| Literature DB >> 36147044 |
Dachao Wei1, Dingwei Deng1, Siming Gui1, Wei You1, Junqiang Feng1, Xiangyu Meng1, Xiheng Chen1, Jian Lv1, Yudi Tang1, Ting Chen2, Peng Liu1,3.
Abstract
Background: The Pipeline embolization device (PED) is a flow diverter used to treat intracranial aneurysms. In-stent stenosis (ISS) is a common complication of PED placement that can affect long-term outcome. This study aimed to establish a feasible, effective, and reliable model to predict ISS using machine learning methodology.Entities:
Keywords: Pipeline embolization device; complication; endovascular treatment; flow diverter; intracranial aneurysm; machine learning
Year: 2022 PMID: 36147044 PMCID: PMC9486156 DOI: 10.3389/fneur.2022.912984
Source DB: PubMed Journal: Front Neurol ISSN: 1664-2295 Impact factor: 4.086
Figure 1Study flow chart of patient selection and establishment of the machine learning model. RFE, recursive feature elimination; SHAP, Shapley additive explanation.
Figure 2Evaluation of machine learning model performance in the training, validation, and test sets. (A) Comparison of the area under the receiver operating curve of different models in the training set. (B) Comparison of the area under the receiver operating curve of different models in the validation set. (C) Comparison of the area under the receiver operating curve of different models in the test set. (D) The receiver operating curve of logistics regression. (E) Box plot of model area under the receiver operating curves in each loop. *Tukey honestly significant difference (HSD) test p < 0.05 between the models; ***Tukey HSD test p < 0.005 between the models; nsTukey HSD test p > 0.05 between the models. (F) Kaplan–Meier curves of in-stent stenosis rates for high-risk patients (predicted value > optimal threshold) and low-risk patients (predicted value < optimal threshold). ENT, elastic net; SVM, support vector machine; XGB, Xgboost; GNB, Gaussian Naïve Bayes; RF, random forest; LR, logistics regression.
Confusion matrix of models in the test set.
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| True | Stenosis | 9 | 5 | 6 | 8 | 7 | 7 | 9 | 5 | 6 | 8 |
| value | No stenosis | 20 | 57 | 20 | 57 | 20 | 57 | 36 | 41 | 14 | 63 |
ENT, elastic net; SVM, support vector machine; XGB, Xgboost; GNB, Gaussian Naïve Bayes; RF, random forest. Green: the prediction of models is consistent with the true value. Red: the prediction of models is inconsistent with the true value.
Comparison of model performance in the training, validation, and test sets.
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| ENT | 0.773 | 0.769 | 0.776 | 0.761 | 0.733 | 0.790 | 0.740 | 0.725 | 0.709 | 0.697 | 0.721 | 0.779 | 0.751 | 0.806 | 0.634 | 0.608 | 0.659 | 0.666 | 0.646 | 0.686 |
| SVM | 0.778 | 0.775 | 0.780 | 0.769 | 0.742 | 0.797 | 0.664 | 0.692 | 0.670 | 0.657 | 0.683 | 0.758 | 0.733 | 0.782 | 0.624 | 0.599 | 0.649 | 0.641 | 0.623 | 0.658 |
| XGB | 0.899 | 0.897 | 0.902 | 0.881 | 0.861 | 0.900 | 0.630 | 0.703 | 0.680 | 0.668 | 0.693 | 0.719 | 0.691 | 0.747 | 0.662 | 0.634 | 0.690 | 0.669 | 0.649 | 0.689 |
| GNB | 0.772 | 0.768 | 0.775 | 0.761 | 0.736 | 0.785 | 0.582 | 0.549 | 0.675 | 0.661 | 0.689 | 0.673 | 0.644 | 0.702 | 0.707 | 0.683 | 0.732 | 0.699 | 0.683 | 0.716 |
| RF | 0.870 | 0.868 | 0.871 | 0.852 | 0.831 | 0.874 | 0.709 | 0.769 | 0.687 | 0.674 | 0.700 | 0.722 | 0.693 | 0.751 | 0.666 | 0.640 | 0.692 | 0.651 | 0.633 | 0.669 |
AUC, area under the curve; CI, confidence interval; ENT, elastic net; SVM, support vector machine; XGB, Xgboost; GNB, Gaussian Naïve Bayes; RF, random forest.
Figure 3Shapley additive explanation (SHAP) analysis of the elastic net (ENT) model. (A) Association between the SHAP value and feature value. (B) Feature importance (mean |SHAP value|) of each predictor. (C) Two ENT model prediction examples. ICA, internal carotid artery; NR, neck ratio; RDWCV, coefficient of variation of red cell volume distribution width.