Literature DB >> 36094722

Deep learning approaches based improved light weight U-Net with attention module for optic disc segmentation.

R Shalini1, Varun P Gopi2.   

Abstract

Glaucoma is a major cause of blindness worldwide, and its early detection is essential for the timely management of the condition. Glaucoma-induced anomalies of the optic nerve head may cause variation in the Optic Disc (OD) size. Therefore, robust OD segmentation techniques are necessary for the screening for glaucoma. Computer-aided segmentation has become a promising diagnostic tool for the early detection of glaucoma, and there has been much interest in recent years in using neural networks for medical image segmentation. This study proposed an enhanced lightweight U-Net model with an Attention Gate (AG) to segment OD images. We also used a transfer learning strategy to extract relevant features using a pre-trained EfficientNet-B0 CNN, which preserved the receptive field size and AG, which reduced the impact of gradient vanishing and overfitting. Additionally, the neural network trained using the binary focal loss function improved segmentation accuracy. The pre-trained Attention U-Net was validated using publicly available datasets, such as DRIONS-DB, DRISHTI-GS, and MESSIDOR. The model significantly reduced parameter quantity by around 0.53 M and had inference times of 40.3 ms, 44.2 ms, and 60.6 ms, respectively.
© 2022. Australasian College of Physical Scientists and Engineers in Medicine.

Entities:  

Keywords:  Attention U-Net; Deep learning; EfficientNet; Optic disc; Transfer learning; segmentation

Year:  2022        PMID: 36094722     DOI: 10.1007/s13246-022-01178-4

Source DB:  PubMed          Journal:  Phys Eng Sci Med        ISSN: 2662-4729


  22 in total

1.  Achieving the way for automated segmentation of nuclei in cancer tissue images through morphology-based approach: a quantitative evaluation.

Authors:  S Di Cataldo; E Ficarra; A Acquaviva; E Macii
Journal:  Comput Med Imaging Graph       Date:  2010-01-08       Impact factor: 4.790

2.  DeepLab: Semantic Image Segmentation with Deep Convolutional Nets, Atrous Convolution, and Fully Connected CRFs.

Authors:  Liang-Chieh Chen; George Papandreou; Iasonas Kokkinos; Kevin Murphy; Alan L Yuille
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2017-04-27       Impact factor: 6.226

3.  SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation.

Authors:  Vijay Badrinarayanan; Alex Kendall; Roberto Cipolla
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2017-01-02       Impact factor: 6.226

4.  A self-calibrating approach for the segmentation of retinal vessels by template matching and contour reconstruction.

Authors:  György Kovács; András Hajdu
Journal:  Med Image Anal       Date:  2015-12-19       Impact factor: 8.545

5.  Robust optic disc and cup segmentation with deep learning for glaucoma detection.

Authors:  Shuang Yu; Di Xiao; Shaun Frost; Yogesan Kanagasingam
Journal:  Comput Med Imaging Graph       Date:  2019-04-05       Impact factor: 4.790

6.  Automated CT bone segmentation using statistical shape modelling and local template matching.

Authors:  Elham Taghizadeh; Alexandre Terrier; Fabio Becce; Alain Farron; Philippe Büchler
Journal:  Comput Methods Biomech Biomed Engin       Date:  2019-09-04       Impact factor: 1.763

Review 7.  The pathophysiology and treatment of glaucoma: a review.

Authors:  Robert N Weinreb; Tin Aung; Felipe A Medeiros
Journal:  JAMA       Date:  2014-05-14       Impact factor: 56.272

Review 8.  Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: a review.

Authors:  Muhammad Salman Haleem; Liangxiu Han; Jano van Hemert; Baihua Li
Journal:  Comput Med Imaging Graph       Date:  2013-09-27       Impact factor: 4.790

9.  Joint Optic Disc and Cup Segmentation Based on Multi-Label Deep Network and Polar Transformation.

Authors:  Huazhu Fu; Jun Cheng; Yanwu Xu; Damon Wing Kee Wong; Jiang Liu; Xiaochun Cao
Journal:  IEEE Trans Med Imaging       Date:  2018-07       Impact factor: 10.048

10.  Localization and segmentation of optic disc in retinal images using circular Hough transform and grow-cut algorithm.

Authors:  Muhammad Abdullah; Muhammad Moazam Fraz; Sarah A Barman
Journal:  PeerJ       Date:  2016-05-10       Impact factor: 2.984

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