Literature DB >> 36058963

Age-Specific Features of the Levels of Reference Proteins Actin, Tubulin, and GAPDH in Different Organs of Male Wistar Rats.

D Sh Dzhalilova1, A M Kosyreva2,3, P A Vyshnyakova3,4, I S Tsvetkov2, N A Zolotova2, E A Miroshnichenko2, O V Makarova2.   

Abstract

Western blot analysis is used for evaluation of the level of proteins production in organs and tissues, and housekeeping proteins GAPDH, actin, and tubulin are usually used as the reference proteins. The signal of the target protein is normalized to the corresponding signal of the reference protein. The data on the intensity of actin, tubulin, and GAPDH synthesis are fragmentary: their expression differs in different organs and can vary depending on age, which is often not taken into account in experimental studies. We studied the features of the production of reference proteins in the liver, heart, brain, and lungs of newborn, prepubertal, and adult male Wistar rats. Age-related differences in the expression of β-actin, β-tubulin, and GAPDH in the myocardium and dorsal prefrontal cortex were revealed. GAPDH expression in the dorsal prefrontal cortex in adult rats was significantly higher than in prepubertal rats; GAPDH expression in the myocardium of adult rats was significantly higher than in newborns. The level of actin in the dorsal prefrontal cortex in newborn rats was significantly higher than in prepubertal and adult rats. In the liver and lungs, the expression of actin, tubulin, and GAPDH did not differ in newborn, prepubertal, and adult rats. When choosing the reference protein for Western blotting, animals age and the studied organ should be taken into account.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Western blot; age differences; rats; “housekeeping” proteins

Mesh:

Substances:

Year:  2022        PMID: 36058963     DOI: 10.1007/s10517-022-05565-5

Source DB:  PubMed          Journal:  Bull Exp Biol Med        ISSN: 0007-4888            Impact factor:   0.737


  11 in total

1.  Developmental sex differences in glutamic acid decarboxylase (GAD(65)) and the housekeeping gene, GAPDH.

Authors:  T S Perrot-Sinal; A M Davis; M M McCarthy
Journal:  Brain Res       Date:  2001-12-20       Impact factor: 3.252

2.  Variable expression of some "housekeeping" genes during human keratinocyte differentiation.

Authors:  Brandi K Steele; Craig Meyers; Michelle A Ozbun
Journal:  Anal Biochem       Date:  2002-08-15       Impact factor: 3.365

3.  Effects of creatine supplementation on housekeeping genes in human skeletal muscle using real-time RT-PCR.

Authors:  R M Murphy; K K O Watt; D Cameron-Smith; C J Gibbons; R J Snow
Journal:  Physiol Genomics       Date:  2003-01-15       Impact factor: 3.107

4.  GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues.

Authors:  Robert D Barber; Dan W Harmer; Robert A Coleman; Brian J Clark
Journal:  Physiol Genomics       Date:  2005-03-15       Impact factor: 3.107

5.  Glyceraldehyde-3-phosphate dehydrogenase varies with age in glycolytic muscles of rats.

Authors:  D A Lowe; H Degens; K D Chen; S E Alway
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2000-03       Impact factor: 6.053

6.  Housekeeping proteins: a preliminary study illustrating some limitations as useful references in protein expression studies.

Authors:  Roisean E Ferguson; Helen P Carroll; Adrian Harris; Eamonn R Maher; Peter J Selby; Rosamonde E Banks
Journal:  Proteomics       Date:  2005-02       Impact factor: 3.984

Review 7.  An old method facing a new challenge: re-visiting housekeeping proteins as internal reference control for neuroscience research.

Authors:  Rena Li; Yong Shen
Journal:  Life Sci       Date:  2013-02-27       Impact factor: 5.037

8.  beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels.

Authors:  E M Glare; M Divjak; M J Bailey; E H Walters
Journal:  Thorax       Date:  2002-09       Impact factor: 9.139

9.  Muscle fiber type composition of the rat hindlimb.

Authors:  R B Armstrong; R O Phelps
Journal:  Am J Anat       Date:  1984-11

10.  Β-actin does not show the characteristics of a reference protein in human cortex.

Authors:  Georgia M Parkin; Madhara Udawela; Andrew Gibbons; Brian Dean
Journal:  Electrophoresis       Date:  2018-11-06       Impact factor: 3.535

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