| Literature DB >> 36080485 |
Md Yousof Ali1,2, Gerald W Zamponi1, Su Hui Seong3, Hyun Ah Jung4, Jae Sue Choi2.
Abstract
Over the years, great attention has been paid to coumarin derivatives, a set of versatile molecules that exhibit a wide variety of biological activities and have few toxic side effects. In this study, we investigated the antidiabetic potential of 6-formyl umbelliferone (6-FU), a novel furanocoumarin isolated from Angelica decursiva. Numerous pharmacological activities of 6-FU have been previously reported; however, the mechanism of its antidiabetic activity is unknown. Therefore, we examined the action of 6-FU on a few candidate-signaling molecules that may underlie its antidiabetic activity, including its inhibition of protein tyrosine phosphatase 1B (PTP1B), α-glucosidase, human recombinant aldose reductase (HRAR), and advanced glycation end-product (AGE) formation (IC50 = 1.13 ± 0.12, 58.36 ± 1.02, 5.11 ± 0.21, and 2.15 ± 0.13 μM, respectively). A kinetic study showed that 6-FU exhibited mixed-type inhibition against α-glucosidase and HRAR and competitive inhibition of PTP1B. Docking simulations of 6-FU demonstrated negative binding energies and close proximity to residues in the binding pockets of those enzymes. We also investigated the molecular mechanisms underlying 6-FU's antidiabetic effects. 6-FU significantly increased glucose uptake and decreased PTP1B expression in insulin-resistant C2C12 skeletal muscle cells. Moreover, 6-FU (0.8-100 μM) remarkably inhibited the formation of fluorescent AGEs in glucose-fructose-induced human serum albumin glycation over the course of 4 weeks. The findings clearly indicate that 6-FU will be useful in the development of multiple target-oriented therapeutic modalities for the treatment of diabetes and diabetes-related complications.Entities:
Keywords: 6-FU; advanced glycation end-products; antidiabetic potentials; glucose uptake; kinetics; molecular docking
Mesh:
Substances:
Year: 2022 PMID: 36080485 PMCID: PMC9458250 DOI: 10.3390/molecules27175720
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.927
Inhibitory effects and enzyme kinetic analysis of 6-FU on protein tyrosine phosphatase 1B (PTP1B), α-glucosidase, human recombinant aldose reductase (HRAR), and advanced glycation end-product (AGE).
| IC50 (µM) a | ||||
|---|---|---|---|---|
| Test Sample | PTP1B | α-Glucosidase | HRAR | AGE |
| 6-FU | 1.13 ± 0.12 *** | 58.36 ± 1.02 *** | 5.11 ± 0.21 ** | 2.15 ± 0.13 *** |
| Kib | 1.72 | 49.52 | 4.87 | |
| Inhibition type c | Competitive | Mixed | Mixed | |
| Ursolic acid d | 4.28 ± 0.32 ** | |||
| Acarbose e | 123.88 ± 0.87 ** | |||
| Quercetin f | 3.14 ± 0.17 ** | |||
| Aminoguanidine g | 527.43 ± 4.55 * | |||
| Zenarestat h | 0.63 ± 0.01 *** |
a The 50% inhibition concentrations (IC50, µM) are expressed as the mean ± SEM of triplicates. b Inhibition constants (Ki) were determined using Dixon plots. c Inhibition type was determined by interpreting the Dixon plot and Lineweaver-Burk plot. d–h Positive controls. *p< 0.05, ** p < 0.001, and *** p < 0.0001 indicate significance differences from control.
