Dario Campisi1, Thanja Lamberts2,1, Nelson Y Dzade3, Rocco Martinazzo4, Inge Loes Ten Kate5, Alexander G G M Tielens1. 1. Leiden Observatory, Leiden University, Niels Bohrweg 2, Leiden 2333 CA, The Netherlands. 2. Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, Leiden 2300 RA, The Netherlands. 3. Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, U.K. 4. Department of Chemistry, Università degli Studi di Milano, Via Golgi 19, Milan 20133, Italy. 5. Department of Earth Sciences, Faculty of Geosciences, Utrecht University, Princetonlaan 8a, Utrecht 3584 CB, The Netherlands.
Abstract
Understanding how to catalytically break the C-H bond of aromatic molecules, such as polycyclic aromatic hydrocarbons (PAHs), is currently a big challenge and a subject of study in catalysis, astrochemistry, and planetary science. In the latter, the study of the breakdown reaction of PAHs on mineral surfaces is important to understand if PAHs are linked to prebiotic molecules in regions of star and planet formation. In this work, we employed a periodic density functional theory along with Grimme's D4 (DFT-D4) approach for studying the adsorption of a sample of PAHs (naphthalene, anthracene, fluoranthene, pyrene, coronene, and benzocoronene) and fullerene on the [010] forsterite surface and its defective surfaces (Fe-doped and Ni-doped surfaces and a MgO-Schottky vacancy) for their implications in catalysis and astrochemistry. On the basis of structural and binding energy analysis, large PAHs and fullerene present stronger adsorption on the pristine, Fe-doped, and Ni-doped forsterite surfaces than small PAHs. On a MgO-Schottky vacancy, parallel adsorption of the PAH leads to the chemisorption process (C-Si and/or C-O bonds), whereas perpendicular orientation of the PAH leads to the catalytic breaking of the aromatic C-H bond via a barrierless reaction. Spin density and charge analysis show that C-H dissociation is promoted by electron donation from the vacancy to the PAH. As a result of the undercoordinated Si and O atoms, the vacancy acts as a Frustrated Lewis Pair (FLP) catalyst. Therefore, a MgO-Schottky vacancy [010] forsterite surface proved to have potential catalytic activity for the activation of C-H bond in aromatic molecules.
Understanding how to catalytically break the C-H bond of aromatic molecules, such as polycyclic aromatic hydrocarbons (PAHs), is currently a big challenge and a subject of study in catalysis, astrochemistry, and planetary science. In the latter, the study of the breakdown reaction of PAHs on mineral surfaces is important to understand if PAHs are linked to prebiotic molecules in regions of star and planet formation. In this work, we employed a periodic density functional theory along with Grimme's D4 (DFT-D4) approach for studying the adsorption of a sample of PAHs (naphthalene, anthracene, fluoranthene, pyrene, coronene, and benzocoronene) and fullerene on the [010] forsterite surface and its defective surfaces (Fe-doped and Ni-doped surfaces and a MgO-Schottky vacancy) for their implications in catalysis and astrochemistry. On the basis of structural and binding energy analysis, large PAHs and fullerene present stronger adsorption on the pristine, Fe-doped, and Ni-doped forsterite surfaces than small PAHs. On a MgO-Schottky vacancy, parallel adsorption of the PAH leads to the chemisorption process (C-Si and/or C-O bonds), whereas perpendicular orientation of the PAH leads to the catalytic breaking of the aromatic C-H bond via a barrierless reaction. Spin density and charge analysis show that C-H dissociation is promoted by electron donation from the vacancy to the PAH. As a result of the undercoordinated Si and O atoms, the vacancy acts as a Frustrated Lewis Pair (FLP) catalyst. Therefore, a MgO-Schottky vacancy [010] forsterite surface proved to have potential catalytic activity for the activation of C-H bond in aromatic molecules.
The study of the reactivity of organic
molecules as feedstock for
the formation of precursors of complex molecular species is the focus
of organic chemistry, materials science, catalysis, astrochemistry,
and planetary science.[1−4] The orbital interaction of an sp2 carbon with an s orbital
of a hydrogen atom forms a strong C–H bond with a bonding energy
of about 4.6 eV, which we can find in aromatic species such as benzene[5] and polycyclic aromatic hydrocarbons (PAHs).[6] Shedding light on the activation of the aromatic
C–H bond is the first step to understand the reactivity of
aromatic molecules.[7] PAHs lock up about
20% of carbon in the universe, whereas 80% is locked up in other species.
PAHs might be linked to other organic molecules because they can act
as a carbon feedstock; therefore, studying their reactivity is also
important for understanding the chemical evolution of our universe.[4]Finding Earth-abundant materials that are
able to activate and
catalyze the C–H bond breaking of aromatic species is still
a big challenge because of its high bond energy and high stability.
Synthetic transition-metal catalysts such as Wilkinson’s (rhodium-based),[8] palladium,[9,10] and iridium catalysts[11] are able to break the aromatic C–H bond.
However, these catalysts are harmful to human health and, moreover,
very expensive.[12] Recently, metal-free
catalysts such as frustrated Lewis pairs[13] (FLPs), formed by a Lewis acid and bases that cannot bind together
as a result of steric hindrances, have been studied because they can
activate aromatic hydrocarbons.[14]Mineral-bearing materials are organized periodic systems and have
been considered as cheap and safe alternatives to synthetic catalysts.[15] In fact, mineral surfaces have active inorganic
interfaces that can host molecular species and possibly activate them.[16] Hence, minerals catalyze processes that are
thermodynamically favorable but kinetically hindered by high energy
barriers.[17]Forsterite (Mg2SiO4) is one of the most abundant
olivinic minerals available on Earth and in space.[18,19] Experimental studies have reported the potential catalytic role
of forsterite and Fe-doped forsterite for the conversion of methanol
to olefine and PAHs.[20,21] However, theoretical and mechanistic
studies on the catalytic activity of forsterite are currently lacking.
Only a few studies have addressed the interaction of organic species
with a forsterite surface using first-principle methods.[22−24]In this work, we use periodic density functional theory (DFT)
along
with Grimme’s D4 method[25] (DFT-D4)
to study the adsorption and C–H activation of PAHs (naphthalene,
anthracene, fluoranthene, pyrene, coronene, and benzocoronene) on
the pristine [010] forsterite surface ([010]-fo).[19,22,26,27] Along with
the pristine [010]-fo surface, we also study the defective surfaces
of [010] forsterite[28] containing Fe dopant
(Fe-[010]-fo),[29,30] Ni dopant (Ni-[010]-fo),[22] and MgO-Schottky vacancy (VMgO-[010]-fo).[31] Defects are ubiquitous, at different concentrations,
in all crystalline mineral structures.[32] They are often promoted by the radiation of isotopic decay, or by
high temperatures during crystal growth, and can be of different natures,
that is, bulk, planar, line, and point defects.[32] A small amount of Fe and Ni in olivine is generally present,[28,33,34] whereas the presence of a MgO-Schottky
vacancy might have been the result of the reaction of olivine with
a small amount of water.[35]We also
include the adsorption of C60 onto forsterite
as this molecule is abundant in space.[36,37] We analyze
the geometrical parameters and adsorption energies for the adsorption
of PAHs and C60 as well as the energy barriers and the
electronic structure associated with the C–H bond dissociation
of PAHs only on the vacancy forsterite surface. As it is not fully
understood whether astronomically PAHs might be formed in situ on
forsterite or adsorbed on forsterite after they are formed in the
gas phase,[18] we report, along with the
adsorption energies, the binding energies that might be used for astronomical
modeling to predict their abundance and formation. This study aims
to understand the surface chemistry of aromatic molecules in interstellar
space and on solar system bodies as well as the role of minerals as
potential catalysts.
