Literature DB >> 36131047

Rare copy number variation in posttraumatic stress disorder.

Jonathan Sebat1,2,3, Caroline M Nievergelt1,4,5, Adam X Maihofer6,7,8, Worrawat Engchuan9,10, Guillaume Huguet11, Marieke Klein1, Jeffrey R MacDonald9, Omar Shanta12, Bhooma Thiruvahindrapuram9, Martineau Jean-Louis13, Zohra Saci11, Sebastien Jacquemont11,14,15, Stephen W Scherer9,16,17, Elizabeth Ketema1,4,5, Allison E Aiello18, Ananda B Amstadter19, Esmina Avdibegović20, Dragan Babic21, Dewleen G Baker1,4,22, Jonathan I Bisson23, Marco P Boks24, Elizabeth A Bolger25,26, Richard A Bryant27, Angela C Bustamante28, Jose Miguel Caldas-de-Almeida29, Graça Cardoso30, Jurgen Deckert31, Douglas L Delahanty32,33, Katharina Domschke34,35, Boadie W Dunlop36, Alma Dzubur-Kulenovic37, Alexandra Evans23, Norah C Feeny38, Carol E Franz1, Aarti Gautam39, Elbert Geuze40,41, Aferdita Goci42, Rasha Hammamieh39, Miro Jakovljevic43, Marti Jett44,45, Ian Jones23, Milissa L Kaufman25,26, Ronald C Kessler46, Anthony P King47, William S Kremen1, Bruce R Lawford48, Lauren A M Lebois25,26, Catrin Lewis23, Israel Liberzon49, Sarah D Linnstaedt50, Bozo Lugonja23, Jurjen J Luykx41,51, Michael J Lyons52, Matig R Mavissakalian53, Katie A McLaughlin54, Samuel A McLean50,55, Divya Mehta48,56, Rebecca Mellor57, Charles Phillip Morris48, Seid Muhie58, Holly K Orcutt59, Matthew Peverill60, Andrew Ratanatharathorn61,62, Victoria B Risbrough1,4,5, Albert Rizzo63, Andrea L Roberts64, Alex O Rothbaum65, Barbara O Rothbaum66, Peter Roy-Byrne67, Kenneth J Ruggiero68, Bart P F Rutten69, Dick Schijven41,51, Julia S Seng70,71,72,73, Christina M Sheerin19, Michael A Sorenson1, Martin H Teicher25,74, Monica Uddin75, Robert J Ursano76, Christiaan H Vinkers77,78,79, Joanne Voisey48,56, Heike Weber31, Sherry Winternitz25,26, Miguel Xavier80, Ruoting Yang58, Ross McD Young81,82, Lori A Zoellner67, Rany M Salem83, Richard A Shaffer84, Tianying Wu85,86, Kerry J Ressler25,26,66, Murray B Stein1,22,87, Karestan C Koenen88,89,90.   

Abstract

Posttraumatic stress disorder (PTSD) is a heritable (h2 = 24-71%) psychiatric illness. Copy number variation (CNV) is a form of rare genetic variation that has been implicated in the etiology of psychiatric disorders, but no large-scale investigation of CNV in PTSD has been performed. We present an association study of CNV burden and PTSD symptoms in a sample of 114,383 participants (13,036 cases and 101,347 controls) of European ancestry. CNVs were called using two calling algorithms and intersected to a consensus set. Quality control was performed to remove strong outlier samples. CNVs were examined for association with PTSD within each cohort using linear or logistic regression analysis adjusted for population structure and CNV quality metrics, then inverse variance weighted meta-analyzed across cohorts. We examined the genome-wide total span of CNVs, enrichment of CNVs within specified gene-sets, and CNVs overlapping individual genes and implicated neurodevelopmental regions. The total distance covered by deletions crossing over known neurodevelopmental CNV regions was significant (beta = 0.029, SE = 0.005, P = 6.3 × 10-8). The genome-wide neurodevelopmental CNV burden identified explains 0.034% of the variation in PTSD symptoms. The 15q11.2 BP1-BP2 microdeletion region was significantly associated with PTSD (beta = 0.0206, SE = 0.0056, P = 0.0002). No individual significant genes interrupted by CNV were identified. 22 gene pathways related to the function of the nervous system and brain were significant in pathway analysis (FDR q < 0.05), but these associations were not significant once NDD regions were removed. A larger sample size, better detection methods, and annotated resources of CNV are needed to explore this relationship further.
© 2022. The Author(s).

