| Literature DB >> 36106931 |
Taher Mahmoud1,2,3, Chaima Sahli1, Sondess Hadj Fredj1, Yessine Amri1, Rim Othmani1, Ghaber S Mohamed2, Ekhtelbenina Zein4, Taieb Messaoud1.
Abstract
BACKGROUND: Hemoglobinopathies, inherited disorders of hemoglobin (Hb), are the most common hereditary monogenic diseases of the red cell in the world. Few studies have been conducted on hemoglobinopathies in Mauritania. Therefore, the aim of this work is to establish the molecular and epidemiological basis of hemoglobinopathies in a cohort of Mauritanian patients and to determine the haplotype of the β-globin gene cluster in sickle cell subjects.Entities:
Keywords: haplotypes; hemoglobin (Hb) disorders; hemoglobinopathies; sickle cell disease (SCD); α-thalassemia; β-thalassemia
Mesh:
Substances:
Year: 2022 PMID: 36106931 PMCID: PMC9544207 DOI: 10.1002/mgg3.2048
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.473
FIGURE 1Geographical distribution of our patients in Mauritania
FIGURE 2Ethnic distribution of our Mauritanian patients
Allelic frequency of hemoglobin defects found in our sample study
| Hb defects | Number of alleles (%) |
|---|---|
| β−S | 55 (68.75) |
| β−Thal | 12 (15.0) |
| α−Thal | 3 (3.75) |
| β−A | 8 (10.0) |
| HbC | 1 (1.25) |
| Hb Siirt | 1 (1.25) |
Different mutations identified in our sample study and their ethnic origin (https://globin.bx.psu.edu/hbvar/menu.html)
| Mutations | Type | Number of alleles (%) | Ethnic origin |
|---|---|---|---|
| HBB:c.20A>T | Hb Variant | 55 (68.75) | Black American and Indian |
| HBB: c.135delC | β0 | 7 (8.75) | Oman, Tunisian, Bahraini… |
| HBB:c.‐79A>G | β+ | 4 (4.8) | Black & Chinese |
| NG_000006.1:g.34164_37967del3804 | α−thal−2 | 3 (3.75) | Indian, Far Eastern; African, Mediterranean |
| HBB:c.316‐2A>G | β0 | 2 (2.25) | African black |
| HBB:c.75T>A | β+ | 1 (1.25) | American black, Japanese |
| HBB:c.83C>G | Hb variant | 1 (1.25) | Kurdish |
| HBB:c.19G>A | Hb variant | 1 (1,25) | African black |
| rs10768683 (G>C) | SNP | 12 (15) | Indian |
| rs1609812 (C>T) | SNP | 8 (10) | Indian |
| rs713040 (T>C) | SNP | 6 (7.5) | Indian |
Abbreviations: Hb variant, hemoglobin variant; β+, a partial deficit of β‐globin chains synthesis; β0, a total deficit of β‐globin chains synthesis; SNP, Single Nucleotide Polymorphism; α−thal−2, alpha‐thalassemia type 2.