Theoretical Methods
Forsterite and PAH Structures
In this study, we model
the crystalline nonpolar [010]-fo surface (Mg96O192Si48) and its defective surfaces under dry conditions,
shown in Figure .
Figure 1
Optimized
slab models of [010] forsterite at two different orientations:
(a) [010]-fo, (b) Fe-[010]-fo, (c) Ni-[010]-fo, and (d) VMgO-[010]-fo (the location of the vacancy is indicated by the Si and
O labels reported on the corresponding undercoordinated atoms). The
vacuum region is located along the z-axis, and the
atomic labels of the corresponding atoms (Si, Mg, O, Ni, and Fe) are
reported.
Optimized
slab models of [010] forsterite at two different orientations:
(a) [010]-fo, (b) Fe-[010]-fo, (c) Ni-[010]-fo, and (d) VMgO-[010]-fo (the location of the vacancy is indicated by the Si and
O labels reported on the corresponding undercoordinated atoms). The
vacuum region is located along the z-axis, and the
atomic labels of the corresponding atoms (Si, Mg, O, Ni, and Fe) are
reported.All models have a 19 × 17.94 × 35.20
Å (α
= β = γ = 90°) supercell (4 × 3 × 1) with
a slab thickness of 9.25 Å. The [010] slab surfaces were generated
by cutting the optimized bulk of forsterite from a prior study[22] using the METADISE code.[38] The bottom layers (about 4 Å thickness) have been
constrained during the whole optimization procedure, whereas the topmost
layers were allowed to relaxed unconstrainedly. The presence of defects
has proved to increase the reactivity and catalytic activity of several
materials.[39−41] Therefore, we decided to model the defective surfaces
of [010]-fo by replacing an undercoordinated Mg atom on the surface
with only one transition metal (e.g., Fe and Ni for this work) and
optimizing the resulting slab model. Furthermore, VMgO-[010]-fo
is created by removing a MgO unit from the [010]-fo surface, again
followed by a reoptimization of the slab. Hence, the pristine surface
is characterized by 12 Mg atoms facing the vacuum region, whereas
the defective surfaces are characterized by only 11 Mg atoms facing
the vacuum region.The PAHs taken into consideration in this
study are naphthalene,
anthracene, pyrene, fluoranthene, coronene, benzocoronene, and fullerene.
These species (Figure as well as Figures S7–S13 in the
Supporting Information) are characterized by honeycomb structures
of fused hexagonal carbon rings bound with hydrogen atoms on their
edges. Fluoranthene is the only PAH with a five-membered ring. The
fullerene, C60, is characterized by a spherical shape (buckyball)
with hexagonal and pentagonal rings bound together, forming [6,6]
and [5,6] ring junctions (Figure S13),
which are bridge C atoms of two hexagonal rings and hexagonal-pentagonal
rings, respectively. The gas-phase model of PAHs has been optimized
in a cubic unit cell with sides of 15 Å.
Figure 3
The skeleton structure of PAHs and the location of carbon–transition-metal
interactions less than 3 Å (see the Supporting Information), on the PAH structure, when they adsorb on the
Fe and Ni-[010]-fo. The legend shows the symbol related to C–Fe
(circles) and C–Ni (squares) interactions.
Calculation Setup
The slab models were optimized using
periodic density functional theory implemented in the SIESTA code,[42] which makes use of localized atomic orbitals
basis sets (LCAO). The details of the method have been described as
well as benchmarked in a prior work[22] and
are summarized here.The Perdew–Becke–Ernzerhof[43] (PBE) exchange-correlation functional has been
employed along with the DZP basis set using the core pseudopotentials
and setting the radii of the split valence type for the hydrogen atoms
to 0.5. The counterpoise correction[44,45] is taken into
account for all calculations to correct for the basis set superposition
error.The dispersion energy is taken into account a posteriori,
on the
optimized geometry at the PBE/DZP level, employing Grimme’s
DFT-D4 code.[25,46,47] The Brillouin zone is sampled using a 2 × 2 × 1 Monkhorst–Pack[48]k-point grid for all surfaces
with a unit cell of 18.996 × 17.938 Å and 1 × 1 ×
1 Monkhorst–Pack k-point grid for the gas-phase
models (reagents). The mesh cutoff is set to 200 Ry (see the Supporting Information of our previous work[22]). All calculations are run with the spin-unrestricted
formalism, and convergence is reached when the forces are lower than
0.01 eV Å –1. All structures are optimized
using the limited-memory Broyden–Fletcher–Goldfarb–Shanno
(L-BFGS) algorithm.[49] An electric field
along the z-axis is set to override the resulting
dipole moment along the z-axis of the slabs during
the optimization procedure. In a prior study,[22] PBE-D4/DZP was proven to be a robust theory level to study the interaction
of aromatic molecules on mineral surfaces.We analyzed the electronic
structure of the vacancy surface with
the spin-density isosurfaces and the population analysis charge based
on the Voronoi scheme.[50] These techniques
allow us to define the spin-up and spin-down population (spin density)
of each atom as well as the electronic donation and acceptance between
the atoms (partial atomic charges). The spin density and charge analysis
have been calculated at the PBE+U level of theory with a single-point
calculation using TZP on the optimized DZP geometry with supplementary
4 × 4 × 1 Monkhorst–Pack’s k-points. The Hubbard U value, using the LDA+U method,[51] is set to 15.3 eV to describe the strong on-site
Coulomb interaction of the localized electrons of the 2p orbitals
of the oxygen atoms to reproduce the experimental band gap (8.4 eV).[52] A threshold tolerance of 10–2 and a tolerance population of 4 × 10–4 are
selected for the LDA+U method. The radii for the split-valence type
of TZP for all atoms, excluding hydrogen, are set up to be 0.30. The
reaction barriers (e.g., the characterization of a saddle point) and
the minimum energy path are calculated using the climbing-image nudged
elastic band method[53] (CI-NEB) implemented
in the atomistic simulation environment[54,55] python module
employing SIESTA as a calculator. The minimum energy path is optimized
through linear interpolation of the reagent and the product by six
images. Each image can be thought of as a representation along the
reaction path with all images interconnected by springs. The optimization
focuses on finding the lowest energy possible for each image, and
the maximum one only for one image, while maintaining the constraint
that they are equally spaced with respect to neighboring images. Note
that, after optimization of the CI-NEB path, the energies of the images
represent the minimum energy path from the initial to the final geometry.
