Literature DB >> 36106891

Complete Genome Sequences of Four Campylobacter jejuni Strains Isolated from Retail Chicken Meat and Broiler Feces.

Sabin Poudel1, Tianmin Li1,2, Mark A Arick3, Chuan-Yu Hsu3, Adam Thrash3, Anuraj T Sukumaran1, Pratima Adhikari1, Aaron S Kiess4, Li Zhang1.   

Abstract

Campylobacter jejuni is the leading pathogen that causes foodborne infections. Here, we report the complete genome sequences of four C. jejuni strains isolated from retail chicken meat and broiler feces samples. Genes encoding type VI secretion and antibiotic resistance were detected among these isolates.

Entities:  

Year:  2022        PMID： 36106891      PMCID： PMC9583806          DOI： 10.1128/mra.00898-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  18 in total

1.  Estimates of enteric illness attributable to contact with animals and their environments in the United States.

Authors:  Christa R Hale; Elaine Scallan; Alicia B Cronquist; John Dunn; Kirk Smith; Trisha Robinson; Sarah Lathrop; Melissa Tobin-D'Angelo; Paula Clogher
Journal:  Clin Infect Dis       Date:  2012-06       Impact factor: 9.079

2.  SecReT6: a web-based resource for type VI secretion systems found in bacteria.

Authors:  Jun Li; Yufeng Yao; H Howard Xu; Limin Hao; Zixin Deng; Kumar Rajakumar; Hong-Yu Ou
Journal:  Environ Microbiol       Date:  2015-07       Impact factor: 5.491

3.  Minimap2: pairwise alignment for nucleotide sequences.

Authors:  Heng Li
Journal:  Bioinformatics       Date:  2018-09-15       Impact factor: 6.937

4.  Comparative analysis of antimicrobial resistance and genetic diversity of Campylobacter from broilers slaughtered in Poland.

Authors:  Kinga Wieczorek; Edyta Denis; Jacek Osek
Journal:  Int J Food Microbiol       Date:  2015-06-11       Impact factor: 5.277

5.  Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.

Authors:  Bruce J Walker; Thomas Abeel; Terrance Shea; Margaret Priest; Amr Abouelliel; Sharadha Sakthikumar; Christina A Cuomo; Qiandong Zeng; Jennifer Wortman; Sarah K Young; Ashlee M Earl
Journal:  PLoS One       Date:  2014-11-19       Impact factor: 3.240

6.  Circlator: automated circularization of genome assemblies using long sequencing reads.

Authors:  Martin Hunt; Nishadi De Silva; Thomas D Otto; Julian Parkhill; Jacqueline A Keane; Simon R Harris
Journal:  Genome Biol       Date:  2015-12-29       Impact factor: 13.583

7.  Molecular characterization of Campylobacter causing human clinical infection using whole-genome sequencing: Virulence, antimicrobial resistance and phylogeny in Ireland.

Authors:  Natalia Redondo; Anne Carroll; Eleanor McNamara
Journal:  PLoS One       Date:  2019-07-10       Impact factor: 3.240

8.  Prevalence, Antimicrobial Resistance, and Molecular Characterization of Campylobacter Isolated from Broilers and Broiler Meat Raised without Antibiotics.

Authors:  Sabin Poudel; Tianmin Li; Saijuan Chen; Xue Zhang; Wen-Hsing Cheng; Anuraj T Sukumaran; Aaron S Kiess; Li Zhang
Journal:  Microbiol Spectr       Date:  2022-05-10

9.  Tracing the source of campylobacteriosis.

Authors:  Daniel J Wilson; Edith Gabriel; Andrew J H Leatherbarrow; John Cheesbrough; Steven Gee; Eric Bolton; Andrew Fox; Paul Fearnhead; C Anthony Hart; Peter J Diggle
Journal:  PLoS Genet       Date:  2008-09-26       Impact factor: 5.917

10.  CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.

Authors:  Brian P Alcock; Amogelang R Raphenya; Tammy T Y Lau; Kara K Tsang; Mégane Bouchard; Arman Edalatmand; William Huynh; Anna-Lisa V Nguyen; Annie A Cheng; Sihan Liu; Sally Y Min; Anatoly Miroshnichenko; Hiu-Ki Tran; Rafik E Werfalli; Jalees A Nasir; Martins Oloni; David J Speicher; Alexandra Florescu; Bhavya Singh; Mateusz Faltyn; Anastasia Hernandez-Koutoucheva; Arjun N Sharma; Emily Bordeleau; Andrew C Pawlowski; Haley L Zubyk; Damion Dooley; Emma Griffiths; Finlay Maguire; Geoff L Winsor; Robert G Beiko; Fiona S L Brinkman; William W L Hsiao; Gary V Domselaar; Andrew G McArthur
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971
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