| Literature DB >> 36034444 |
M Hernández1,2, Y Nóvoa-Medina3,4, R Faner5, E Palou5, A Esquerda6, E Castelblanco7,8, A M Wägner4,9, D Mauricio10,11,12.
Abstract
Background: There is a controversy regarding Latent Autoimmune Diabetes in Adults (LADA) classification and whether it should be considered a slowly progressing form of type 1 (T1) diabetes (DM) or a distinct type of DM altogether.Entities:
Keywords: HLA class II; INS; LADA (latent autoimmune diabetes in adults); PTPN22; Type 1 diabetes mellitus; age of onset; genetics
Mesh:
Substances:
Year: 2022 PMID: 36034444 PMCID: PMC9404871 DOI: 10.3389/fendo.2022.916698
Source DB: PubMed Journal: Front Endocrinol (Lausanne) ISSN: 1664-2392 Impact factor: 6.055
Primers and probes used for INS and PTPN22 genotyping.
| Name | Sequence | 5’ Mod. | 3’ Mod. |
|---|---|---|---|
| rs689_F | CAGCAGGGAGGACGTGGC | ||
| rs689_R | CCCCGCACACTAGGTAGAGA | ||
| rs689_anchor | GCCTTCAGCCTGCCTCAGCCCT | 6-FAM-Q | |
| rs689s_sensor | CCTGTCACCCAGATCAC | Cy-5 | Phos |
| rs2476601_F | CCTCAAACTCAAGGCTC | ||
| rs2476601_R | CCTTTGGATTGTTCTAATTAAC | ||
| rs2476601_anchor | AATCATTTATTGTGGTTGAGGAAGCT | Cy-5 | Phos |
| rs2476601_sensor | ACTTCCTGTACGGACACCT | 6-FAM-Q |
Characterization of the participants according to type of diabetes.
| T1DM<30 | T1DM>30 | LADA | T2DM | |
|---|---|---|---|---|
| 178 | 70 | 74 | 256 | |
| 91 (51.1) | 32 (45.7) | 28 (38.3) | 98 (37.8) | |
| 29.5 (8.6)* | 47.9 (12.3)* | 54.2 (12.2) | 55.9 (9.3)* | |
| 13.3 (5.9)* | 5.4 (5) | 5.2 (6.6) | 2.7 (2.3)* | |
| 87.2 (9.9)* | 90.5 (12.7) | 94.3 (12.1) | 101.7 (13.6)* | |
| 22.1 (3.6) | 25.7 (5.9) | 26.5 (4.2) | 30 (5.6) |
Continuous variables are expressed as mean (standard deviation) T1DM<30: type 1 diabetes diagnosed before the age of 30. T1DM>30: type 1 diabetes diagnosed after the age of 30. *p ≤ 0.004 compared with LADA. T1DM, Type 1 Diabetes Mellitus; LADA, Latent Autoimmune Diabetes of the Adult; T2DM, Type 2 Diabetes Mellitus.
HLA allele and haplotype distribution among groups.
| T1DM<30 | T1DM>30 | T1DM (total) | T2DM | LADA | T1DM vs. LADA | T2DM vs. LADA | T1DM>30 vs. LADA | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N | % | N | % | N | % | N | % | N | % | p-value | p-value | p-value | |
| 92 | 51.7% | 33 | 45.2% | 125 | 49.8% | 71 | 27.8% | 24 | 31.6% | 0.005 | 0.527 | 0.087 | |
| 83 | 46.6% | 30 | 41.1% | 113 | 45.0% | 58 | 22.7% | 22 | 28.9% | 0.013 | 0.268 | 0.120 | |
| 65 | 36.5% | 22 | 30.1% | 87 | 34.7% | 44 | 17.3% | 16 | 21.1% | 0.039 | 0.157 | 0.318 | |
| 119 | 66.9% | 28 | 38.4% | 147 | 58.6% | 48 | 18.8% | 37 | 48.7% | 0.128 | <0.001 | 0.204 | |
| 34 | 19.1% | 5 | 6.8% | 39 | 15.5% | 9 | 3.5% | 5 | 6.6% | 0.045 | 0.246 | 0.947 | |
| 43 | 24.2% | 7 | 9.6% | 50 | 19.9% | 13 | 5.1% | 8 | 10.5% | 0.060 | 0.088 | 0.849 | |
| 4 | 2.2% | 4 | 5.5% | 8 | 3.2% | 54 | 21.2% | 4 | 5.3% | 0.399 | 0.001 | 0.953 | |
| 2 | 1.1% | 2 | 2.7% | 4 | 1.6% | 46 | 18.0% | 4 | 5.3% | 0.088 | 0.006 | 0.681 | |
| 11 | 6.2% | 19 | 26.0% | 30 | 12.0% | 149 | 58.4% | 23 | 30.3% | <0.001 | <0.001 | 0.566 | |
**: no DRB1*03 or DRB1*04 or DQB1*02:01 or DQB1*03:02;
T1DM, Type 1 Diabetes Mellitus; LADA, Latent Autoimmune Diabetes of the Adult; T2DM, Type 2 Diabetes Mellitus.