The path is optimized using the Fast Inertial Relaxation Engine (FIRE)[56] algorithm, which provides robust results compared
to those from quasi-Newton methods.[57] The
spring constant is set to 0.1 eV/Å, and the six images between
the reagent and the product are considered optimized when the forces
are lower than 0.025 eV/Å.In this work, the binding energy
(Ebind) is defined asEmol is the energy
of the optimized molecule in the gas phase, Eslab is the energy of the optimized forsterite slab, and Emol–slab is the energy of the optimized
adsorbed molecule on the forsterite slab. Positive and negative binding
energy values show exoergic and endoergic adsorption processes, respectively.The adsorption energy (Eads) is defined
asEproduct is the
energy of the optimized product. For this definition, Eads= −Ebind. Therefore,
negative and positive values of Eads show
exoergic and endoergic processes, respectively.Harmonic frequencies
of PAHs adsorbed onto a vacancy surface are
computed to compare different adsorption configurations that differ
from the position of an H atom. The zero-point energy correction (EΔZP) is calculated asEZPads is the zero-point energy correction of PAH adsorbed onto a vacancy
forsterite surface where only the PAH was allowed to vibrate and EZPmol is the zero-point energy of the PAH in the gas phase. The resulting
corrected zero-point adsorption energy is the sum of Eads and EΔZP.We define contact points (C.P.) as the sum of orbital interactions
between the p orbital of a C atom with the 3p orbital of an Mg atom
and 3d orbital of Fe and Ni atoms. The surface area of each PAHs is
calculated as the sum of the area of the single hexagons and/or pentagons
using the carbon backbone, that is, excluding the bound H atoms.
Results and Discussion
Structure of the [010] Forsterite Surfaces
The [010]-fo
surface has an orthorhombic structure with the Pbnm space group, and differs from the bulk because of the presence
of undercoordinated Mg atoms bound with three neighboring O atoms
on the external layer that faces the vacuum region.The surface
structure of [010]-fo is characterized by undercoordinated Mg atoms
(M1) shown in Figure and fully coordinated Mg atoms (M2) located in the underlying layer.
The Si (Si1) atoms on the surface are fully coordinated (tetrahedral
structures). The bond distances, only for the atoms located on the
surface, are reported in the table included in Figure and show Mg–O and Si–O distances
ranging between 1.63 and 1.90 Å. Mg, O, and Si atoms, on the
surface, form zigzag edges following an alternating unit scheme: −O–Si–O–Mg–O–.
The Mg–O bond lengths of the undercoordinated Mg atoms on the
surface (M1) are shorter than those of the octahedral Mg–O
(M2–O2) with a bond distance that ranges between 2 and 2.16
Å. All calculated bond lengths are in agreement with the DFT
study carried out by Navarro-Ruiz et al.[58] using LCAO methods and by Brodholt using plane wave methods.[59]
Figure 2
Side-view figure that shows the labels of the atomic positions
of the [010]-fo forsterite. M shows the location of an Mg, Fe, and
Ni atoms or MgO vacancy. The table reports distances (d), in Angstrom (Å), and angles, in degrees (°), of the
atoms found in the top figure.
Side-view figure that shows the labels of the atomic positions
of the [010]-fo forsterite. M shows the location of an Mg, Fe, and
Ni atoms or MgO vacancy. The table reports distances (d), in Angstrom (Å), and angles, in degrees (°), of the
atoms found in the top figure.We also studied the presence of point defects on
the [010]-fo surface,
shown in Figure b–d.
The Fe-[010]-fo surface is characterized by an undercoordinated Fe2+ atom bound to three oxygen atoms. When the Fe is located
in the M1 site, it is more stable by 0.30 eV with respect to the M2
site and 0.22 eV with respect to the M3 site. Hence, M1 is the preferred
site (Figure ). The
table reported in Figure shows the bond distances and angles of the Fe-[010]-fo, which
are in close agreement with the geometrical parameters of the pristine
surface.Along with Fe-[010]-fo, we considered the presence
of undercoordinated
Ni as a point defect on the surface, Ni-[010]-fo (Figure c). The location of the Ni
point defect in the M1 site is slightly more stable by about 0.04
and 0.01 eV compared to those of M2 and M3, respectively. However,
this difference is not significant considering the accuracy of the
functional used.[22] Once the transition
metal coordinates with an aromatic molecule such as naphthalene, the
Ni point defect in the M1 site is stabilized by 0.30 and 1.61 eV with
respect to M2 and M3. The table in Figure shows bond distances and angles for Ni-[010]-fo,
which are in close agreement with those for Fe-[010]-fo and [010]-fo.
Overall, the presence of transition metals does not significantly
change the forsterite structure as compared to the pristine [010]-fo
structure. The stability of the transition metals on the surface,
as reported by the study of Navarro-Ruiz et al.,[29] is due to the need to stabilize the high-spin state (quintet
for Fe and triplet for Ni), reducing the Fe or Ni–O electronic
repulsion in the bulk caused by the size of these atoms.Another
type of defect occurring in crystalline structures is the
MgO-Schottky defect, which can be formed when a cation–anion
pair is removed, resulting in a vacancy.[60] The energy required to form the Schottky-MgO vacancy defect is about
7 eV for the bulk[35] and 11.85 eV on the
surface, as computed by us. For comparison, SiO2 vacancies
are less favorable because the formation energy is about 20 eV for
the bulk[35] and 14.23 eV for SiO removed
from the surface, as computed by us. As the formation energies of
these vacancies are large, we expect that the abundance must be low,
which justifies the choice of modeling only one MgO vacancy on the
surface (further discussion is reported in “Astrochemical and Cosmochemical Implications”). The
presence of the Schottky MgO vacancy (VMgO-[010]-fo), shown
in Figure d, causes
an interruption of the zigzag units, resulting in the formation of
a SiO32– unit and O atoms that bridge
an Mg and Si atom. The absence of an MgO unit does not allow the
formation of a bond between the two distant Si and O atoms on the
surface. The distance between the unbound Si and O atoms, the two
labeled atoms in Figure d, in the vacancy is about 5.12 Å, causing the formation of
a cavity. The table in Figure shows that the Si–O distances are slightly shorter
than those of other surfaces. Instead, the O atom that lacks a neighboring
Mg atom because of the vacancy (Figure d) binds with a second neighbor, Si (Si1), which has
a distance of 1.61 and 1.97 Å with the Mg located in the M2 site.
Therefore, the cavity formation (see the structure in Figure a) causes a bond length reorganization
to compensate for the absence of an Mg atom. The MgO vacancy is more
stable when located on the surface in the M1 site by about 2.90 eV
with respect to the M2. Hence, M1 is the most favorable site for all
three defects considered in this study.
Figure 10
Spin-density isosurface (isovalue 0.007 e/A3) of VMgO-[010]-fo (a) and the dissociation of the C−H bond
of naphthalene on the VMgO-[010]-fo (b). Yellow density
indicates the spin-up population and red density the spin-down one.
Interaction of PAHs and C60 with [010] Forsterite
Structural Analysis
Previous theoretical studies have
shown that forsterite strongly binds with aromatic molecules on its
surfaces.[22−24]Therefore, we have selected a sample of PAHs
that span a range in the surface area (Table ) and that contain catacondensed PAHs (e.g.,
acenes, naphthalene, and anthracene), pericondensed PAHs (pyrene and
coronene), and irregular PAHs (benzocoronene). In addition, we also
selected the nonalternant aromatic species fluoranthene and fullerene.
The skeleton structure of the mentioned PAHs is reported in Figure .
Table 1
Surface Area of PAHs and the [010]
Forsterite Surfaces ([010]-fo, Fe-[010]-fo, Ni-[010]-fo, and VMgO-[010]-fo) Optimized in This Studya
surface area (Å2)
naphthalene
10.18
anthracene
15.28
fluoranthene
18.34
pyrene
20.37
coronene
35.64
benzocoronene
40.73
forsterite surfaces (4 × 3 ×
1)
340.74
The average sizes of the hexagons
and pentagons are 1.40 Å, which is the distance of a single C–C
bond.