Entities:  

Year:  2022        PMID: 36131047     DOI: 10.1038/s41380-022-01776-4

Source DB:  PubMed          Journal:  Mol Psychiatry        ISSN: 1359-4184            Impact factor:   13.437


  47 in total

Review 1.  The Genetics of Stress-Related Disorders: PTSD, Depression, and Anxiety Disorders.

Authors:  Jordan W Smoller
Journal:  Neuropsychopharmacology       Date:  2015-08-31       Impact factor: 7.853

Review 2.  Psychiatric Genomics: An Update and an Agenda.

Authors:  Patrick F Sullivan; Arpana Agrawal; Cynthia M Bulik; Ole A Andreassen; Anders D Børglum; Gerome Breen; Sven Cichon; Howard J Edenberg; Stephen V Faraone; Joel Gelernter; Carol A Mathews; Caroline M Nievergelt; Jordan W Smoller; Michael C O'Donovan
Journal:  Am J Psychiatry       Date:  2017-10-03       Impact factor: 18.112

3.  Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects.

Authors:  Christian R Marshall; Daniel P Howrigan; Daniele Merico; Bhooma Thiruvahindrapuram; Wenting Wu; Douglas S Greer; Danny Antaki; Aniket Shetty; Peter A Holmans; Dalila Pinto; Madhusudan Gujral; William M Brandler; Dheeraj Malhotra; Zhouzhi Wang; Karin V Fuentes Fajarado; Michelle S Maile; Stephan Ripke; Ingrid Agartz; Margot Albus; Madeline Alexander; Farooq Amin; Joshua Atkins; Silviu A Bacanu; Richard A Belliveau; Sarah E Bergen; Marcelo Bertalan; Elizabeth Bevilacqua; Tim B Bigdeli; Donald W Black; Richard Bruggeman; Nancy G Buccola; Randy L Buckner; Brendan Bulik-Sullivan; William Byerley; Wiepke Cahn; Guiqing Cai; Murray J Cairns; Dominique Campion; Rita M Cantor; Vaughan J Carr; Noa Carrera; Stanley V Catts; Kimberley D Chambert; Wei Cheng; C Robert Cloninger; David Cohen; Paul Cormican; Nick Craddock; Benedicto Crespo-Facorro; James J Crowley; David Curtis; Michael Davidson; Kenneth L Davis; Franziska Degenhardt; Jurgen Del Favero; Lynn E DeLisi; Dimitris Dikeos; Timothy Dinan; Srdjan Djurovic; Gary Donohoe; Elodie Drapeau; Jubao Duan; Frank Dudbridge; Peter Eichhammer; Johan Eriksson; Valentina Escott-Price; Laurent Essioux; Ayman H Fanous; Kai-How Farh; Martilias S Farrell; Josef Frank; Lude Franke; Robert Freedman; Nelson B Freimer; Joseph I Friedman; Andreas J Forstner; Menachem Fromer; Giulio Genovese; Lyudmila Georgieva; Elliot S Gershon; Ina Giegling; Paola Giusti-Rodríguez; Stephanie Godard; Jacqueline I Goldstein; Jacob Gratten; Lieuwe de Haan; Marian L Hamshere; Mark Hansen; Thomas Hansen; Vahram Haroutunian; Annette M Hartmann; Frans A Henskens; Stefan Herms; Joel N Hirschhorn; Per Hoffmann; Andrea Hofman; Hailiang Huang; Masashi Ikeda; Inge Joa; Anna K Kähler; René S Kahn; Luba Kalaydjieva; Juha Karjalainen; David Kavanagh; Matthew C Keller; Brian J Kelly; James L Kennedy; Yunjung Kim; James A Knowles; Bettina