Literature DB >> 36138206

Ecological and evolutionary dynamics of multi-strain RNA viruses.

Dennis N Makau1, Samantha Lycett2, Matthew Michalska-Smith3, Igor A D Paploski1, Maxim C-J Cheeran1, Meggan E Craft3, Rowland R Kao2, Declan C Schroeder1,4, Andrea Doeschl-Wilson2, Kimberly VanderWaal5.   

Abstract

Potential interactions among co-circulating viral strains in host populations are often overlooked in the study of virus transmission. However, these interactions probably shape transmission dynamics by influencing host immune responses or altering the relative fitness among co-circulating strains. In this Review, we describe multi-strain dynamics from ecological and evolutionary perspectives, outline scales in which multi-strain dynamics occur and summarize important immunological, phylogenetic and mathematical modelling approaches used to quantify interactions among strains. We also discuss how host-pathogen interactions influence the co-circulation of pathogens. Finally, we highlight outstanding questions and knowledge gaps in the current theory and study of ecological and evolutionary dynamics of multi-strain viruses.
© 2022. Springer Nature Limited.

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Year:  2022        PMID: 36138206     DOI: 10.1038/s41559-022-01860-6

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   19.100


  120 in total

1.  Dynamics and selection of many-strain pathogens.

Authors:  Julia R Gog; Bryan T Grenfell
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

Review 2.  Virus species and virus identification: past and current controversies.

Authors:  M H V Van Regenmortel
Journal:  Infect Genet Evol       Date:  2006-05-19       Impact factor: 3.342

3.  The generation of influenza outbreaks by a network of host immune responses against a limited set of antigenic types.

Authors:  Mario Recker; Oliver G Pybus; Sean Nee; Sunetra Gupta
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-25       Impact factor: 11.205

4.  Chaos, persistence, and evolution of strain structure in antigenically diverse infectious agents.

Authors:  S Gupta; N Ferguson; R Anderson
Journal:  Science       Date:  1998-05-08       Impact factor: 47.728

Review 5.  Capturing the dynamics of pathogens with many strains.

Authors:  Adam J Kucharski; Viggo Andreasen; Julia R Gog
Journal:  J Math Biol       Date:  2015-03-24       Impact factor: 2.259

6.  Generic approach for mathematical model of multi-strain pandemics.

Authors:  Teddy Lazebnik; Svetlana Bunimovich-Mendrazitsky
Journal:  PLoS One       Date:  2022-04-28       Impact factor: 3.752

7.  Natural, persistent oscillations in a spatial multi-strain disease system with application to dengue.

Authors:  José Lourenço; Mario Recker
Journal:  PLoS Comput Biol       Date:  2013-10-24       Impact factor: 4.475

8.  The antigenic evolution of influenza: drift or thrift?

Authors:  Paul S Wikramaratna; Michi Sandeman; Mario Recker; Sunetra Gupta
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

9.  Higher virulence of swine H1N2 influenza viruses containing avian-origin HA and 2009 pandemic PA and NP in pigs and mice.

Authors:  Yunyueng Jang; Taehyun Seo; Sang Heui Seo
Journal:  Arch Virol       Date:  2020-03-28       Impact factor: 2.574

Review 10.  Influenza A Virus in Swine: Epidemiology, Challenges and Vaccination Strategies.

Authors:  José Carlos Mancera Gracia; Douglas S Pearce; Aleksandar Masic; Monica Balasch
Journal:  Front Vet Sci       Date:  2020-09-22
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