The skeleton structure of PAHs and the location of carbon–transition-metal
interactions less than 3 Å (see the Supporting Information), on the PAH structure, when they adsorb on the
Fe and Ni-[010]-fo. The legend shows the symbol related to C–Fe
(circles) and C–Ni (squares) interactions.The average sizes of the hexagons
and pentagons are 1.40 Å, which is the distance of a single C–C
bond.We optimized all structures for a parallel adsorption
of the molecular
plane with respect to the surface. The adsorption of PAHs on the [010]
forsterite surfaces causes a slight deviation of the PAH structure
from their planarity (Figure ).
Figure 4
Side views using two different perspectives (second perspective
in thumbnail) of the optimized geometries of benzocoronene adsorbed
on (a) [010]-fo, (b) VMgO-[010]-fo, (c) Fe-[010]-fo, and
(d) Ni-[010]-fo. Atomic labels are reported on the corresponding atoms.
Side views using two different perspectives (second perspective
in thumbnail) of the optimized geometries of benzocoronene adsorbed
on (a) [010]-fo, (b) VMgO-[010]-fo, (c) Fe-[010]-fo, and
(d) Ni-[010]-fo. Atomic labels are reported on the corresponding atoms.This is in-line with the average dihedral angles
of the C atoms
of the PAH skeleton, reported in Table . The average dihedral angles do not show characteristic
planar structures of 180°. With the exception of pyrene, PAH
adsorption on [010]-fo and Fe-[010] causes a larger deviation from
planarity than that on Ni-[010]-fo in which the adsorbed molecules
have dihedral angles close to 180°. The average angles indicate
a perfect 120°, characteristic of sp2 carbons for
all PAHs with the exception of fluoranthene. The latter show larger
angle deviation from 120° with respect to the other PAHs because
of the presence of a five-membered ring that causes major bending
of its structure. The major flexibility due to the presence of a five-membered
ring has been identified also in other materials with PAH-like structures.[39] The and dihedral Θ angles reported in Table indicate that PAHs
adsorbed on the surface have the 120° angles expected for planar
PAHs, whereas the fullerene (C60) deviates from this by
about 6°, as expected for a buckyball-like structure (Figure a,b,c).[61] Thus, we conclude that the adsorption process
does not induce significant changes in the conformational structure
of the PAHs relative to the gas phase, apart from a moderate loss
in planarity.
Table 2
Geometrical Parameters of PAHs Adsorbed
on Forsterite Surfacesa
(C–Mg)
(C–M)
[nC–nMg]
[nC–nM]
C.P.
naphthalene:
[010]-fo[22]
2.61
120.21
176.18
5–2
5
Fe-[010]-fo[22]
2.51
2.43
120.02
172.04
2–1
3–1
5
Ni-[010]-fo[22]
2.64
2.42
120.04
178.14
2–1
3–1
5
anthracene:
[010]-fo
2.65
120.82
173.06
6–2
6
Fe-[010]-fo
2.70
2.40
120.47
176.65
3–2
3–1
6
Ni-[010]-fo
2.73
2.41
120.38
177.05
3–2
3–1
6
fluoranthene:
[010]-fo
2.68
125.34
174.68
7–3
7
Fe-[010]-fo
2.62
2.56
125.73
176.99
3–2
4–1
7
Ni-[010]-fo
2.52
2.62
126.02
177.83
2–1
4–1
6
pyrene:
[010]-fo
2.72
120.79
179.15
5–2
5
Fe-[010]-fo
2.64
2.61
121.19
175.30
3–1
4–1
7
Ni-[010]-fo
2.66
2.50
120.86
177.64
3–1
4–1
7
coronene:
[010]-fo
2.73
120.92
175.63
11–4
11
Fe-[010]-fo
2.63
2.51
120.97
174.78
7–3
3–1
10
Ni-[010]-fo
2.68
2.46
120.80
177.90
5–3
3–1
8
benzocoronene:
[010]-fo[22]
2.71
120.61
176.29
11–4
11
Fe-[010]-fo[22]
2.66
2.47
120.46
178.90
8–4
3–1
11
Ni-[010]-fo[22]
2.67
2.48
120.43
179.18
8–4
3–1
11
fullerene:
[010]-fo
2.74
113.49
139.00
4–2
4
Fe-[010]-fo
2.10
106.82
133.63
2–1
2
Ni-[010]-fo
2.81
2.09
111.65
143.19
1–1
2–1
3
Reported are the average distances in Angstrom (Å), average angles and dihedral angles in degrees (deg), number (n) of atoms (C, Mg, or M) interacting with each other (e.g., [ nC–nMg
]), and the number of contact points (C.P.), which is the sum of C
atoms interacting with either an Mg or transition metal. The average
values are calculated from the geometrical parameters reported in
the Supporting Information. M is the transition
metal (e.g., Fe or Ni) of the corresponding surface (e.g., Fe for
Fe-[010]-fo). Missing values shows no interaction between the atoms.
Figure 5
Side views using two different perspectives (second perspective
in thumbnail) of the optimized geometries of fullerene adsorbed on
(a) [010]-fo, (b) Fe-[010]-fo, (c) Ni-[010]-fo, and (d) VMgO-[010]-fo. Atomic labels are reported on the corresponding atoms.
Side views using two different perspectives (second perspective
in thumbnail) of the optimized geometries of fullerene adsorbed on
(a) [010]-fo, (b) Fe-[010]-fo, (c) Ni-[010]-fo, and (d) VMgO-[010]-fo. Atomic labels are reported on the corresponding atoms.Reported are the average distances in Angstrom (Å), average angles and dihedral angles in degrees (deg), number (n) of atoms (C, Mg, or M) interacting with each other (e.g., [ nC–nMg
]), and the number of contact points (C.P.), which is the sum of C
atoms interacting with either an Mg or transition metal. The average
values are calculated from the geometrical parameters reported in
the Supporting Information. M is the transition
metal (e.g., Fe or Ni) of the corresponding surface (e.g., Fe for
Fe-[010]-fo). Missing values shows no interaction between the atoms.The larger the surface area of the PAHs (Table ), the larger the
number of interactions
of the C atoms either with an Mg or with transition-metal dopant atoms
(contact points), as shown in Table . Although pyrene has a larger surface area than fluoranthene,
the number of contact points in pyrene is roughly the same as that
in fluoranthene. This could be attributed to the more compact structure
of the pyrene skeleton as compared to that of fluoranthene. With the
exception of pyrene and fullerene, the number of Mg atoms interacting
with the C atoms at a distance less than 3 Å increases with increasing
surface area of the PAH. Therefore, the larger the surface area, the
higher the number of contact points. Distances larger than 3 Å
do not present orbital interactions (see Population Analysis section
in the Supporting Information).