Konte; Claudine Laurent; Phil Lee; S Hong Lee; Sophie E Legge; Bernard Lerer; Deborah L Levy; Kung-Yee Liang; Jeffrey Lieberman; Jouko Lönnqvist; Carmel M Loughland; Patrik K E Magnusson; Brion S Maher; Wolfgang Maier; Jacques Mallet; Manuel Mattheisen; Morten Mattingsdal; Robert W McCarley; Colm McDonald; Andrew M McIntosh; Sandra Meier; Carin J Meijer; Ingrid Melle; Raquelle I Mesholam-Gately; Andres Metspalu; Patricia T Michie; Lili Milani; Vihra Milanova; Younes Mokrab; Derek W Morris; Bertram Müller-Myhsok; Kieran C Murphy; Robin M Murray; Inez Myin-Germeys; Igor Nenadic; Deborah A Nertney; Gerald Nestadt; Kristin K Nicodemus; Laura Nisenbaum; Annelie Nordin; Eadbhard O'Callaghan; Colm O'Dushlaine; Sang-Yun Oh; Ann Olincy; Line Olsen; F Anthony O'Neill; Jim Van Os; Christos Pantelis; George N Papadimitriou; Elena Parkhomenko; Michele T Pato; Tiina Paunio; Diana O Perkins; Tune H Pers; Olli Pietiläinen; Jonathan Pimm; Andrew J Pocklington; John Powell; Alkes Price; Ann E Pulver; Shaun M Purcell; Digby Quested; Henrik B Rasmussen; Abraham Reichenberg; Mark A Reimers; Alexander L Richards; Joshua L Roffman; Panos Roussos; Douglas M Ruderfer; Veikko Salomaa; Alan R Sanders; Adam Savitz; Ulrich Schall; Thomas G Schulze; Sibylle G Schwab; Edward M Scolnick; Rodney J Scott; Larry J Seidman; Jianxin Shi; Jeremy M Silverman; Jordan W Smoller; Erik Söderman; Chris C A Spencer; Eli A Stahl; Eric Strengman; Jana Strohmaier; T Scott Stroup; Jaana Suvisaari; Dragan M Svrakic; Jin P Szatkiewicz; Srinivas Thirumalai; Paul A Tooney; Juha Veijola; Peter M Visscher; John Waddington; Dermot Walsh; Bradley T Webb; Mark Weiser; Dieter B Wildenauer; Nigel M Williams; Stephanie Williams; Stephanie H Witt; Aaron R Wolen; Brandon K Wormley; Naomi R Wray; Jing Qin Wu; Clement C Zai; Rolf Adolfsson; Ole A Andreassen; Douglas H R Blackwood; Elvira Bramon; Joseph D Buxbaum; Sven Cichon; David A Collier; Aiden Corvin; Mark J Daly; Ariel Darvasi; Enrico Domenici; Tõnu Esko; Pablo V Gejman; Michael Gill; Hugh Gurling; Christina M Hultman; Nakao Iwata; Assen V Jablensky; Erik G Jönsson; Kenneth S Kendler; George Kirov; Jo Knight; Douglas F Levinson; Qingqin S Li; Steven A McCarroll; Andrew McQuillin; Jennifer L Moran; Bryan J Mowry; Markus M Nöthen; Roel A Ophoff; Michael J Owen; Aarno Palotie; Carlos N Pato; Tracey L Petryshen; Danielle Posthuma; Marcella Rietschel; Brien P Riley; Dan Rujescu; Pamela Sklar; David St Clair; James T R Walters; Thomas Werge; Patrick F Sullivan; Michael C O'Donovan; Stephen W Scherer; Benjamin M Neale; Jonathan Sebat
Journal:  Nat Genet       Date:  2016-11-21       Impact factor: 38.330

Review 4.  Genetic contributions to anxiety disorders: where we are and where we are heading.

