Literature DB >> 361392

RNA-protein neighbourhoods of the ribosome obtained by crosslinking.

H G Bäumert, S E Sköld, C G Kurland.   

Abstract

It is possible to crosslink protein to nucleic acid with diepoxybutane which reacts mainly with the N-7 of guanine as well as the thiol and aminogroups in protein; the resulting crosslinked complexes are cleavable. When this reagent is applied to ribosomes, even under conditions that minimize the extent of reaction, at least half of the ribosomal proteins can be recovered crosslinked to one or other of the major ribosomal RNA species. In addition, one fourth of the proteins can be recovered crosslinked to the RNA of the heterologous ribosomal subunit. Some of the remaining proteins may also be crosslinkable to the RNA, but additional experiments are required to confirm this.

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Year:  1978        PMID: 361392     DOI: 10.1111/j.1432-1033.1978.tb12536.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  16 in total

1.  Gene F of plasmid RSF1010 codes for a low-molecular-weight repressor protein that autoregulates expression of the repAC operon.

Authors:  S Maeser; P Scholz; S Otto; E Scherzinger
Journal:  Nucleic Acids Res       Date:  1990-11-11       Impact factor: 16.971

2.  Proteins on ribosome surface: measurements of protein exposure by hot tritium bombardment technique.

Authors:  D E Agafonov; V A Kolb; A S Spirin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-25       Impact factor: 11.205

3.  Cross-linking of mRNA to initiation factor eIF-3, 24 kDa cap binding protein and ribosomal proteins S1, S3/3a, S6 and S11 within the 48S pre-initiation complex.

Authors:  P Westermann; O Nygård
Journal:  Nucleic Acids Res       Date:  1984-12-11       Impact factor: 16.971

4.  A versatile method for the coupling of protein to DNA: synthesis of alpha 2-macroglobulin-DNA conjugates.

Authors:  S Cheng; G T Merlino; I H Pastan
Journal:  Nucleic Acids Res       Date:  1983-02-11       Impact factor: 16.971

5.  The alpha and gamma subunits of initiation factor eIF-2 can be cross-linked to 18S ribosomal RNA within the quaternary initiation complex, eIF-2.Met-tRNAf.GDPCP.small ribosomal subunit.

Authors:  P Westermann; O Nygård; H Bielka
Journal:  Nucleic Acids Res       Date:  1980-07-25       Impact factor: 16.971

6.  Max-Planck-Institut für Molekulare Genetik, Abteilung Wittmann, Berlin-Dahlem, GFR.

Authors:  C Zwieb; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1979       Impact factor: 16.971

7.  The use of sym-triazine trichloride in RNA-protein cross-linking studies with Escherichia coli ribosomal subunits.

Authors:  C Oste; R Brimacombe
Journal:  Mol Gen Genet       Date:  1979-01-05

8.  Chemically synthesized non-radioactive biotinylated long-chain nucleic acid hybridization probes.

Authors:  A H al-Hakim; R Hull
Journal:  Biochem J       Date:  1988-05-01       Impact factor: 3.857

9.  Protein-RNA crosslinking in Escherichia coli 30S ribosomal subunits. Identification of a 16S rRNA fragment crosslinked to protein S12 by the use of the chemical crosslinking reagent 1-ethyl-3-dimethyl-aminopropylcarbodiimide.

Authors:  C Chiaruttini; A Expert-Bezançon; D Hayes; B Ehresmann
Journal:  Nucleic Acids Res       Date:  1982-12-11       Impact factor: 16.971

10.  The use of 2-iminothiolane as an RNA-protein cross-linking agent in Escherichia coli ribosomes, and the localisation on 23S RNA of sites cross-linked to proteins L4, L6, L21, L23, L27 and L29.

Authors:  I Wower; J Wower; M Meinke; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1981-09-11       Impact factor: 16.971

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