Interaction of PAHs and C60 with Doped Forsterite
Figure shows the
preferred carbon sites of PAHs and fullerene that interact with Fe
or Ni on the surface. Naphthalene, anthracene, coronene, and benzocoronene
have three transition-metal interactions located in the edge carbons
of the PAHs. Fluoranthene and pyrene, instead, have four C–Fe
and C–Ni interactions. Furthermore, for fluoranthene and pyrene,
we noticed a different behavior from the Ni–C interactions
because the optimization of the geometry led to a structure in which
the inner carbon of these PAHs can interact with Ni atoms at distances
smaller than 3 Å (see Geometrical Parameters section in the Supporting Information for details). Instead,
fullerene has two Fe–C and Ni–C interactions located
in the [6,6] ring junction.PAHs do not adsorb with the center
of the π-ring on the transition-metal-doped surfaces (Fe and
Ni-[010]-fo), as seen for benzene–cation complexes (gas-phase
configuration) with the same spin configuration of the surfaces (quintet
for Fe2+ and triplet for Ni2+). The gas-phase
configuration shows carbon–transition-metal (C–M) bond
distances of about 2.28 Å for Fe2+ and 2.17 Å
for Ni2+ (values calculated from the optimized geometries
reported in a prior study[22] and in agreement
with published theoretical studies of Fe–PAH complexes in the
gas phase[62]). The PAHs on forsterite surfaces
have, as shown in Table , slightly larger C–M bond distances with respect to the gas-phase
configuration. On a regular forsterite surface, the PAH will orient
itself on the surface to interact closely with as many Mg atoms as
possible. For doped surfaces, binding of PAHs is a competition of
favorable orientations to interact with as many Mg atoms as possible
and to optimize the interaction with the transition metal. Table summarizes this competition,
illustrating that, on doped surfaces, the number of C–Mg interactions
decreases relative to the pristine surface but this is compensated
for by the interactions with the transition metal. In general, but
not always, the number of contact points remains the same. We note
that the difference between the Fe–C and Ni–C bond distances
of the PAHs on forsterite surfaces with respect to the gas-phase configuration,
considering the optimized distance, is about 0.12–0.33 Å
for Fe and 0.24–0.45 Å for Ni. Hence, PAHs can optimize
the Fe–C distance on an Fe-doped surface better than that on
a Ni-doped surface.Fullerene shows smaller (Table ) C–Fe and C–Ni
distances than PAHs,
resulting in a stronger interaction.
Interaction of PAHs and C60 with a Vacancy
The geometrical structures of all species adsorbed on VMgO-[010]-fo are reported separately in a table in Figure . The vacancy has peculiar
structures with respect to the pristine and transition-metal-doped
ones. Specifically, the adsorption of naphthalene, anthracene, fluoranthene,
benzocoronene, and fullerene have characteristic angles for the rehybridization of the C
atoms of PAHs from sp2 to sp3 (about 109°).
The C–Si bond has a short distance, about 1.9 Å, and the angles, about 118–120°, are
close to the geometrical parameters of silane complexes (about 120°).[63] Therefore, the adsorption of these species on
the vacancy surface causes the breaking of one aromatic ring (i.e.,
a chemisorption process). The angles, in the table in Figure , show a perfect 109°
for anthracene, whereas the other PAHs slightly diverge from this
value. Hence, the surface area of anthracene allows a perfect interaction
with the vacancy. Pyrene and coronene do not show covalent bond formation.
In fact, species only with a terminal aromatic ring with four hydrogen
atoms (naphthalene, anthracene, fluoranthene, and benzocoronene) and
the six-membered ring of fullerene form covalent bonds with the undercoordinated
Si and O atoms (see C.N. in the table in Figure ). This occurs as a result of their large
structural flexibility with respect to more compact structures such
as pyrene and coronene. The coordination number of O and Si increases
once PAHs adsorb on the vacancy forsterite surface, in-line with the
formation of C–O and C–Si bonds. For the case of pyrene,
the molecule binds only with the Si atom, leaving the O atom with
a lower coordination number (2) with respect to the adsorption of
the other PAHs and C60. However, the Si–C distance,
for the case of pyrene, is larger by about 0.25 Å as compared
to that for the other PAHs chemisorbed on the vacancy. The adsorption
structure of pyrene on the vacancy is shown in Figure b. All species have O–C and Si–C
bond distances in good agreement with the average experimental values
(1.40 and 1.87 Å, respectively).[64]
Figure 6
For
the PAHs adsorbed on the VMgO-[010]-fo surface,
we report a schematic representation of the atomic labels of the hexagonal
rings chemisorbed with the undercoordinated Si and O for (a) naphthalene,
anthracene, fluoranthene, benzocoronene, and fullerene, (b) pyrene,
and (c) coronene. A table reporting the average distance and distance (d) in Angstrom
(Å), angles and average dihedral angles , in degrees (deg), coordination number
(C.N.) for the specified atom, and the number (n)
of atoms (C and Mg) interacting with each other ([nC–nMg ]) for the vacancy surface, PAHs, and
C60. Missing values indicate no interaction between the
atoms. The average values are calculated from the geometrical parameters
reported in the Supporting Information.
For
the PAHs adsorbed on the VMgO-[010]-fo surface,
we report a schematic representation of the atomic labels of the hexagonal
rings chemisorbed with the undercoordinated Si and O for (a) naphthalene,
anthracene, fluoranthene, benzocoronene, and fullerene, (b) pyrene,
and (c) coronene. A table reporting the average distance and distance (d) in Angstrom
(Å), angles and average dihedral angles , in degrees (deg), coordination number
(C.N.) for the specified atom, and the number (n)
of atoms (C and Mg) interacting with each other ([nC–nMg ]) for the vacancy surface, PAHs, and
C60. Missing values indicate no interaction between the
atoms. The average values are calculated from the geometrical parameters
reported in the Supporting Information.The distance of the undercoordinated Si and O atoms
on the vacancy
structure is reduced once their coordination is completed by the chemisorption
of the PAHs (see the O1–Si1 distance in the table reported
in Figure ). However,
for the case of coronene, the distance O1–Si1 increases with
respect to the noncoordinated surface. Angles and dihedral values
of coronene adsorbed on the vacancy do not show the formation of C
sp3, but a quasi-planar structure, in agreement with the
values shown in the adsorption on the pristine and transition-metal-doped
surfaces. The coordination number of O and Si of the vacancy, when
coronene is adsorbed on it, is completed. Nevertheless, for the case
of coronene adsorbed on the vacancy, there is no covalent bond formation;
the vacancy enlarged its structure to accommodate the large surface
area of coronene, which in turn causes the formation of a Si reconstruction,
as shown in Figure .
Figure 7
Vacancy reconstruction caused by the adsorption of coronene on
VMgO-[010]-fo. In the thumbnail is reported the close-up
perspective of the reconstruction. The atomic labels on the corresponding
atoms indicate the reconstructed atoms.
Vacancy reconstruction caused by the adsorption of coronene on
VMgO-[010]-fo. In the thumbnail is reported the close-up
perspective of the reconstruction. The atomic labels on the corresponding
atoms indicate the reconstructed atoms.The vacancy reconstruction, caused by the adsorption
of coronene
on the vacancy, is characterized by the formation of the Si–O
bond located in the underlying surface, moving the Si atom between
the surface layer and the layer below the surface, completing the
coordination of the Si atom. Also, the O atom on the vacancy completes
the coordination with a Si located in the underlying surface.Because of the interaction of the PAHs with the vacancy, the number
of Mg atoms interacting with C atoms is much lower with respect to
those of the pristine and metal-doped surfaces, comparing the values
between the Table and the table reported in Figure , respectively.
Binding Energy Analysis
Figure summarizes the binding energies for the
PAHs adsorbed on the four different surfaces considered in this study.
