Literature DB >> 36170825

Cell-type identity of the avian utricle.

Mirko Scheibinger1, Amanda Janesick2, Nesrine Benkafadar2, Daniel C Ellwanger2, Taha A Jan3, Stefan Heller4.   

Abstract

The avian utricle, a vestibular organ of the inner ear, displays turnover of sensory hair cells throughout life. This is in sharp contrast to the mammalian utricle, which shows limited regenerative capacity. Here, we use single-cell RNA sequencing to identify distinct marker genes for the different sensory hair cell subtypes of the chicken utricle, which we validated in situ. We provide markers for spatially distinct supporting cell populations and identify two transitional cell populations of dedifferentiating supporting cells and developing hair cells. Trajectory reconstruction resulted in an inventory of gene expression dynamics of natural hair cell generation in the avian utricle.
Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CP: Cell biology; CP: Neuroscience; extrastriola; hair cell; hair cell production; inner ear; striola; supporting cell; turnover; vestibular apparatus

Mesh:

Year:  2022        PMID: 36170825      PMCID: PMC9588199          DOI: 10.1016/j.celrep.2022.111432

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.995


  56 in total

1.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Authors:  Paul Shannon; Andrew Markiel; Owen Ozier; Nitin S Baliga; Jonathan T Wang; Daniel Ramage; Nada Amin; Benno Schwikowski; Trey Ideker
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

2.  Applying genomics to the avian inner ear: development of subtractive cDNA resources for exploring sensory function and hair cell regeneration.

Authors:  R David Hawkins; Cynthia A Helms; Julia B Winston; Mark E Warchol; Michael Lovett
Journal:  Genomics       Date:  2006-03-03       Impact factor: 5.736

3.  Electrophysiological properties of vestibular sensory and supporting cells in the labyrinth slice before and during regeneration.

Authors:  S Masetto; M J Correia
Journal:  J Neurophysiol       Date:  1997-10       Impact factor: 2.714

4.  Hair-cell numbers continue to increase in the utricular macula of the early posthatch chick.

Authors:  R J Goodyear; R Gates; A N Lukashkin; G P Richardson
Journal:  J Neurocytol       Date:  1999 Oct-Nov

5.  Notch signalling pathway mediates hair cell development in mammalian cochlea.

Authors:  P J Lanford; Y Lan; R Jiang; C Lindsell; G Weinmaster; T Gridley; M W Kelley
Journal:  Nat Genet       Date:  1999-03       Impact factor: 38.330

6.  Expression of GATA3 and tenascin in the avian vestibular maculae: normative patterns and changes during sensory regeneration.

Authors:  Mark E Warchol; Judith D Speck
Journal:  J Comp Neurol       Date:  2007-02-01       Impact factor: 3.215

7.  Identification of the hair cell soma-1 antigen, HCS-1, as otoferlin.

Authors:  Richard J Goodyear; P Kevin Legan; Jeffrey R Christiansen; Bei Xia; Julia Korchagina; Jonathan E Gale; Mark E Warchol; Jeffrey T Corwin; Guy P Richardson
Journal:  J Assoc Res Otolaryngol       Date:  2010-08-31

Review 8.  Signal integration by JNK and p38 MAPK pathways in cancer development.

Authors:  Erwin F Wagner; Angel R Nebreda
Journal:  Nat Rev Cancer       Date:  2009-08       Impact factor: 60.716

9.  Cell-type identity of the avian cochlea.

Authors:  Amanda Janesick; Mirko Scheibinger; Nesrine Benkafadar; Sakin Kirti; Daniel C Ellwanger; Stefan Heller
Journal:  Cell Rep       Date:  2021-03-23       Impact factor: 9.423

10.  gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration.

Authors:  Joshua Orvis; Brian Gottfried; Jayaram Kancherla; Ricky S Adkins; Yang Song; Amiel A Dror; Dustin Olley; Kevin Rose; Elena Chrysostomou; Michael C Kelly; Beatrice Milon; Maggie S Matern; Hela Azaiez; Brian Herb; Carlo Colantuoni; Robert L Carter; Seth A Ament; Matthew W Kelley; Owen White; Hector Corrada Bravo; Anup Mahurkar; Ronna Hertzano
Journal:  Nat Methods       Date:  2021-08       Impact factor: 47.990

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