Figure 1Lineweaver-Burk and Dixon plots for protein tyrosine phosphatase 1B (PTP1B), α-glucosidase and human recombinant aldose reductase (HRAR) inhibition by 6-FU. (a) Lineweaver-Burk plot for PTP1B inhibition by 6-FU was analyzed in the presence of different concentrations of sample as follows: 0 µM (■), 1.25 µM (▼), 2.5 µM (▼), 5 µM (●), and 10 µM (●). (b) Dixon plots of PTP1B inhibition by 6-FU: 2 mM (●), 1.0 mM (●), and 0.5 mM (▼) for pNPP. (c) Lineweaver-Burk plot for α-glucosidase inhibition by 6-FU was analyzed in the presence of different concentrations of sample as follows: 0 µM (■), 31.25 µM (▼), 62.5 µM (▼), 125 µM (●), and 250 µM (●). (d) Dixon plots of α-glucosidase inhibition by 6-FU: 2.5 mM (▼), 1.25 mM (●), and 0.625 mM (●) for pNPG. (e) Lineweaver-Burk plot for HRAR inhibition by 6-FU was analyzed in the presence of different concentration of sample as follows: 0 µM (■), 0.08 µM (▼), 0.4 µM (▼), 2.0 µM (●), and 10 µM (●). (f) Dixon plots of HRAR inhibition by 6-FU: 5 mM (●), 10 mM (●), and 20 mM (▼) for DL-glyceraldehyde.
Figure 2Molecular docking model for protein tyrosine phosphatase 1B (PTP1B) inhibition by 6-FU. (a) Overlapping of the docked 6-FU (red) and compound 23 (yellow) within the active site of PTP1B (PDB: 1NNY). 2D interactions of compound 23 (b) and 6-FU (c) inside the active pocket of PTP1B. Molecular docking model for PTP1B inhibition by 6-FU and diagrams of 3D ligand interactions and major binding interactions of inhibitors with the 1NNY active site: compound 23 (d), and 6-FU (e). The interactions are represented in green (conventional hydrogen bonding), pink (π-alkyl interactions), gold accent (π-sulfur), purple (π-sigma), dark pink (π-π T shaped), and light green (π-donor).
Binding energies and binding interactions of 6-FU, cognate ligands, and positive controls in protein tyrosine phosphatase 1B (PTP1B), α-glucosidase, human recombinant aldose reductase (HRAR), and human serum albumin (HSA) using the Autodock vina docking program and visualization by Discovery Studio Visualizer.
| Target Enzymes | PDB ID | Ligands | Binding Energies | Hydrogen Bonds, Interacting Residues, and Bonding Distance | Hydrophobic Interactions |
|---|---|---|---|---|---|
| Protein tyrosine phosphatase 1B (PTP1B) | 1NNY | 6-formyl umbelliferone (6-FU) | −8.1 | Gly218 (2.89 Å), Gly220 (1.97Å), Ile219 (2.10 Å), Ser216 (2.75 Å), Arg221 (2.58 Å), Lys116 (2.29 Å) | Ala217 (π-alkyl, 4.50 Å), Cys215 (π-alkyl, 4.84 Å) |
| Compound | −8.6 | Asp48 (2.82 and 2.64 Å), Arg254 (2.86 Å), Arg221(2.80 and 3.05 Å), Ser216 (3.14 Å), Gly220 (2.72 Å), Gly218 (3.39 Å), Ile219 (3.01 Å), Ala217 (2.69 Å) | Ala27 (π-alkyl, 5.09 Å), Ala217 (π-alkyl, 5.36 Å), Met258 (π-sulfur, 5.59 and 5.91 Å), Tyr46 (π-sigma, 3.57 Å), Ala217 (π-sigma, 3.87 Å), Tyr46 (π-π stacked 5.21 Å), Tyr46 (carbon hydrogen bond, 3.94 Å), Gly220 (π-donor-hydrogen bond, 3.88 Å) | ||