Disregarding for the moment the interaction with the Schottky defect,
there is a general trend of increasing binding energy with the PAH
size/surface area, but those of pyrene and the fullerene form an exception
to this, not surprising, given their geometries.
Figure 8
Binding energies of the
adsorption of PAHs on [010] forsterite
surfaces modeled in this study. The surfaces follow the order shown
in the legend for all PAHs. Numerical values are reported in the Supporting Information. The asterisks (*) on
the bars show data reported from a prior work.[22]
Binding energies of the
adsorption of PAHs on [010] forsterite
surfaces modeled in this study. The surfaces follow the order shown
in the legend for all PAHs. Numerical values are reported in the Supporting Information. The asterisks (*) on
the bars show data reported from a prior work.[22]The general increase of the binding energy is attributed
to the
increasing number of contact points (see Table ), which is related to the size of the surface
area (see Table ).
All PAHs are slightly more stabilized (larger binding energy) on Fe-[010]-fo
than on Ni-[010]-fo, which is opposite these species (Fe2+ and Ni2+) on benzene in the gas phase (gas-phase configuration).[22] As discussed in the “Interaction of PAHs
and C60 with Doped Forsterite” section, this reflects subtle geometrical differences in the
balance between Mg–PAH and Ni–PAH interactions. PAH
adsorption on Fe-doped forsterite shows consistently higher binding
energies than that on a pure surface, reflecting that PAHs can optimize
their interaction on this surface better than on a Ni-doped surface.
The binding energy trend between Fe and the pristine surface is, instead,
in agreement with the binding energy trend observed for the binding
of Fe2+ and Mg2+ with benzene in the gas phase.[65]As shown in Figure , all molecules bind strongly on the vacancy
surface with binding
energies larger than 2 eV. We note that anthracene has larger binding
energies than naphthalene, in-line with the reactivity studies conducted
by Bonfanti et al.[66] and Rasmussen.[67] Anthracene adsorbs on the vacancy surface with
the formation of perfect C–Si and C–O bonds and and angles of 109° and 120°, respectively. Table shows the binding
energy of PAHs and fullerene as a function of the and angles (see labels in Figure ). Excluding the special case
of fullerene, the binding energy of PAHs decreases as a function of
the angle deviations from 109° and 120°, for and , respectively. Therefore, anthracene is
the PAH that benefits the most from the adsorption process on the
vacancy surface. Here, we focus only on the localized effect on the
vacancy site as the latter is responsible for chemisorption processes
of PAHs, and we will study the effect of the binding of PAHs on the
pristine part of the vacancy surface in a follow-up study.
Table 3
Binding Energies (Ebind), at PBE-D4/DZP and PBE/DZP Levels, Dispersion Energy
(D4), and Angles (^) Only for the Chemisorbed Molecules, of the Interaction
of PAHs with the VMgO-[010]-fo Surface
Fullerene is an exception because
it benefits from the formation
of covalent bonds with the O and Si atoms on the vacancy and, therefore,
from the rehybridization of the C atoms (from tensioned sp2 to sp3 carbons)[61] that break
the symmetry of the icosahedral structure. Despite the fact that benzocoronene
has larger geometrical deviations than other PAHs (see angles in Table ), its binding energy
is closer to the anthracene one because of the higher dispersion energy
(see Table ).The binding energy of pyrene and coronene deviates with respect
to the other PAHs because of their physisorption state (see the discussion
in the “Structural Analysis”
section and the table in Figure ).The difference in binding energies between
the vacancy surface
and the pristine surfaces is much larger for naphthalene, anthracene,
and fullerene than for the other PAHs. The smaller number of contact
points for naphthalene and anthracene as compared to other PAHs makes
the contribution from the covalent bond formation on the vacancy surface
relatively more important. The propensity of fullerenes for addition
reactions through the carbons of the six-membered ring facilitates
covalent bond formation on the vacancy surface and results in a relatively
high binding energy.
Adsorption Mechanism
In the previous section, we saw
that PAHs strongly bind onto the vacancy surface with the formation
of C–O and C–Si bonds. To evaluate the possible presence
of activation barriers associated with the formation of covalent bonds
(see the “Structural Analysis”
section), we calculated the minimum energy path by employing the CI-NEB
approach to locate possible saddle points (transition states); see
section “C–H Activation” in the Supporting Information. Because of technical and computational
difficulties in optimizing these large molecular interactions with
CI-NEB, we considered only the adsorption of naphthalene and benzocoronene
on the vacancy surface to address potential differences between small
and large PAHs in the chemisorption process. For the PAH approaching
the surface in parallel (Figure a), the adsorption is studied for both naphthalene
and benzocoronene. For a perpendicular orientation (Figure b), we studied only naphthalene
because of technical difficulties.
Figure 9
A schematic representation of the (a)
parallel and (b) perpendicular
adsorption of naphthalene on VMgO-[010]-fo. Atomic labels
depict the bond formation due to the adsorption.
A schematic representation of the (a)
parallel and (b) perpendicular
adsorption of naphthalene on VMgO-[010]-fo. Atomic labels
depict the bond formation due to the adsorption.
Parallel Adsorption
When the molecule is oriented parallel
to the surface (Figure a), the adsorption process is barrierless and has large exoergic
adsorption energy of about −2.2 eV for naphthalene. We also
reported the minimum energy path for benzocoronene (red curve in Figure S3 in Supporting Information) to check how the path changes for large surface area molecules.
Benzocoronene also has a large adsorption energy of about −2.59
eV with a barrierless and exoergic adsorption.
Perpendicular Adsorption
When the molecule is oriented
perpendicular to the surface (Figure b), the adsorption on the VMgO-[010]-fo
leads, during the optimization process, to the dissociation of the
C–H bond of the PAH. In contrast, this process on the pristine
and transition-metal surfaces does not lead to dissociation but only
adsorption (see Figure ). On the vacancy, the optimized minimum energy path (Figure S4), with the CI-NEB method, shows a barrierless
and exoergic reaction of −3.5 eV. Therefore, the dissociation
(perpendicular adsorption) is more favorable than the adsorption (parallel
adsorption) by about −1.3 eV.The electron donation of
the C–Si interaction causes, at the same time, the transposition
of the hydrogen to the neighboring oxygen atom on the vacancy, forming
an O–H bond with a distance of about 0.99 Å, typical for
hydroxyl groups.[64] The last step implies
the adsorption of the remaining carbon skeleton on the surface (Figure b).The spin-density
isosurfaces show a large population of spin down
localized on the Si atoms and spin up localized on the O atoms of
the VMgO-[010]-fo surface (Figure ). The Voronoi
charge analysis shows a partial positive charge on the Si atom (0.897)
and a partial negative charge on the O atom (−0.625). After
the dissociation, the partial electronic charge is reduced to 0.625
for the Si atoms, gaining electrons, and −0.356 for the O atom,
donating electrons. The Voronoi charge analysis shows a donation of
the electrons from the 2p orbital of the C atom of naphthalene to
the 3p orbital of the undercoordinated Si atom on the vacancy, whereas
the O atom donates electron density to the proton (H) dissociated
from the PAH. This behavior is similar to the catalytic effect of
frustrated Lewis pairs (FLPs), which are a Lewis acid and base that
are not able to bind because of geometrical hindrance. Therefore,
the geometrical hindrance causes the increase of the strength of the
Lewis acid and base. The simultaneous electron transfer is responsible
for the cleavage of the C–H bond through a barrierless reaction
promoted by an O and undercoordinated Si atoms, similar to the electron-transfer
mechanism of the FLPs.[68] The formation
of a polar cavity, caused by the electric field generated by the presence
of FLPs, polarizes the C–H bond (see “C–H Activation”
section in the Supporting Information,)
allowing the cleavage of the bond. This activation mechanism was first
suggested by Grimme et al.[69] for the cleavage
of molecular hydrogen, which goes through a barrierless process once
the molecule is inside the cavity and is subjected to the electric
field caused by the presence of the FLPs. The presence of a barrier
is caused only by the entrance of the molecule into the cavity because
of steric hindrance.[69] As the cavity space
between Si and O atoms is almost 5 Å, a terminal C–H bond
of a PAH has enough space to enter the cavity. Hence, the C–H
cleavage is a barrierless process for this case study. In addition,
the O has higher electronic affinity (1.46 eV)[70] than C (1.26 eV)[71] with respect
to the H (0.75 eV),[72] and Si has higher
electronic affinity (1.39 eV)[70] than H.