Polymorphisms in PTPN22 and INS gene analysis in samples from controls (umbilical cord) and patients diagnosed with T1DM before (T1DM<30) and after 30 years of age (T1DM>30), LADA and T2DM.
| Gene | SNP | Umbilical Cord | T1DM<30* | T1DM>30 | LADA | T2DM |
|---|---|---|---|---|---|---|
| C/C | 224 (91.4%) | 127 (73.0%) | 16 (76.2%) | 50 (86.2%) | 220 (87%) | |
| C/T | 21 (8.6%) | 46 (26.4%) | 5 (23.8%) | 8 (13.8) | 32 (12.6%) | |
| T/T | 0 (0%) | 1 (0.6%) | 0 (0%) | 0 (0%) | 1 (0.4%) | |
| A/A | 123 (50.2%) | 115 (66.1%) | 12 (57.1%) | 32 (55.2%) | 121(47.8%) | |
| A/T | 100 (40.8%) | 55 (31.6%) | 8 (38.1%) | 20 (34.5%) | 106 (41.9%) | |
| T/T | 22 (9.0%) | 4 (2.3%) | 1 (4.8%) | 6 (10.3%) | 26 (10.6%) |
*distribution among genotypes is significantly different (p<0.05) from LADA.
SNP: single nucleotide polymorphism; PTPN22: Protein Tyrosine Phosphatase Non-Receptor Type 22 gene; INS: Insulin gene; T1DM: Type 1 Diabetes Mellitus; LADA: Latent Autoimmune Diabetes of the Adult; T2DM: Type 2 Diabetes Mellitus.
Studies assessing HLA, PTPN22 and INS in LADA, type 1 and type 2 diabetes.
| Author | Year | Type of article. Population | Subjects (Diagnosis (N)) | HLA | ||
|---|---|---|---|---|---|---|
| Cervin et al. ( | 2008 | Original. Sweden | T1DM (718), LADA (361), T2DM (1676) & healthy controls (1704) | Similar high-risk HLA in LADA vs T1DM. Increased protective HLA in LADA vs T1DM | Risk genotypes (CT/TT) increased in both T1DM and LADA vs controls | Risk genotype (AA) increased in T1DM and LADA vs controls |
| Pettersen et al. ( | 2010 | Original. Norway | T1DM (120), LADA (126), T2DM (1090) & healthy controls (1503) | Risk haplotype decreased and protective haplotype increased in the following order: early T1D–late T1DM–high antiGAD LADA–low antiGAD LADA–T2DM–control | Associated with T1DM but not with LADA | Associated with T1DM but not with LADA |
| Andersen et al. ( | 2010 | Original. Finland | T1DM>35y (257), T2DM & LADA (213) | Risk genotypes more frequent in T1DM vs LADA, and in LADA vs T2DM | Risk genotypes more frequent in T1DM vs LADA, and in LADA vs T2DM | Risk genotypes linked to T1DM. No difference in LADA vs T2DM |
| Weber et al. ( | 2010 | Original. Czech Republic | T1DM>35y (41), LADA (61) & healthy controls (99) | High risk alleles (DRB1*03, 04) more frequent in T1DM vs LADA and vs controls | ———————— | ———————— |
| Kisand et al. ( | 2012 | Original. | T1DM (154), T2DM (260), LADA (65) & healthy controls (229) | LADA associated with T1DM protective haplotypes | Increased risk of T1DM (T/T OR=7.2) vs controls. No effect found on LADA | Protective for T1DM (T/T phenotype, OR=0.06). No effect on LADA |
| Okruszko et al. ( | 2012 | Original. Poland | T1DM (175), LADA (80) & healthy controls (151) | Frequency of high-risk genotypes decreased with age for both <T1DM and LADA. Protective genotypes increased with age | T/T genotype was more frequent in T1DM and LADA vs controls. Increased frequency with age in T1DM | ———————— |
| Dong et al. ( | 2014 | Meta-analysis | 6 studies: | ———————— | T allele increased risk of LADA vs controls (OR=1.52). Homozygous (T/T), OR=1.86; heterozygous (C/T), OR=1.52. | ———————— |
| Cousminer et al. ( | 2018 | GWAS European | LADA (2634) & controls (5947) | LADA showed lower frequencies of T1DM risk HLA alleles | Increased frequency in T1DM and LADA vs T2DM. No difference between T1DM and LADA. | Higher frequency in T1DM and LADA vs T2DM. No difference between T1DM and LADA. |
| Ramu et al. ( | 2019 | Meta-analysis | 16 studies. | ———————— | T allele increased risk of LADA vs controls (OR=1.6). In homozygous (T/T) the risk increased (OR=2.67) | T allele protective for LADA (OR=0.6). |
| Buzzeti et al. ( | 2007 | Original. Italy | T2DM (382) & LADA (191) | Higher frequency of moderate and high risk HLA class II haplotypes in LADA (22.5% and 8.4% respectively) compared with T2DM (11.2% and 1.2% respectively) | ———————— | ———————— |
*Some authors mention the T allele to express the risk, and others mention the complementary nucleotide A. T is used throughout the table and text, for clarity’s sake. T1DM, type 1 diabetes; T2DM, type 2 diabetes.