Literature DB >> 16833550

Stacked clusters of polycyclic aromatic hydrocarbon molecules.

M Rapacioli1, F Calvo, F Spiegelman, C Joblin, D J Wales.   

Abstract

Clusters of polycyclic aromatic hydrocarbon (PAH) molecules are modeled using explicit all-atom potentials using a rigid-body approximation. The considered range of PAHs goes from pyrene (C10H8) to circumcoronene (C54H18) and clusters containing between 2 and 32 molecules are investigated. In addition to the usual repulsion-dispersion interactions, electrostatic point-charge interactions are incorporated, as obtained from density functional theory calculations. The general electrostatic distribution in neutral or singly charged PAHs is reproduced well using a fluctuating-charges analysis, which provides an adequate description of the multipolar distribution. Global optimization is performed using a variety of methods, including basin-hopping and parallel tempering Monte Carlo. We find evidence that stacking the PAH molecules generally yields the most stable motif. A structural transition between one-dimensional stacks and three-dimensional shapes built from multiple stacks is observed at larger sizes, and the threshold for this transition increases with the size of the monomer. Larger aggregates seem to evolve toward the packing observed for benzene in bulk. Difficulties met in optimizing these clusters are analyzed in terms of the strong anisotropy of the molecules. We also discuss segregation in heterogeneous clusters and vibrational properties in the context of astrophysical observations.

Entities:  

Year:  2005        PMID: 16833550     DOI: 10.1021/jp046745z

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  12 in total

1.  Charged polycyclic aromatic hydrocarbon clusters and the galactic extended red emission.

Authors:  Young Min Rhee; Timothy J Lee; Murthy S Gudipati; Louis J Allamandola; Martin Head-Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

2.  Resolving the interlayer distance of cationic pyrene clusters embedded in superfluid helium droplets using electron diffraction.

Authors:  Lei Lei; Jie Zhang; Marisol Trejo; Stephen D Bradford; Wei Kong
Journal:  J Chem Phys       Date:  2022-02-07       Impact factor: 3.488

3.  Effects of cluster formation on spectra of benzo[a]pyrene and benzo[e]pyrene.

Authors:  Silvina E Fioressi; R C Binning; Daniel E Bacelo
Journal:  Chem Phys Lett       Date:  2008-03-20       Impact factor: 2.328

4.  Structures and Energetics of Neutral and Cationic Pyrene Clusters.

Authors:  Léo Dontot; Fernand Spiegelman; Mathias Rapacioli
Journal:  J Phys Chem A       Date:  2019-10-29       Impact factor: 2.781

5.  Electron Diffraction of Pyrene Nanoclusters Embedded in Superfluid Helium Droplets.

Authors:  Lei Lei; Yuzhong Yao; Jie Zhang; Dale Tronrud; Wei Kong; Chengzhu Zhang; Lan Xue; Léo Dontot; Mathias Rapacioli
Journal:  J Phys Chem Lett       Date:  2020-01-16       Impact factor: 6.475

6.  Thermal evaporation of pyrene clusters.

Authors:  Sébastien Zamith; Ming-Chao Ji; Jean-Marc L'Hermite; Christine Joblin; Léo Dontot; Mathias Rapacioli; Fernand Spiegelman
Journal:  J Chem Phys       Date:  2019-11-21       Impact factor: 3.488

7.  Temperature-induced oligomerization of polycyclic aromatic hydrocarbons at ambient and high pressures.

Authors:  Artem D Chanyshev; Konstantin D Litasov; Yoshihiro Furukawa; Konstantin A Kokh; Anton F Shatskiy
Journal:  Sci Rep       Date:  2017-08-11       Impact factor: 4.379

8.  Size Effect in the Ionization Energy of PAH Clusters.

Authors:  C Joblin; L Dontot; G A Garcia; F Spiegelman; M Rapacioli; L Nahon; P Parneix; T Pino; P Bréchignac
Journal:  J Phys Chem Lett       Date:  2017-07-27       Impact factor: 6.475

9.  Synergistic and Antagonistic Effects of Aromatics on the Agglomeration of Gas Hydrates.

Authors:  Tai Bui; Deepak Monteiro; Loan Vo; Alberto Striolo
Journal:  Sci Rep       Date:  2020-03-26       Impact factor: 4.379

10.  Continuum Modelling for Interacting Coronene Molecules with a Carbon Nanotube.

Authors:  Kyle Stevens; Thien Tran-Duc; Ngamta Thamwattana; James M Hill
Journal:  Nanomaterials (Basel)       Date:  2020-01-15       Impact factor: 5.076

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