Hence, the loss of stability caused by the cleavage of the C–H
bond is compensated by the formation of stable C–Si and H–O
bonds.Spin-density isosurface (isovalue 0.007 e/A3) of VMgO-[010]-fo (a) and the dissociation of the C−H bond
of naphthalene on the VMgO-[010]-fo (b). Yellow density
indicates the spin-up population and red density the spin-down one.Table reports
the zero-point energy corrected adsorption energy for all PAHs on
the VMgO-[010]-fo based on the two studied mechanisms (perpendicular
and parallel). For the parallel adsorption, naphthalene, anthracene,
fluoranthene, and benzocoronene show comparable adsorption energies,
whereas pyrene show smaller exoergic adsorption energies than other
PAHs as discussed in “Binding Energy Analysis” section. For the perperndicular adsorption, the exoergicity
of benzocoronene is even larger (−5.48 eV) with respect to
those of all PAHs. Anthracene has a slightly lower adsorption energy
with respect to naphthalene and fluoranthene. This might reflect the
electron density is mainly localized in the central ring of anthracene
and is lower in the terminal ring (the ring bound with the surface).[67,73,74] However, on the vacancy surface,
anthracene prefers to bind with the terminal ring, not with the central
one, as the latter would require major structural changes. As a result,
the perpendicular adsorption energy of anthracene is not as large
as those for naphthalene and fluoranthene.
Table 4
Zero-Point Energy Corrected Adsorption
Energies for the Adsorption of PAHs on VMgO-[010]-fo through
a Perpendicular (Eads⊥) and Parallel (Eads=) Adsorption
Eads⊥ (eV)
Eads= (eV)
naphthalene
–3.73
–2.44
anthracene
–3.51
–2.97
fluoranthene
–3.84
–2.33
pyrene
–4.18
–1.49
coronene
–4.19
–2.43
benzocoronene
–5.48
–2.83
The adsorption energy trend, for the perpendicular
adsorption,
is the reverse of the parallel adsorption, in which anthracene is
more stabilized with respect to other PAHs because of the perfect
geometrical fit with the vacancy surface (see the discussion in the
“Interaction of PAHs and C60 with a Vacancy” section and Table ).The C–H dissociation through
a perpendicular adsorption
mechanism is more energetically favorable and, therefore, more likely
to happen with respect to the parallel adsorption (Table ). On the basis of the Bell–Evans–Polanyi
principle,[75,76] higher adsorption energies are
associated with low energy barriers, and because of the large exoergicity,
we would expect a barrierless process also for anthracene, fluoranthene,
pyrene, and coronene. Furthermore, a perpendicular adsorption does
not lead to aromaticity loss as this effect occurs only for the parallel
adsorption. The C atom of the PAH bound with a Si atom loses an H
atom, which is bound with the neighboring O atom, maintaining the
sp2 hybridization of the C.
Astrochemical and Cosmochemical Implications
The study
of the interaction of silicate minerals with PAHs in
star-forming regions is important because it may relate to the organic
composition of comets and asteroids. The latter locks up a variety
of organic molecules including the prebiotic building blocks of life
as well as PAHs.[18] During the star formation
evolution, silicate dust grains surrounding the protostar coagulate
to form planetesimals and cometesimals that eventually will lead to
planet formation. Therefore, the cometary and asteroidal composition
locks up valuable information about the processes that form molecules
in space.[4,18]In this study, we focused on crystalline
forsterite as the main
component of silicate grains, asteroids, and meteorites.[77,78] Silicate minerals in protoplanetary disks and the solar system often
have a crystalline nature, as revealed by observations of dust disks
around young stellar objects, comets, and asteroids.[79] In the interstellar medium (ISM), silicates have strong
infrared Si–O stretching mode and O–Si–O bending
mode absorption features around 9.7 and 18 μm, respectively.[80] Although IR observations reveal that interstellar
silicate grains lack large-scale order,[81] X-ray absorption studies reveal short-scale crystalline structures.[82] Possibly, interstellar silicates are polycrystalline,
and in that case, their adsorption behavior would be well described
by the study presented here. However, in the ISM, there is no direct
evidence of the presence of crystalline silicate, and thus, this issue
is still under investigation.[77,81]The composition
of the dust, asteroids, and meteorites (silicate
materials) is largely dominated by silicate structures belonging to
the olivine and pyroxene’s families with stoichiometric formulas
Mg2Fe2–2SiO4 and MgFe1–SiO3, respectively. The composition of
silicate materials in the universe is usually very rich in Mg and
poor in Fe (Mg/Fe ratios less than a few percent).[83] The trace of transition metals is embedded in forsterite
as point defects[28] (the presence of one
single atom per surface area), distortionary rearrangement of a perfect
crystal lattice, and Mg-, Si-, and MgO-Schottky vacancy.[27,31] Point defects might already have formed in the envelope of asymptotic
giant branch (AGB) stars or may reflect energetic processing of silicate
grains in the ISM by, for example, cosmic rays,[84,85] whereas thermal annealing and irradiation by the stars are the processes
taking place in protoplanetary disks.[86] Molecular dynamics simulations suggest the vacancy formation has
been preferentially formed around the AGB stars through O-loss or
Schottky defect creation.[31]Part
of the condensed dust in the ISM is formed by PAHs along with
other aromatic carbonaceous molecules because of the formation of
cluster agglomerates by the π-stacking of their aromatic skeleton.[87,88] In space, PAHs are important for maintaining the energy and ionization
balance in some regions of the interstellar medium as well as for
producing the most important molecule in the universe, H2.[40,73] In carbonaceous meteorites, PAHs were hypothesized
to be formed by the conversion of aliphatic compounds to aromatic
ones through post-Fischer–Tropsch synthesis at low temperature
catalyzed by minerals at 360–400 K. However, because of the
large abundance of nonalkylated PAHs with temperatures between 400
and 800 K, the hypothesis of PAH formation post-Fischer–Tropsch
synthesis was rejected.[89] Therefore, the
origin of PAHs in asteroidal settings is still to be clarified, whereas
it is clear that circumstellar regions and the ISM are the most likely
places for the formation of these aromatic compounds.[90]The silicates found in meteorites, specifically carbonaceous
chondrites,
have a characteristic composition of nonvolatile elements, for example,
Fe, Ni, and Mg, in which the abundance is comparable to the abundance
of elements observed in the Sun.[91,92]The
abundance of PAHs in the Murchinson carbonaceous meteorite
is about 1.82 mmol/g with a large abundance of PAHs with four aromatic
units.[93] PAHs with more than six aromatic
units such as coronene (C24H12) and benzocoronene
(C28H14) have not yet been identified in meteorites.