The hematological parameters of the different genotypes identified in our study
| Genotypes | Hb (g/dl) | MCH (pg) | MCV (fl) | Ht (%) | HbA (%) | HbA2 (%) | HbF (%) | HbS (%) | HbC (%) |
|
|---|---|---|---|---|---|---|---|---|---|---|
| βA/βS | 9.15 | 23.63 | 72.30 | 27.50 | 54.50 | 2.56 | 4.2 | 40.13 | 3 (7.5) | |
| βS/βS | 7.44 | 27.80 | 83.90 | 21.50 | 2.78 | 3.18 | 12.64 | 79.43 | 22 (55) | |
| βS/βC | 11.3 | 25 | 75 | 33 | 2.5 | 1.9 | 3.1 | 41.7 | 40.8 | 1 (2.5) |
| β−Thal/β−Thal | 6.50 | 24.5 | 69.30 | 15.4 | 36.65 | 5.95 | 40.8 | 2 (5) | ||
| βA/β−Thal | 9.38 | 21.23 | 74.4 | 12.33 | 70.08 | 5.51 | 18.00 | 0 | 7 (17.5) | |
| βS/β−Thal | 10.25 | 21.3 | 67.5 | 32.5 | 28.65 | 2.55 | 3.15 | 58.15 | 2 (5) | |
| βS/βS, αα/−− | 6.4 | 26.75 | 72.50 | 15 | 1.1 | 1.8 | 8.4 | 86.5 | 2(5) | |
| βA/βS, αα/−− | 10.30 | 19 | 61 | 33.0 | 47.10 | 1.2 | 0.70 | 33.80 | 1 (2.5) | |
| βA/βS | 9.15 | 23.63 | 72.30 | 27.50 | 54.50 | 2.56 | 4.2 | 40.13 | 3 (7.5) | |
| βS/βS | 7.44 | 27.80 | 83.90 | 21.50 | 2.78 | 3.18 | 12.64 | 79.43 | 22 (55) | |
| βS/βC | 11.3 | 25 | 75 | 33 | 2.5 | 1.9 | 3.1 | 41.7 | 40.8 | 1 (2.5) |
| β−Thal/β−Thal | 6.50 | 24.5 | 69.30 | 15.4 | 36.65 | 5.95 | 40.8 | 2 (5) | ||
| βA/β−Thal | 9.38 | 21.23 | 74.4 | 12.33 | 70.08 | 5.51 | 18.00 | 0 | 7 (17.5) | |
| βS/β−Thal | 10.25 | 21.3 | 67.5 | 32.5 | 28.65 | 2.55 | 3.15 | 58.15 | 2 (5) | |
| βS/βS, αα/−− | 6.4 | 26.75 | 72.50 | 15 | 1.1 | 1.8 | 8.4 | 86.5 | 2 (5) | |
| βA/βS, αα/−− | 10.30 | 19 | 61 | 33.0 | 47.10 | 1.2 | 0.70 | 33.80 | 1 (2,5) |
Abbreviations: Hb, hemoglobin; MCH, mean corpuscular hemoglobin; MCV, mean cell volume; Ht, hematocrite; HbA, hemoglobin A; HbA2, hemoglobina2; HbF, fetal hemoglobin; HbS, sickle hemoglobin; HbC, hemoglobin C.
Frequencies of restriction haplotypes established in sickle cell subjects
| Haplotypes | 3′‐ɛ Hinc II rs3834466 | 5′‐Gγ XmnI rs7482144 | Gγ HindIII rs2070972 | Aγ HindIII rs28440105 | Ψβ HincII rs10128556 | 3′ ψβ HincII rs968857 | β AvaII rs1076863 | 3′β BamHI no RSID |
|
|---|---|---|---|---|---|---|---|---|---|
| Senegal | − | + | + | − | + | + | + | + | 40 (66.7) |
| Benin | − | − | − | − | − | + | + | + | 6 (10) |
| Arab‐Indian | + | + | + | − | + | + | + | − | 4 (6.7) |
| Bantu | − | − | + | − | − | − | + | + | 2 (3.3) |
| Atypical 1 | − | + | + | − | + | − | + | + | 4 (6.7) |
| Atypical 2 | − | + | + | − | − | + | + | + | 4 (6.7) |
Abbreviations: +, presence of the SNP; −, absence of the SNP.
FIGURE 3Different haplotypes found in our cohort
The clinical and hematological data associated with different haplotypes established from sickle cell subjects
| Haplotypes | Hb (g/dl) | HbF (%) | HbS (%) | BT (%) | VOC (%) | SHM (%) |
|---|---|---|---|---|---|---|
| Senegal | 7.47 | 11.09 | 74.82 | 13.3 | 46.6 | 6.6 |
| Benin | 7.36 | 9.15 | 71.31 | 33.3 | 50.0 | 33.3 |
| Arabo‐Indian | 10 | 6.8 | 69.05 | 50.0 | 50.0 | 50.0 |
| Bantu | 7.10 | 20.33 | 76.7 | 0.0 | 50.0 | 0.0 |
| Atypical 1 | 8.10 | 5.45 | 56.35 | 0.0 | 50.0 | 0.0 |
| Atypical 2 | 9.50 | 19.00 | 69.6 | 0.0 | 50.0 | 0.0 |
Abbreviations: Hb, mean Hemoglobin level; HbF, mean level of fetal hemoglobin; HbS, mean level of hemoglobin S; BT, blood transfusion frequency; VOC, vaso‐occlusive crises frequency; SHM, spleno‐hepato‐megaly frequency.