| α-Glucosidase | 3A4A | 6-formyl umbelliferone (6-FU) | −7.9 | Asn235 (1.83 Å), Asn317 (2.17 Å), Gly161 (2.05 Å), Lys156 (3.08 Å) | Ala418 (π-alkyl, 4.69 Å), Ile419 (π-alkyl, 5.24 Å), His423 (π-π T-shaped 5.10 Å), Lys156 (π-cation, 4.01 Å), Lys156 (carbon hydrogen bond, 3.38 Å) |
| Acarbose | −8.2 | Asp352 (2.38 Å), Asp215 (2.90 Å), Arg442 (2.31 Å), Gln279 (3.02 Å), Pro312 (3.08 Å), Ser240 (2.90 Å), Tyr158 (2.73 Å) | Pro312 (carbon hydrogen bond, 2.68 Å), His280 (π-sigma, 3.93 Å), Glu411 (unfavorable accepter-accepter, 2.93 Å) | ||
| Alpha-D-glucose | −6.8 | Asp69 (2.63 Å), Arg442 (2.78 Å), Arg213 (2.89 Å), Asp352 (2.67 and 2.52Å), Asp (2.88 Å), Glu277 (2.75 Å), His112 (2.77 Å), His351 (3.01 and 3.01 Å) | Tyr72 (π-donor hydrogen bond 3.93 Å), Asp69 (carbon hydrogen bond, 3.41 Å) | ||
| Human recombinant aldose reductase (HRAR) | 1IEI | 6-formyl umbelliferone (6-FU) | −7.8 | Cys298 (2.19 Å), Tyr309 (2.10 Å) | Leu300 (π-sigma, 3.64 Å), Leu300 (π-alkyl, 4.48 Å), Cys303 (π-alkyl, 5.02 Å), Trp111 (π-π stacked, 4.57 and 4.21 Å) |
| Zenarestat | −8.0 | Cys298 (2.45 Å), Lys21 (2.29 Å), Tyr48 (2.91 Å), Trp111(2.98 Å), Trp20 (2.78 Å) | Trp20 (π-alkyl, 4.83 Å), Pro218 (π-alkyl, 4.83 Å), Lys21 (π-alkyl, 5.23 Å), Val47 (alkyl, 4.48 Å), Nap350 (π-alkyl, 4.44 Å), Trp20 (π-π stacked, 5.56 Å) | ||
| Quercetin | −8.2 | Arg217 (2.32 and 4.09 Å), Gly213 (2.59 Å), Leu227 (2.64 Å), Ser226 (2.66 Å) | Pro215 (π-alkyl, 5.07 and 3.99 Å), Asp224 (unfavorable donor-donor, 3.68 Å), Pro222 (carbon hydrogen bond, 3.49 Å) | ||
| Human serum albumin (HSA) | 1AO6 | 6-formyl umbelliferone (Site-I) | −6.9 | Arg257 (3.46 Å) | Leu260 (π-alkyl, 5.29 Å), Ala291(π-alkyl, 4.64 and 4.28 Å), Leu238 (π-alkyl, 5.31Å), Ile290 (π-alkyl, 5.26 Å), Leu238 (π-sigma, 4.77 Å), Arg222 (π-cation, 4.32 Å) |
| 6-formyl umbelliferone (Site-II) | −6.6 | Asn405 (2.38 Å) | Ala406 (π-alkyl, 4.84 Å), Leu529 (π-alkyl, 4.95 Å), Lys545 (π-alkyl, 4.08 and 3.98 Å), Val406 (π-alkyl, 5.17 Å), Met548 (π-sulfur, 5.71 Å), Val409 (π-sigma, 3.91 Å), Leu544 (amide-π stacked, 4.33 Å), Asn403 (amide-π stacked, 4.54 and 4.59 Å) |
Figure 3Molecular docking model for α-glucosidase inhibition by 6-formyl umbelliferone (6-FU). (a) Overlapping of the docked acarbose (dark pink), alpha D-glucose (yellow), and 6-FU (blue) within the active site of α-glucosidase (PDB: 3A4A). 2D interactions of alpha D-glucose (b), acarbose (c), and 6-FU (d) inside the active pocket of α-glucosidase. Molecular docking model for α-glucosidase inhibition by 6-FU and diagrams of 3D ligand interactions and major binding interactions between the inhibitors and the active site of 3A4A: alpha D-glucose (e), acarbose (f), and 6-FU (g). The interactions are represented in green (conventional hydrogen bonding), pink (π-alkyl interactions), gold accent (π-cation), purple (π-sigma), dark pink (π-π T shaped), red (donor-donor acceptor), and light green (carbon hydrogen bond).
