| Literature DB >> 36140752 |
Yi Shen1, Fuju Li1, Lina Cao1, Yunyun Wang1, Jing Xiao1, Xiaoyi Zhou2, Tian Tian1.
Abstract
Whether hip osteoarthritis (OA) could increase the risk of lacunar stroke (LS) is not well understood. This two-sample Mendelian randomization (MR) study aimed to investigate in depth the effect of genetically predicted hip OA on LS risk. Hip OA-related instrumental variables (IVs) were selected from a genome-wide association study (GWAS) of 393,873 individuals. The summary data of LS were obtained from a GWAS meta-analysis, including 16,030 cases and 248,929 controls. We used the inverse-variance weighted (IVW) as the primary MR analysis method. Moreover, the weighted-median, MR-Egger regression, and the MR pleiotropy residual sum and outlier (MR-PRESSO) test were supplementary methods. The sensitivity analysis was performed using the leave-one-out test. We identified the positive causal relationship between hip OA and the risk of LS (odds ratio [OR] = 1.20, 95% confidence interval [CI]: 1.07, 1.36; p = 0.002 using the IVW method). The weighted median method provided similar results. There was no evidence of directed pleiotropy, and sensitivity analysis results were stable, suggesting the robustness of our study. This study showed a causal effect of hip OA on the risk of LS, and more efforts should be made to explore the potential mechanisms in the future.Entities:
Keywords: Mendelian randomization; genome-wide association studies; hip osteoarthritis; lacunar stroke; single-nucleotide polymorphism
Mesh:
Year: 2022 PMID: 36140752 PMCID: PMC9498627 DOI: 10.3390/genes13091584
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Figure 1Design flow chart of the present study. Assumption 1: Instrumental variables should be robustly associated with exposure. Assumption 2: Instrumental variables should not be associated with any confounders. Assumption 3: Instrumental variables influence the outcome through the exposure, not through other pathways.
Effect estimates of the associations between hip osteoarthritis and risk of lacunar stroke.
| Method | SNPs (N) | OR | 95%CI | MR | Heterogeneity | Pleiotropy Intercept |
|---|---|---|---|---|---|---|
| IVW | 22 | 1.20 | 1.07~1.36 | 0.002 | 23.35/0.325 | |
| Weighted median | 22 | 1.24 | 1.05~1.46 | 0.012 | ||
| MR Egger | 22 | 1.34 | 0.87–2.07 | 0.203 | 0.623 a | |
| MR-PRESSO | 22 | / | / | 0.354 b |
SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval; IVW, inverse-variance-weighted; MR, Mendelian randomization; MR-PRESSO, MR pleiotropy residual sum and outlier. a p-value of the intercept from MR Egger regression analysis. b p-value of MR-PRESSO global test.
Characteristics of the genetic variants associated with hip osteoarthritis and their effects on lacunar stroke (22 SNPs).
| SNP | Chr | Position | Effect Allele | SNPs-Hip Osteoarthritis | SNPs-Lacunar Stroke | ||||
|---|---|---|---|---|---|---|---|---|---|
| β | SE | β | SE | ||||||
| rs10492367 | 12 | 28014970 | T | 0.15 | 0.01 | 1.25 × 10−24 | −0.02 | 0.03 | 0.51 |
| rs10896015 | 11 | 65323725 | A | −0.08 | 0.01 | 2.74 × 10−9 | 0.01 | 0.02 | 0.56 |
| rs11059094 | 12 | 122606837 | T | 0.08 | 0.01 | 7.38 × 10−11 | −0.02 | 0.02 | 0.41 |
| rs115740542 | 6 | 26123502 | C | 0.13 | 0.02 | 1.60 × 10−8 | 0.06 | 0.04 | 0.12 |
| rs11583641 | 1 | 183906245 | T | −0.08 | 0.01 | 5.57 × 10−10 | −0.04 | 0.02 | 0.07 |
| rs12040949 | 1 | 150447462 | T | −0.07 | 0.01 | 2.83 × 10−8 | −0.02 | 0.02 | 0.43 |
| rs12209223 | 6 | 76164589 | A | 0.16 | 0.02 | 3.88 × 10−16 | 0.04 | 0.03 | 0.31 |
| rs13300602 | 9 | 129412938 | G | 0.07 | 0.01 | 1.65 × 10−9 | 0.03 | 0.02 | 0.23 |
| rs1835323 | 2 | 43512130 | T | −0.07 | 0.01 | 4.56 × 10−8 | −0.02 | 0.02 | 0.37 |
| rs1913707 | 4 | 13039440 | G | −0.08 | 0.01 | 2.96 × 10−11 | 0.01 | 0.02 | 0.64 |
| rs2396502 | 6 | 45357699 | C | 0.08 | 0.01 | 2.12 × 10−12 | 0.00 | 0.02 | 0.88 |
| rs2785988 | 1 | 219744138 | A | 0.08 | 0.01 | 7.30 × 10−11 | 0.00 | 0.02 | 0.83 |
| rs2836618 | 21 | 40048295 | A | 0.09 | 0.01 | 3.20 × 10−11 | 0.05 | 0.02 | 0.03 |
| rs3774355 | 3 | 52817778 | A | 0.09 | 0.01 | 8.20 × 10−14 | 0.02 | 0.02 | 0.23 |
| rs4252548 | 19 | 55879672 | T | 0.28 | 0.04 | 1.96 × 10−12 | 0.11 | 0.08 | 0.15 |
| rs4338381 | 1 | 103572927 | G | −0.10 | 0.01 | 4.37 × 10−15 | −0.01 | 0.02 | 0.70 |
| rs62063281 | 17 | 44038785 | G | 0.10 | 0.01 | 5.30 × 10−12 | 0.07 | 0.03 | 0.01 |
| rs74767794 | 1 | 184006128 | G | −0.08 | 0.01 | 2.56 × 10−9 | 0.02 | 0.02 | 0.47 |
| rs7571789 | 2 | 70714793 | C | −0.09 | 0.01 | 3.26 × 10−14 | −0.05 | 0.02 | 0.03 |
| rs79056043 | 12 | 59289598 | G | 0.16 | 0.03 | 1.33 × 10−9 | 0.03 | 0.05 | 0.46 |
| rs798748 | 4 | 1716770 | C | 0.07 | 0.01 | 2.50 × 10−9 | 0.00 | 0.02 | 0.83 |
| rs80287694 | 6 | 55636940 | G | 0.11 | 0.02 | 2.66 × 10−9 | 0.05 | 0.03 | 0.17 |
SNP, single nucleotide polymorphism; SE, standard error.
Figure 2Scatter plots showed the causal effect of hip osteoarthritis on lacunar stroke. SNP, single nucleotide polymorphism; MR, Mendelian randomization.
Figure 3Forrest plots of the causal effects of hip osteoarthritis associated SNPs on lacunar stroke.
Figure 4Funnel plot showed no significant heterogeneity among the SNPs. SE, standard error.