The presence of fullerene in meteorites is suspected and still needs
further clarifications.[94] Therefore, we
have considered studying the interaction of coronene and an analogous
molecule with an extra hexagonal ring (benzocoronene) along with fullerene
to clarify as to why large organic species have not yet been detected.The potential catalytic activity of forsterite and its defective
surfaces, revealed by this study, provides a new view on why large
PAHs might not be present in carbonaceous meteorites. The degradation
of PAHs, as we saw for the C−H activation on the vacancy surface,
is favorable for PAHs up to seven aromatic units. In the ISM the barrier
for H-loss from PAHs in the gas phase is 4.7 eV,[95] and it can be easily promoted by energetic UV-photons (about
12 eV). Astronomical models imply that photodestruction is more rapid
for small PAHs than for large PAHs.[6,96] In our calculations
based on the binding and adsorption energies, on a solid surface,
we see the opposite trend, and the dissociation rate is more favorable
for large PAHs, suggesting that defects in crystalline olivine might
catalyze the dissociation of the C–H bond of PAHs in an asteroidal
setting. Therefore, this work provides the basis for future astronomical
modeling and experimental studies. In particular, the dissociation
sequence of each C–H bond of PAHs as well as the estimation
of energy barriers for the pristine and metal-doped surfaces needs
to be clarified in future works.
Conclusions
In summary, we present a comprehensive
dispersion-corrected density
functional theory (DFT-D4) investigation of PAHs with the pristine
[010] forsterite surface and its defective surfaces, containing Fe
and Ni dopants or an MgO-Schottky vacancy. The lowest-energy adsorption
geometries and their binding energetics of naphthalene, anthracene,
fluoranthene, pyrene, coronene, benzocoronene, and fullerene on these
four [010] forsterite surfaces are unraveled. With the exception of
fullerene, all species adsorb on the surfaces maintaining angles and
dihedral angles close to the gas-phase configuration. A large surface
area allows large contact points (number of atomic interactions) with
the surface. Excluding the vacancy surface, we found that all organic
species, in this study, present larger binding energy on the Fe-[010]-fo
surface with respect to Ni and the pristine surface, which shows the
opposite behavior of benzene–cation complexes in the gas phase.
These small differences in the binding energy for the adsorption of
PAHs on pristine and transition-metal surfaces are caused by differences
in the number of contact points. The vacancy surface shows different
behaviors with respect to pristine and transition-metal surfaces because
of the formation of covalent C–O and C–Si bonds with
PAHs. Anthracene has a larger binding energy with respect to other
PAHs as a result of the formation of perfect and angles of 109° and 120° characteristic
of silane complexes. Deviations from these angles are reflected in
the differences in binding energy of PAHs on the vacancy surface.
Pyrene and coronene physisorb on the vacancy without covalent bond
formation. For the case of coronene, the physisorption causes the
reconstruction of Si–O bonds on the vacancy. Fullerene adsorption
occurs through the formation of C–O and C–Si bonds on
the six-membered ring analogous to PAHs chemisorption. The larger
binding energy of the chemisorption of fullerene on the vacancy reflects
the formation of covalent bonds that break the icosahedral symmetry
of the buckyball.We found that a barrierless adsorption is
possible for a parallel
orientation of the PAH with respect to the vacancy surface, and a
barrierless C−H dissociation is possible in the perpendicular
orientation. The latter is energetically more favorable than the parallel
adsorption. Therefore, the vacancy has potential catalytic activity
for the dissociation of the C−H bond of PAHs. For the C−H
dissociation process, the charge analysis has shown an electron donation
of the O atoms to the C atoms and electron attraction of the H to
the Si atom. This causes splitting of the C–H bond and the
formation of C–Si and O–H bonds on the surface. This
mechanism is similar to the electron-transfer mechanism of FLPs catalysts.Hence, forsterite surfaces with a vacancy show potential catalytic
activity for the dissociation of aromatic CH. Furthermore, the catalytic
potential of forsterite might shed light on the formation of the so-called
organic inventory of star-forming regions in space. This study will
be followed up with future studies on addressing the selectivity of
the vacancy for the dissociation of the hydrogen bound with different
carbon sites of the PAHs as well as clarifying the catalytic activity
of the pristine surfaces and how to release the fragmented PAH strongly
bound to the catalytic site.
Authors: Emilio Artacho; E Anglada; O Diéguez; J D Gale; A García; J Junquera; R M Martin; P Ordejón; J M Pruneda; D Sánchez-Portal; J M Soler Journal: J Phys Condens Matter Date: 2008-01-24 Impact factor: 2.333
Authors: Ask Hjorth Larsen; Jens Jørgen Mortensen; Jakob Blomqvist; Ivano E Castelli; Rune Christensen; Marcin Dułak; Jesper Friis; Michael N Groves; Bjørk Hammer; Cory Hargus; Eric D Hermes; Paul C Jennings; Peter Bjerre Jensen; James Kermode; John R Kitchin; Esben Leonhard Kolsbjerg; Joseph Kubal; Kristen Kaasbjerg; Steen Lysgaard; Jón Bergmann Maronsson; Tristan Maxson; Thomas Olsen; Lars Pastewka; Andrew Peterson; Carsten Rostgaard; Jakob Schiøtz; Ole Schütt; Mikkel Strange; Kristian S Thygesen; Tejs Vegge; Lasse Vilhelmsen; Michael Walter; Zhenhua Zeng; Karsten W Jacobsen Journal: J Phys Condens Matter Date: 2017-03-21 Impact factor: 2.333
Authors: Andrew J Westphal; Rhonda M Stroud; Hans A Bechtel; Frank E Brenker; Anna L Butterworth; George J Flynn; David R Frank; Zack Gainsforth; Jon K Hillier; Frank Postberg; Alexandre S Simionovici; Veerle J Sterken; Larry R Nittler; Carlton Allen; David Anderson; Asna Ansari; Saša Bajt; Ron K Bastien; Nabil Bassim; John Bridges; Donald E Brownlee; Mark Burchell; Manfred Burghammer; Hitesh Changela; Peter Cloetens; Andrew M Davis; Ryan Doll; Christine Floss; Eberhard Grün; Philipp R Heck; Peter Hoppe; Bruce Hudson; Joachim Huth; Anton Kearsley; Ashley J King; Barry Lai; Jan Leitner; Laurence Lemelle; Ariel Leonard; Hugues Leroux; Robert Lettieri; William Marchant; Ryan Ogliore; Wei Jia Ong; Mark C Price; Scott A Sandford; Juan-Angel Sans Tresseras; Sylvia Schmitz; Tom Schoonjans; Kate Schreiber; Geert Silversmit; Vicente A Solé; Ralf Srama; Frank Stadermann; Thomas Stephan; Julien Stodolna; Stephen Sutton; Mario Trieloff; Peter Tsou; Tolek Tyliszczak; Bart Vekemans; Laszlo Vincze; Joshua Von Korff; Naomi Wordsworth; Daniel Zevin; Michael E Zolensky Journal: Science Date: 2014-08-15 Impact factor: 47.728