| Literature DB >> 36090736 |
Adriana Łukasik1, Karolina Kozicka1, Aleksandra Pisarek2, Anna Wojas-Pelc1.
Abstract
Introduction: Androgenetic alopecia is the most common type of non-cicatricial alopecia both in male and female patients. The mechanism that leads to hair loss is similar in both sexes, but the underlying cause, and especially the role of genes and sex hormones in the pathogenesis of the disease in women has not fully been explained as of yet. So far, a few attempts have been made to assess selected SNPs for CYP19A1 and ESR2 genes, but their results are not unequivocal and fully reproducible. Aim: To investigate the association of 13 CYP19A1 and 11 ESR2 gene SNPs with female androgenetic alopecia (FAGA) in a population of Polish patients, including some already genotyped SNPs of possible importance for FAGA pathophysiology in other populations. Material and methods: Twenty-four genetic polymorphisms were analysed for the ESR2 and CYP19A1 genes in 117 patients with FAGA and 128 healthy subjects treated at the Department of Dermatology in Krakow.Entities:
Keywords: CYP19A1gene; ESR2 gene; female pattern hair loss; single nucleotide polymorphisms
Year: 2021 PMID: 36090736 PMCID: PMC9454345 DOI: 10.5114/ada.2021.108429
Source DB: PubMed Journal: Postepy Dermatol Alergol ISSN: 1642-395X Impact factor: 1.664
Number of patients with particular grades of hair loss according to the Sinclair scale
| Sinclair scale | Number of FAGA patients ( |
|---|---|
| 1 | 1 |
| 2 | 38 |
| 3 | 33 |
| 4 | 30 |
| 5 | 15 |
Data for the SNP positions under study
| SNP | Gene | GRCh38 | Allele variants | MAF | Role | Gene consequence | Assay ID |
|---|---|---|---|---|---|---|---|
| rs1152578 |
| chr14:64230319 | T/C | T 0.424 | Not reported | Intron variant | C___1436977_10 |
| rs1256065 |
| chr14:64232214 | G/T | G 0.431 | Associated with bone mineral density [ | Intron variant | C___1436975_10 |
| rs8006145 |
| chr14:64232732 | C/A | A 0.245 | Prostate volume [ | Intron variant | C__29383989_10 |
| rs867443 |
| chr14:64234324 | G/A | A 0.238 | Not reported | Intron variant | C___1436972_20 |
| rs17766755 |
| chr14:64249055 | G/A | A 0.327 | Benign prostatic hyperplasia [ | Intron variant | C__34495232_10 |
| rs4365213 |
| chr14:64253546 | T/C | C 0.412 | Alzheimer disease in women with Down syndrome [ | Intron variant | C__32395442_20 |
| rs6573549 |
| chr14:64254931 | T/C | C 0.422 | Not reported | Intron variant | C__32091355_10 |
| rs61984409 |
| chr14:64263303 | A/C | C 0.333 | Not reported | Intron variant | C__90266873_10 |
| rs7154455 |
| chr14:64269942 | G/C | C 0.290 | Not reported | Intron variant | C__29383994_10 |
| rs960069 |
| chr14:64278284 | C/T | C 0.443 | Not reported | Intron variant | C___1436935_10 |
| rs10137185 |
| chr14:64309058 | C/T | T 0.100 | Associated with FPHL [ | Intron variant | C__29621308_10 |
| rs934634 |
