagnosis | |||
| Chest CT | |||
| Bronchiectasis | 14 (77.8) | ||
| Cyst formation | 1 (5.6) | ||
| Spirometry (n = 10) | |||
| FEV1 | −3.61 (−5.78, 1.78) | ||
| FEV1/FVC | −3.38 (−4.40, −0.60) | ||
| FEF25–75 | −4.45 (−5.78, 0.54) | ||
| Sputum culture (n = 15) | |||
| 10 (66.7) | |||
| 6 (40.0) | |||
| Others§ | 6 (40.0) | ||
Data are presented as number (%) and median (minimum, maximum).
CT, computed tomography; FEV1, forced expiratory volume in one second; FVC, forced vital capacity; FEF25–75, forced expiratory flow at 25%–75% of forced vital capacity.
*Other features included hyperglycemia (n = 2), glucosuria (n = 1), and delayed puberty (n = 1).
†Sweat chloride test was performed in 8 patients but failed in 1.
‡Using mutation classifications identified in the ClinVar (https://www.ncbi.nlm.nih.gov/clinvar/).
§Other bacterial organisms were Haemophilus influenzae (n = 2), Stenotrophomonas maltophilia (n = 2), Streptococcus pneumoniae (n = 1), and Achromobacter xylosoxidans (n = 1).
Results of CFTR gene testing and the sweat chloride test in 18 Korean patients with CF
| Patient No. | Age at diagnosis | Sex | First variant | Second variant | Sweat test (mmol/L) | Reference | ||
|---|---|---|---|---|---|---|---|---|
| cDNA name | Protein name | cDNA name | Protein name | |||||
| 1* | 14 yr 11 mon | Female |
| - |
| - | ND |
|
| 2 | 9 yr 2 mon | Male |
| - |
| - | 103.7 | |
| 3* | 6 yr 3 mon | Male |
| - | Exon 14a deletion | - | ND |
|
| 4a* | 14 yr 1 mon | Male |
| - | c.3871C>T | p.Gln1291Ter | ND |
|
| 5a* | 19 yr 3 mon | Male |
| - | c.3871C>T | p.Gln1291Ter | ND |
|
| 6* | 9 yr 2 mon | Male |
| - |
| p.Arg1066Cys | ND |
|
| 7 | 5 yr 8 mon | Male |
| - |
| p.Arg553Ter | ND | |
| 8 | 13 yr 8 mon | Female |
| - | c.2052del | p.Lys684fs | ND | |
| 9b | 7 yr 11 mon | Female | c.1322T>C | p.Leu441Pro | c.223C>T | p.Arg75Ter | 123 | |
| 10b | 9 yr 4 mon | Female | c.1322T>C | p.Leu441Pro | c.223C>T | p.Arg75Ter | Fail | |
| 11 | 7 mon | Female | c.1322T>C | p.Leu441Pro | c.273+2T>A | - | ND | |
| 12* | 5 yr | Female | c.1322T>C | p.Leu441Pro | - | - | 88.7 |
|
| 13 | 9 yr 8 mon | Female |
| p.Asp993Tyr |
| p.Gln220Ter | 71.1 | |
| 14 | 13 yr 3 mon | Female |
| p.Asp993Tyr |
| p.Leu88Ter | ND | |
| 15* | 5 yr 11 mon | Female | c.2562T>G | p.Thr854 = | c.2562T>G | p.Thr854 = | 97.5 |
|
| 16* | 4 mon | Male |
| p.Leu88Ter | c.2089_2090insA | p.Arg697LysfsX33 | ND |
|
| 17* | 10 mon | Female |
| p.Asn1303fs |
| - | 102 |
|
| 18* | 13 yr 9 mon | Female | c.3871C>T | p.Gln1291Ter | IVS8-5T | p.Met470Val | 108.1 |
|
Bold indicates the ‘Pathogenic’ variant in the ClinVar (https://www.ncbi.nlm.nih.gov/clinvar/).
CFTR, cystic fibrosis transmembrane conductance regulator; CF, cystic fibrosis; ND, not done.
*Previously reported cases.
aPatient 3 and 4 are siblings that share the same biological parents.
bPatient 7 and 8 are siblings that share the same biological parents.
Frequencies of CFTR gene mutations and variants present in Korean patients with CF
| Mutation type | cDNA name | Protein name | Chr 7 position* | dbSNP ID | Mutations, n (%) | Clinical significance in the ClinVar† |
|---|---|---|---|---|---|---|
| SNV | c.1322T>C | p.Leu441Pro | 117548753 | rs397508188 | 4 (11.1) | Not provided |
| c.3871C>T | p.Gln1291Ter | 117642591 | rs397508620 | 3 (8.3) | Not provided | |
| c.223C>T | p.Arg75Ter | 117509092 | rs121908749 | 2 (5.6) | Pathogenic | |
| c.2977G>T | p.Asp993Tyr | 117606742 | rs397508468 | 2 (5.6) | Pathogenic | |
| c.263T>G | p.Leu88Ter | 117509132 | rs397508412 | 2 (5.6) | Pathogenic | |
| c.1657C>T | p.Arg553Ter | 117587811 | rs74597325 | 1 (2.8) | Pathogenic | |
| c.3196C>T | p.Arg1066Cys | 117611637 | rs78194216 | 1 (2.8) | Pathogenic | |
| c.658C>T | p.Gln220Ter | 117535326 | rs397508778 | 1 (2.8) | Pathogenic | |
| c.1766+2T>C | - | 117590441 | rs1554389062 | 1 (2.8) | Pathogenic/Likely pathogenic | |
| c.2562T>G | p.Thr854 = | 117595001 | rs1042077 | 2 (5.6) | Benign/Likely benign | |
| c.273+2T>A | - | - | - | 1 (2.8) | Unreported | |
| Deletion | Exon 16-17b deletion | - | - | - | 10 (27.7) | Pathogenic |
| c.2052del | p.Lys684fs | 117592213 | rs121908746 | 1 (2.8) | Pathogenic | |
| Exon 14a deletion | - | - | - | 1 (2.8) | Unreported | |
| Duplication | c.3908dupA | p.Asn1303fs | 117652876 | rs397508637 | 1 (2.8) | Pathogenic |
| Insertion | c.2089_2090insA | p.Arg697LysfsX33 | - | - | 1 (2.8) | Unreported |
| Intron variant | IVS8-5T | p.Met470Val | - | - | 1 (2.8) | Unreported |
CFTR, cystic fibrosis transmembrane conductance regulator; CF, cystic fibrosis; SNV, single nucleotide variant; Chr, chromosome.
*Position of variants in GRCh38-hg38.
†Reporting clinical significance identified in the ClinVar (https://www.ncbi.nlm.nih.gov/clinvar/).
FigureRescue of L441P using VX809. Aldolase A was blotted as a loading control. Most wild-type CFTR proteins were detected in the fully glycosylated mature form (band C), whereas virtually all L441P mutant proteins appeared in the core-glycosylated form of around 150 kDa (band B). When treated with VX809, L441P showed better restoration of the folding defect than ΔF508.
CFTR, cystic fibrosis transmembrane conductance regulator.