Authors:  Helga Ask; Rosa Cheesman; Eshim S Jami; Daniel F Levey; Kirstin L Purves; Heike Weber
Journal:  Psychol Med       Date:  2021-02-09       Impact factor: 7.723

5.  Association of Rare Copy Number Variants With Risk of Depression.

Authors:  Kimberley Marie Kendall; Elliott Rees; Matthew Bracher-Smith; Sophie Legge; Lucy Riglin; Stanley Zammit; Michael Conlon O'Donovan; Michael John Owen; Ian Jones; George Kirov; James Tynan Rhys Walters
Journal:  JAMA Psychiatry       Date:  2019-08-01       Impact factor: 21.596

6.  International meta-analysis of PTSD genome-wide association studies identifies sex- and ancestry-specific genetic risk loci.

Authors:  Caroline M Nievergelt; Adam X Maihofer; Torsten Klengel; Elizabeth G Atkinson; Chia-Yen Chen; Karmel W Choi; Jonathan R I Coleman; Shareefa Dalvie; Laramie E Duncan; Joel Gelernter; Daniel F Levey; Mark W Logue; Renato Polimanti; Allison C Provost; Andrew Ratanatharathorn; Murray B Stein; Katy Torres; Allison E Aiello; Lynn M Almli; Ananda B Amstadter; Søren B Andersen; Ole A Andreassen; Paul A Arbisi; Allison E Ashley-Koch; S Bryn Austin; Esmina Avdibegovic; Dragan Babić; Marie Bækvad-Hansen; Dewleen G Baker; Jean C Beckham; Laura J Bierut; Jonathan I Bisson; Marco P Boks; Elizabeth A Bolger; Anders D Børglum; Bekh Bradley; Megan Brashear; Gerome Breen; Richard A Bryant; Angela C Bustamante; Jonas Bybjerg-Grauholm; Joseph R Calabrese; José M Caldas-de-Almeida; Anders M Dale; Mark J Daly; Nikolaos P Daskalakis; Jürgen Deckert; Douglas L Delahanty; Michelle F Dennis; Seth G Disner; Katharina Domschke; Alma Dzubur-Kulenovic; Christopher R Erbes; Alexandra Evans; Lindsay A Farrer; Norah C Feeny; Janine D Flory; David Forbes; Carol E Franz; Sandro Galea; Melanie E Garrett; Bizu Gelaye; Elbert Geuze; Charles Gillespie; Aferdita Goci Uka; Scott D Gordon; Guia Guffanti; Rasha Hammamieh; Supriya Harnal; Michael A Hauser; Andrew C Heath; Sian M J Hemmings; David Michael Hougaard; Miro Jakovljevic; Marti Jett; Eric Otto Johnson; Ian Jones; Tanja Jovanovic; Xue-Jun Qin; Angela G Junglen; Karen-Inge Karstoft; Milissa L Kaufman; Ronald C Kessler; Alaptagin Khan; Nathan A Kimbrel; Anthony P King; Nastassja Koen; Henry R Kranzler; William S Kremen; Bruce R Lawford; Lauren A M Lebois; Catrin E Lewis; Sarah D Linnstaedt; Adriana Lori; Bozo Lugonja; Jurjen J Luykx; Michael J Lyons; Jessica Maples-Keller; Charles Marmar; Alicia R Martin; Nicholas G Martin; Douglas Maurer; Matig R Mavissakalian; Alexander McFarlane; Regina E McGlinchey; Katie A McLaughlin; Samuel A McLean; Sarah McLeay; Divya Mehta; William P Milberg; Mark W Miller; Rajendra A Morey; Charles Phillip Morris; Ole Mors; Preben B Mortensen; Benjamin M Neale; Elliot C Nelson; Merete Nordentoft; Sonya B Norman; Meaghan O'Donnell; Holly K Orcutt; Matthew S Panizzon; Edward S Peters; Alan L Peterson; Matthew Peverill; Robert H Pietrzak; Melissa A Polusny; John P Rice; Stephan Ripke; Victoria B Risbrough; Andrea L Roberts; Alex O Rothbaum; Barbara O Rothbaum; Peter Roy-Byrne; Ken Ruggiero; Ariane Rung; Bart P F Rutten; Nancy L Saccone; Sixto E Sanchez; Dick Schijven; Soraya Seedat; Antonia V Seligowski; Julia S Seng; Christina M Sheerin; Derrick Silove; Alicia K Smith; Jordan W Smoller; Scott R Sponheim; Dan J Stein; Jennifer S Stevens; Jennifer A Sumner; Martin H Teicher; Wesley K Thompson; Edward Trapido; Monica Uddin; Robert J Ursano; Leigh Luella van den Heuvel; Miranda Van Hooff; Eric Vermetten; Christiaan H Vinkers; Joanne Voisey; Yunpeng Wang; Zhewu Wang; Thomas Werge; Michelle A Williams; Douglas E Williamson; Sherry Winternitz; Christiane Wolf; Erika J Wolf; Jonathan D Wolff; Rachel Yehuda; Ross McD Young; Keith A Young; Hongyu Zhao; Lori A Zoellner; Israel Liberzon; Kerry J Ressler; Magali Haas; Karestan C Koenen
Journal:  Nat Commun       Date:  2019-10-08       Impact factor: 14.919