| chr15:51208341 | C/T | T 0.190 | Not reported | Intron variant, 3 prime UTR variant | C___8794656_10 |
| rs2255192 |
| chr15:51208638 | C/T | T 0.189 | Not reported | Intron variant, 3 prime UTR variant | C__15798398_10 |
| rs4275794 |
| chr15:51208920 | T/C | C 0.190 | Not reported | Intron variant, 3 prime UTR Variant | C__32394041_10 |
| rs12148604 |
| chr15:51209207 | C/T | C 0.424 | Associated with sex hormone levels (estrone) [ | Intron variant, 3 prime UTR variant | C__32071398_10 |
| rs4646 |
| chr15:51210647 | A/C | A 0.230 | Associated with FPHL, premature ovarian failure [ | Intron variant, 3 prime UTR variant | C___8234730_1_ |
| rs10046 |
| chr15:51210789 | G/A | G 0.422 | Associated with miscarriages [ | Intron variant, 3 prime UTR variant | C___8234731_30 |
| rs2899470 |
| chr15:51211480 | T/G | T 0.348 | Serum oestrogen and oestrogen/testosterone ratio [ | Intron variant | C___8234732_10 |
| rs12591172 |
| chr15:51211530 | G/A | G 0.420 | Not reported | Intron variant | C___8234742_10 |
| rs8029120 |
| chr15:51212737 | T/G | T 0.410 | Not reported | Intron variant | C___8234756_10 |
| rs749292 |
| chr15:51266534 | G/A | A 0.500 | Associated with ovarian cancer [ | Intron variant | C___8801261_20 |
| rs6493497 |
| chr15:51338638 | G/A | A 0.092 | Associated with FPHL [ | Upstream variant | C__29374681_10 |
| rs7176005 |
| chr15:51339082 | C/T | T 0.092 | Associated with FPHL [ | Upstream variant | C_189237142_10 |
| rs752760 |
| chr15:51339282 | C/T | T 0.385 | Not reported | Upstream variant | C____798312_10 |
MAF – minor allele frequency, SNP – single nucleotide polymorphism, FAGA – female androgenetic alopecia.
Results of association analysis between individual SNP positions and FAGA
| SNP | Gene | OR (95% CI) | |
|---|---|---|---|
| rs1152578 |
| 1.092 (0.755–1.581) | 0.640 |
| rs1256065 |
| 1.153 (0.799–1.665) | 0.446 |
| rs8006145 |
| 0.883 (0.561–1.391) | 0.592 |
| rs867443 |
| 0.941 (0.597–1.483) | 0.793 |
| rs17766755 |
| 1.070 (0.713–1.607) | 0.743 |
| rs4365213 |
| 0.992 (0.685–1.436) | 0.967 |
| rs6573549 |
| 1.007 (0.699–1.452) | 0.969 |
| rs61984409 |
| 0.966 (0.648–1.441) | 0.865 |
| rs7154455 |
| 0.870 (0.563–1.346) | 0.533 |
| rs960069 |
| 1.124 (0.776–1.628) | 0.535 |
| rs10137185 |
| 0.892 (0.502–1.584) | 0.697 |
| rs934634 |
| 1.151 (0.728–1.820) | 0.547 |
| rs2255192 |
| 1.073 (0.678–1.698) | 0.763 |
| rs4275794 |
| 1.032 (0.653–1.630) | 0.894 |
| rs12148604 |
| 0.917 (0.636–1.323) | 0.645 |
| rs4646 |
| 0.860 (0.554–1.335) | 0.501 |
| rs10046 |
| 0.970 (0.671–1.401) | 0.870 |
| rs2899470 |
| 0.980 (0.660–1.455) | 0.919 |
| rs12591172 |
| 0.947 (0.654–1.371) | 0.771 |
| rs8029120 |
| 0.893 (0.607–1.314) | 0.566 |
| rs749292 |
| 1.171 (0.824–1.663) | 0.378 |
| rs6493497 |
| 1.396 (0.762–2.558) | 0.280 |
| rs7176005 |
| 1.404 (0.766–2.574) | 0.272 |
| rs752760 |
| 0.987 (0.678–1.438) | 0.947 |
CI – confidence interval, OR – odds ratio, SNP – single nucleotide polymorphism.