Figure 4Molecular docking model for human recombinant aldose reductase (HRAR) inhibition by 6-formyl umbelliferone (6-FU). (a) Overlapping of the docked 6-FU (yellow), zenarestat (dark pink), NADP (red), and quercetin (cyan) within the active site of HRAR (PDB: 1IEI). 2D interactions of zenarestat (b), quercetin (c), and 6-FU (d) inside the active pocket of HRAR. Molecular docking model for HRAR inhibition by 6-FU and diagrams of 3D ligand interactions and major binding interactions between the inhibitors and the active site of 1IEI: zenarestat (e), quercetin (f), and 6-FU (g). The interactions are represented in green (conventional hydrogen bonding), pink (π-alkyl interactions), purple (π-sigma), dark pink (π-π T shaped), and red (donor-donor acceptor).
Figure 5Molecular docking model for human serum albumin (HSA) inhibition by 6-formyl um-belliferone (6-FU). (a) Overlapping of the docked 6-FU (yellow) in subdomain IIA (binding site I) of HSA and 6-FU (red) in subdomain IIIA (binding site II) of HSA (PDB: 1AO6). The HSA domains are colored blue for domain I, cyan for domain II, and green for domain III. 2D interactions of 6-FU inside subdomain IIA of HSA (b) and 3D interactions and major binding interactions between the inhibitors and subdomain IIA of HSA (c). 2D interactions of 6-FU inside subdomain IIIA of HSA (d) and 3D interactions and major binding interactions between the inhibitors and subdomain IIIA of HSA (e). The interactions are represented in green (conventional hydrogen bonding), pink (π-alkyl interactions), orange (π-cation), purple (π-sigma), dark pink (amide-π stacked), and gold accent (π-sulfur).
Figure 6(a) Chemical structure of 6-FU. (b) Effect of 6-FU on C2C12 cell viability. Cell viabilities were assessed using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay. (c) Effect of 6-FU on insulin-stimulated glucose uptake in insulin-resistant C2C12 skeletal muscle cells. Glucose uptake was assayed using the fluorescent D-glucose analogue 2-[N-(7-nitrobenz-2-oxa-1, 3-diazol-4-yl) amino]-2-deoxy-D-glucose (2-NBDG), and 100 nM insulin was used to induce insulin resistance. Cells were treated for 24 h with different concentrations of 6-FU and rosiglitazone, and then the insulin-stimulated 2-NBDG uptakes were measured. The results are expressed as the means ± SEMs of three separate experiments. a–f Different letters indicate statistical differences among the means of each rosiglitazone and 6-FU concentration. (d) Effect of 6-FU on protein tyrosine phosphatase 1B (PTP1B) levels in insulin-resistant C2C12 cells. C2C12 muscle cells were treated with the indicated concentrations of 6-FU for 12 h or 100 nM insulin for 60 min in serum-free Dulbecco’s modified Eagle medium (DMEM). Then, 2-NBDG was added at a final concentration of 20 µM in glucose-free DMEM for 30 min. (e) The relative densities of PTP1B versus β-actin and protein band intensities were quantified by densitometry. Results were normalized to β-actin levels and are presented as the means ± SEMs of three separate experiments. a–f Different letters indicate significant differences among the means of each rosiglitazone and 6-FU concentration. c Indicates normal C2C12 cells, a Indicates insulin resistant C2C12 cells. Results were analyzed by ANOVA and Duncan’s test (p < 0.05).
Figure 7The inhibitory effect of 6-formyl umbelliferone (6-FU) and aminoguanidine (AG) on the formation of fluorescent advanced glycation end-products (AGEs) in the human serum albumin (HSA)–glucose–fructose system. Data are expressed as the mean ± SEM from a minimum of duplicate independent experiments. a Represents a significant increase compared with the HSA values. Significant differences within each group are denoted by letters. a–u Means with different letters differed significantly in the ANOVA and Duncan’s test analysis (p < 0.05).