| Patients | Age (an) | Sex | Ethnic group | Origin | Hb g/dl | MCV (fl) | MCH Pg | Ht (%) | A (%) | (A2%) | F (%) | S (%) | C (%) | Clinical signs | Genotypes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 13 | F | Heratin | Gorgol | 8.1 | 62.4 | 21.5 | 23.49 | 45 | 4.4 | 17.4 | MA and BT | β−Thal/β−Thal | ||
| 2 | 3 | F | Heratin | Gorgol | 10.2 | 68.8 | 15 | 19.10 | 77.9 | 5.7 | 5.4 | MA | βA/β−Thal | ||
| 3 | 4 | M | Heratin | Gorgol | 5.4 | 68.8 | 23.8 | 15.64 | 68.4 | 3.3 | 11 | SA and SHM | βA/β−Thal | ||
| 4 | 14 | M | Heratin | Noukchott | 4.9 | 76.2 | 27.5 | 7.30 | 28.3 | 7.5 | 64.2 | AS, BT, and SHM | β−Thal/β−Thal | ||
| 5 | 6 | M | Pular | Trarza | 9.5 | 67 | 21.9 | 29 | 35.6 | 2 | 4.8 | 45.9 | MA and VOC | βS/β−Thal | |
| 6 | 16 | M | Heratin | – | 7.4 | 103 | 32.9 | 22.6 | 26 | 4.2 | 51.1 | MA and SHM | βA/β−Thal (Hb Siirt) | ||
| 7 | 15 | M | Heratin | Assaba | 11 | 68 | 20.7 | 36 | 21.7 | 3.1 | 1.5 | 70.4 | MA and BT | βS/β−Thal | |
| 8 | 7 | F | – | 12 | 68 | 20.3 | – | 94.3 | 5.7 | MA | βA/β−Thal | ||||
| 9 | 29 | M | Soninke | – | 13.4 | 67.8 | 21.4 | – | 89 | 7.4 | 3.6 | βA/β−Thal | |||
| 10 | 19 | M | Pular | – | 8.3 | 70 | 14 | – | 61.9 | 6 | 32.9 | MA | βA/β−Thal | ||
| 11 | 5 | M | Soninke | GuidiMaka | 5.4 | 84 | 29.8 | 15 | 2.2 | 1.7 | 16.8 | 75 | SA and SHM | βS/βS, αα/α‐Thal | |
| 12 | 3 | F | Pular | Gorgol | 8.4 | 83 | 27.1 | 26 | 0 | 3 | 26.7 | 70.3 | AM, BT, and VOC | βS/βS | |
| 13 | 10 | F | Pular | Brakna | 8.3 | 61.2 | 21.7 | 11 | 2.3 | 1.6 | 8.3 | 83.6 | AM, BT, VOC, and SHM | βS/βS | |
| 14 | 13 | F | Pular | Gorgol | 8.6 | 86.8 | 29.7 | 25 | 21.8 | 2.7 | 6 | 62.5 | MA and BT | βS/βS | |
| 15 | 11 | F | Heratin | Gorgol | 5.8 | 88.7 | 28.2 | 18.20 | 0 | 3 | 23.4 | 73.6 | SA, BT, and VOC | βS/βS | |
| 16 | 5 | F | Pular | H.Chargui | 7.3 | 72.8 | 23.2 | 23.02 | 53.3 | 2.6 | 8.4 | 35.7 | MA and SHM | βA/βS | |
| 17 | 7 | M | Heratin | Nouakchott | 7.4 | 61 | 23.7 | – | 0 | 2 | 0 | 98 | MA | βS/βS, αα/αThal | |
| 18 | 8 | M | Pular | Nouakchott | 7.7 | 78 | 26 | 14 | 0 | 2.4 | 30.8 | 66.8 | MA and VOC | βS/βS | |
| 19 | 10 | M | Pular | Trarza | 10.3 | 33.4 | – | 0 | 3.2 | 12.1 | 84.7 | MA | βS/βS | ||
| 20 | 15 | M | Heratin | Brakna | 8.1 | 96 | 31.2 | 25 | 3.1 | 1 | 10.9 | 76 | MA and VOC | βS/βS | |
