Literature DB >> 36073916

Draft Genome Sequence of Cupriavidus basilensis SRS, a Bacterium Isolated from Stream Sediments.

He Fu1, Alex Kugler2, Patrick Huyck1, Robin L Brigmon2, Elizabeth A Ottesen1.   

Abstract

Cupriavidus basilensis SRS was isolated from stream sediments from the Savannah River Site in South Carolina. Here, we report the draft genome sequence and annotation of Cupriavidus basilensis SRS. The genome contains 8,918,236 bp and 7,916 predicted protein-coding genes, with a total G+C content of 65.2%.

Entities:  

Year:  2022        PMID: 36073916      PMCID: PMC9584297          DOI: 10.1128/mra.00691-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN: 2576-098X


  23 in total

1.  Simultaneous biodegradation of three mononitrophenol isomers by a tailor-made microbial consortium immobilized in sequential batch reactors.

Authors:  H Fu; J-J Zhang; Y Xu; H-J Chao; N-Y Zhou
Journal:  Lett Appl Microbiol       Date:  2017-01-30       Impact factor: 2.858

2.  Shifting the genomic gold standard for the prokaryotic species definition.

Authors:  Michael Richter; Ramon Rosselló-Móra
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-23       Impact factor: 11.205

3.  Metal biosorption capability of Cupriavidus taiwanensis and its effects on heavy metal removal by nodulated Mimosa pudica.

Authors:  Wen-Ming Chen; Chih-Hui Wu; Euan K James; Jo-Shu Chang
Journal:  J Hazard Mater       Date:  2007-06-02       Impact factor: 10.588

4.  Whole-genome sequence of Cupriavidus sp. strain BIS7, a heavy-metal-resistant bacterium.

Authors:  Kar Wai Hong; Dinaiz al Thinagaran; Han Ming Gan; Wai-Fong Yin; Kok-Gan Chan
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

5.  Taxonomy of the genus Cupriavidus: a tale of lost and found.

Authors:  Peter Vandamme; Tom Coenye
Journal:  Int J Syst Evol Microbiol       Date:  2004-11       Impact factor: 2.747

6.  Complete Multipartite Genome Sequence of the Cupriavidus basilensis Type Strain, a 2,6-Dichlorophenol-Degrading Bacterium.

Authors:  Francisco Salvà-Serra; Raúl A Donoso; Kyoung Hee Cho; Ji A Yoo; Kihyun Lee; Seok-Hwan Yoon; Beatriz Piñeiro-Iglesias; Edward R B Moore; Danilo Pérez-Pantoja
Journal:  Microbiol Resour Announc       Date:  2021-05-13

7.  Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site.

Authors:  Jayashree Ray; R Jordan Waters; Jeffrey M Skerker; Jennifer V Kuehl; Morgan N Price; Jiawen Huang; Romy Chakraborty; Adam P Arkin; Adam Deutschbauer
Journal:  Genome Announc       Date:  2015-05-14

8.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

Authors:  Donovan H Parks; Michael Imelfort; Connor T Skennerton; Philip Hugenholtz; Gene W Tyson
Journal:  Genome Res       Date:  2015-05-14       Impact factor: 9.043

9.  High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries.

Authors:  Chirag Jain; Luis M Rodriguez-R; Adam M Phillippy; Konstantinos T Konstantinidis; Srinivas Aluru
Journal:  Nat Commun       Date:  2018-11-30       Impact factor: 14.919

10.  Genome of Cupriavidus sp. HMR-1, a Heavy Metal-Resistant Bacterium.

Authors:  Li-Guan Li; Lin Cai; Tong Zhang
Journal:  Genome Announc       Date:  2013-02-14
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