Results of association analysis between individual SNP positions and FAGA for a recessive model of allele classification
| SNP | Gene | OR (95% CI) | |
|---|---|---|---|
| rs1152578 |
| 0.833 (0.424–1.638) | 0.597 |
| rs1256065 |
| 0.948 (0.490–1.836) | 0.875 |
| rs8006145 |
| 0.439 (0.083–2.311) | 0.331 |
| rs867443 |
| 0.444 (0.084–2.340) | 0.338 |
| rs17766755 |
| 1.013 (0.395–2.600) | 0.978 |
| rs4365213 |
| 1.090 (0.544–2.184) | 0.808 |
| rs6573549 |
| 1.048 (0.535–2.053) | 0.890 |
| rs61984409 |
| 0.826 (0.334–2.047) | 0.680 |
| rs7154455 |
| 0.411 (0.105–1.605) | 0.201 |
| rs960069 |
| 0.904 (0.469–1.742) | 0.762 |
| rs10137185 |
| 0.350 (0.036–3.417) | 0.366 |
| rs934634 |
| 1.844 (0.430–7.909) | 0.410 |
| rs2255192 |
| 1.860 (0.434–7.981) | 0.404 |
| rs4275794 |
| 1.844 (0.430–7.909) | 0.410 |
| rs12148604 |
| 0.797 (0.408–1.560) | 0.509 |
| rs4646 |
| 0.734 (0.202–2.673) | 0.640 |
| rs10046 |
| 0.939 (0.479–1.840) | 0.854 |
| rs2899470 |
| 0.960 (0.410–2.248) | 0.924 |
| rs12591172 |
| 0.887 (0.449–1.754) | 0.730 |
| rs8029120 |
| 0.648 (0.308–1.366) | 0.254 |
| rs749292 |
| 1.082 (0.610–1.921) | 0.787 |
| rs6493497 |
| 2.390 (0.212–26.988) | 0.481 |
| rs7176005 |
| 2.390 (0.212–26.988) | 0.481 |
| rs752760 |
| 1.621 (0.771–3.410) | 0.203 |
CI – confidence interval, OR – odds ratio, SNP – single nucleotide polymorphism.
Results of association analysis between individual SNP positions and FAGA for a dominant model of allele classification
| SNP | Gene | OR (95% CI) | |
|---|---|---|---|
| rs1152578 |
| 1.361 (0.790–2.346) | 0.267 |
| rs1256065 |
| 1.421 (0.822–2.456) | 0.208 |
| rs8006145 |
| 0.935 (0.565–1.547) | 0.793 |
| rs867443 |
| 1.010 (0.609–1.674) | 0.971 |
| rs17766755 |
| 1.108 (0.666–1.843) | 0.692 |
| rs4365213 |
| 0.935 (0.549–1.594) | 0.806 |
| rs6573549 |
| 0.985 (0.576–1.685) | 0.957 |
| rs61984409 |
| 1.005 (0.604–1.671) | 0.986 |
| rs7154455 |
| 0.954 (0.576–1.579) | 0.855 |
| rs960069 |
| 1.399 (0.801–2.442) | 0.238 |
| rs10137185 |
| 0.957 (0.500–1.831) | 0.894 |
| rs934634 |
| 1.109 (0.654–1.878) | 0.702 |
| rs2255192 |
| 1.008 (0.594–1.712) | 0.975 |
| rs4275794 |
| 0.958 (0.566–1.624) | 0.874 |
| rs12148604 |
| 0.961 (0.561–1.646) | 0.885 |
| rs4646 |
| 0.856 (0.513–1.428) | 0.552 |
| rs10046 |
| 0.975 (0.570–1.668) | 0.926 |
| rs2899470 |
| 0.980 (0.587–1.639) | 0.940 |
| rs12591172 |
| 0.960 (0.561–1.644) | 0.881 |
| rs8029120 |
| 1.012 (0.590–1.735) | 0.965 |
| rs749292 |
| 1.416 (0.792–2.529) | 0.240 |
| rs6493497 |
| 1.401 (0.719–2.733) | 0.322 |
| rs7176005 |
| 1.410 (0.723–2.750) | 0.313 |
| rs752760 |
| 0.765 (0.454–1.292) | 0.317 |
CI – confidence interval, OR – odds ratio, SNP – single nucleotide polymorphism.