| 21 | 15 | M | Bidan | Nouakchott | 11 | 71.3 | 23.7 | – | 50 | 2 | 48 | MA | βA/βS | ||
| 22 | 14 | M | Heratin | Nouakchott | 8.2 | 93 | 33 | 23 | 0 | 3.4 | 6.8 | 89.8 | MA and VOC | βS/βS | |
| 23 | 9 | M | Heratin | Nouakchott | 3.3 | 70 | 18.9 | 12 | 4.9 | 5.2 | 0 | 89.9 | SA | βS/βS | |
| 24 | 9 | M | Heratin | Trarza | 4.3 | 76 | 19.6 | – | 0 | 4.3 | 3.4 | 92.3 | SA, BT, and SHM | βS/βS | |
| 25 | 4 | M | Heratin | Gorgol | 9 | 82 | 30 | – | 0 | 2.9 | 20.9 | 76.2 | MA, BT, and VOC | βS/βS | |
| 26 | 15 | F | Pular | Trarza | – | 0 | 3.1 | 6.8 | 90.1 | MA, BT, and VOC | βS/βS | ||||
| 27 | 6 | F | Pular | Gorgol | 7.3 | 88.6 | 31 | 20.80 | 13.8 | 1.3 | 5.5 | 65.9 | MA, BT, and VOC | βS/βS | |
| 28 | 8 | M | Pular | Brakna | 10.3 | 61 | 19.1 | 23 | 47.1 | 1.2 | 0.7 | 33.8 | MA | βA/βS, αα/α‐Thal | |
| 29 | 11 | M | Heratin | Assaba | 11.3 | 75 | 25 | 33 | 2.5 | 1.9 | 3.1 | 41.7 | 40.8 | MA | βS/βC |
| 30 | 8 | M | Bidan | Tris‐Zemour | 10 | 102 | 33.2 | 30.10 | 2.7 | 0.3 | 26.2 | 62 | MA and VOC. | βS/βS | |
| 31 | 5 | F | Bidan | Adrar | 9.5 | 96.6 | 33.6 | 27 | 0 | 2.4 | 18.4 | 79.2 | MA and VOC. | βS/βS | |
| 32 | Heratin | Nouadhibou | – | 84 | 2.8 | 0.8 | βA/β‐Thal | ||||||||
| 33 | 12 | F | Pular | Brakna | 2.9 | 73 | 22.5 | – | 0.3 | 11 | 19 | 69.6 | SA and BT | βS/βS | |
| 34 | 13 | M | Pular | Trarza | 6.8 | 89 | 29.5 | 18.90 | 12.3 | 3.2 | 5.1 | 79.4 | SA, BT, and VOC | βS/βS | |
| 35 | 1 | M | Pular | Brakna | 5.4 | 92 | 28.5 | 17 | 0 | 2.8 | 14.3 | 82 | SA, BT, and VOC | βS/βS | |
| 36 | 22 | F | Wolef | Nouakchott | 72.8 | 24 | 32 | 60.2 | 3.1 | 0 | 36.7 | βA/βS | |||
| 37 | 11 | F | Heratin | Gorgol | 6.8 | 89 | 28.5 | 21 | 0 | 3.9 | 5.7 | 90.4 | SA, BT, and VOC | βS/βS | |
| 38 | 11 | M | Bidan | Adrar | 6.4 | 96 | 31.4 | – | 0 | 3 | 7.9 | 89.1 | SA, BT, andVOC | βS/βS | |
| 39 | 8 | F | Heratin | Trarza | 7.7 | 82.3 | 26 | – | 0 | 3.1 | 12.2 | 84.7 | AM | βS/βS | |
| 40 | 14 | M | Heratin | Trarza | 8.3 | 79.4 | 29.7 | – | 0 | 3.2 | 7.8 | 89 | AM | βS/βS |
Abbreviations: F, female; M, male; Origin, Mauritanian cities; Hb, hemoglobin; MCH, mean corpuscular hemoglobin; MCV, mean corpuscular volume; Ht, hematocrite; A, A2, F, S, and C, hemoglobin fractions; MA, moderate anemia; SA, severe anemia; BT, blood transfusion. VOC, vaso‐occlusive crises, SHM, Spleno‐Hepato‐Megaly; −, unidentified origin.