Literature DB >> 11125122

dbSNP: the NCBI database of genetic variation.

S T Sherry1, M H Ward, M Kholodov, J Baker, L Phan, E M Smigielski, K Sirotkin.   

Abstract

In response to a need for a general catalog of genome variation to address the large-scale sampling designs required by association studies, gene mapping and evolutionary biology, the National Center for Biotechnology Information (NCBI) has established the dbSNP database [S.T.Sherry, M.Ward and K. Sirotkin (1999) Genome Res., 9, 677-679]. Submissions to dbSNP will be integrated with other sources of information at NCBI such as GenBank, PubMed, LocusLink and the Human Genome Project data. The complete contents of dbSNP are available to the public at website: http://www.ncbi.nlm.nih.gov/SNP. The complete contents of dbSNP can also be downloaded in multiple formats via anonymous FTP at ftp://ncbi.nlm.nih.gov/snp/.

Entities:  

Mesh:

Year:  2001        PMID: 11125122      PMCID: PMC29783          DOI: 10.1093/nar/29.1.308

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Prospects for whole-genome linkage disequilibrium mapping of common disease genes.

Authors:  L Kruglyak
Journal:  Nat Genet       Date:  1999-06       Impact factor: 38.330

2.  Shattuck lecture--medical and societal consequences of the Human Genome Project.

Authors:  F S Collins
Journal:  N Engl J Med       Date:  1999-07-01       Impact factor: 91.245

3.  As consortium plans free SNP map of human genome.

Authors:  E Masood
Journal:  Nature       Date:  1999-04-15       Impact factor: 49.962

4.  Reliable identification of large numbers of candidate SNPs from public EST data.

Authors:  K H Buetow; M N Edmonson; A B Cassidy
Journal:  Nat Genet       Date:  1999-03       Impact factor: 38.330

5.  HGBASE: a database of SNPs and other variations in and around human genes.

Authors:  A J Brookes; H Lehväslaiho; M Siegfried; J G Boehm; Y P Yuan; C M Sarkar; P Bork; F Ortigao
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 6.  High throughput analysis of differential gene expression.

Authors:  J P Carulli; M Artinger; P M Swain; C D Root; L Chee; C Tulig; J Guerin; M Osborne; G Stein; J Lian; P T Lomedico
Journal:  J Cell Biochem Suppl       Date:  1998

Review 7.  The DNA revolution in population genetics.

Authors:  L L Cavalli-Sforza
Journal:  Trends Genet       Date:  1998-02       Impact factor: 11.639

  7 in total
  2000 in total

1.  PharmGKB: the Pharmacogenetics Knowledge Base.

Authors:  Micheal Hewett; Diane E Oliver; Daniel L Rubin; Katrina L Easton; Joshua M Stuart; Russ B Altman; Teri E Klein
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  JSNP: a database of common gene variations in the Japanese population.

Authors:  Mika Hirakawa; Toshihiro Tanaka; Yoichi Hashimoto; Masako Kuroda; Toshihisa Takagi; Yusuke Nakamura
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

3.  The Gene Resource Locator: gene locus maps for transcriptome analysis.

Authors:  Toshihiko Honkura; Jun Ogasawara; Tomoyuki Yamada; Shinichi Morishita
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

4.  HOWDY: an integrated database system for human genome research.

Authors:  Mika Hirakawa
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

5.  Accounting for human polymorphisms predicted to affect protein function.

Authors:  Pauline C Ng; Steven Henikoff
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

Review 6.  The challenges of recording phenotype in a generalizable and computable form.

Authors:  P M Nadkarni
Journal:  Pharmacogenomics J       Date:  2003       Impact factor: 3.550

7.  GALA, a database for genomic sequence alignments and annotations.

Authors:  Belinda Giardine; Laura Elnitski; Cathy Riemer; Izabela Makalowska; Scott Schwartz; Webb Miller; Ross C Hardison
Journal:  Genome Res       Date:  2003-04       Impact factor: 9.043

8.  Genotyping of single nucleotide polymorphisms by 5' nuclease allelic discrimination.

Authors:  Mari Malkki; Effie W Petersdorf
Journal:  Methods Mol Biol       Date:  2012

9.  Standard methods for the management of immunogenetic data.

Authors:  Pierre-Antoine Gourraud; Jill A Hollenbach; Thomas Barnetche; Richard M Single; Steven J Mack
Journal:  Methods Mol Biol       Date:  2012

10.  Biallelic Mutations in MRPS34 Lead to Instability of the Small Mitoribosomal Subunit and Leigh Syndrome.

Authors:  Nicole J Lake; Bryn D Webb; David A Stroud; Tara R Richman; Benedetta Ruzzenente; Alison G Compton; Hayley S Mountford; Juliette Pulman; Coralie Zangarelli; Marlene Rio; Nathalie Boddaert; Zahra Assouline; Mingma D Sherpa; Eric E Schadt; Sander M Houten; James Byrnes; Elizabeth M McCormick; Zarazuela Zolkipli-Cunningham; Katrina Haude; Zhancheng Zhang; Kyle Retterer; Renkui Bai; Sarah E Calvo; Vamsi K Mootha; John Christodoulou; Agnes Rötig; Aleksandra Filipovska; Ingrid Cristian; Marni J Falk; Metodi D Metodiev; David R Thorburn
Journal:  Am J Hum Genet       Date:  2017-08-03       Impact factor: 11.025

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.