Review 7.  Cutting-edge genetics in obsessive-compulsive disorder.

Authors:  Helen Blair Simpson; Dan J Stein; Leonardo Cardoso Saraiva; Carolina Cappi; Biju Viswanath; Odile A van den Heuvel; Yc Janardhan Reddy; Euripedes C Miguel; Roseli G Shavitt
Journal:  Fac Rev       Date:  2020-12-23

8.  Genome-wide association analyses of post-traumatic stress disorder and its symptom subdomains in the Million Veteran Program.

Authors:  Murray B Stein; Joel Gelernter; Daniel F Levey; Zhongshan Cheng; Frank R Wendt; Kelly Harrington; Gita A Pathak; Kelly Cho; Rachel Quaden; Krishnan Radhakrishnan; Matthew J Girgenti; Yuk-Lam Anne Ho; Daniel Posner; Mihaela Aslan; Ronald S Duman; Hongyu Zhao; Renato Polimanti; John Concato
Journal:  Nat Genet       Date:  2021-01-28       Impact factor: 38.330

Review 9.  Robust Findings From 25 Years of PTSD Genetics Research.

Authors:  Laramie E Duncan; Bryna N Cooper; Hanyang Shen
Journal:  Curr Psychiatry Rep       Date:  2018-10-23       Impact factor: 5.285

10.  Attention-deficit hyperactivity disorder shares copy number variant risk with schizophrenia and autism spectrum disorder.

Authors:  Olafur O Gudmundsson; G Bragi Walters; Andres Ingason; Stefan Johansson; Tetyana Zayats; Lavinia Athanasiu; Ida Elken Sonderby; Omar Gustafsson; Muhammad S Nawaz; Gudbjorn F Jonsson; Lina Jonsson; Per-Morten Knappskog; Ester Ingvarsdottir; Katrin Davidsdottir; Srdjan Djurovic; Gun Peggy Strømstad Knudsen; Ragna Bugge Askeland; Gyda S Haraldsdottir; Gisli Baldursson; Pall Magnusson; Engilbert Sigurdsson; Daniel F Gudbjartsson; Hreinn Stefansson; Ole A Andreassen; Jan Haavik; Ted Reichborn-Kjennerud; Kari Stefansson
Journal:  Transl Psychiatry       Date:  2019-10-17       Impact factor: 6.222

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