| Literature DB >> 36012454 |
Siddhee A Sahasrabudhe1, Marcia R Terluk1, Kyle D Rudser2, James C Cloyd1, Reena V Kartha1.
Abstract
The lack of reliable biomarkers is a significant challenge impeding progress in orphan drug development. For appropriate interpretation of intervention-based results or for evaluating candidate biomarkers, other things being equal, lower variability in biomarker measurement would be helpful. However, variability in rare disease biomarkers is often poorly understood. Type 1 Gaucher disease (GD1) is one such rare lysosomal storage disorder. Oxidative stress and inflammation have been linked to the pathophysiology of GD1 and validated measures of these processes can provide predictive value for treatment success or disease progression. This study was undertaken to investigate and compare the extent of longitudinal biological variation over a three-month period for various blood-based oxidative stress and inflammation markers in participants with GD1 on stable standard-of-care therapy (N = 13), treatment-naïve participants with GD1 (N = 5), and in age- and gender-matched healthy volunteers (N = 18). We utilized Bland-Altman plots for visual comparison of the biological variability among the three measurements. We also report group-wise means and the percentage of coefficient of variation (%CV) for 15 biomarkers. Qualitatively, we show specific markers (IL-1Ra, IL-8, and MIP-1b) to be consistently altered in GD1, irrespective of therapy status, highlighting the need for adjunctive therapies that can target and modulate these biomarkers. This information can help guide the selection of candidate biomarkers for future intervention-based studies in GD1 patients.Entities:
Keywords: Bland–Altman; Gaucher disease; biomarkers; inflammation; oxidative stress; therapy; variability
Mesh:
Substances:
Year: 2022 PMID: 36012454 PMCID: PMC9409136 DOI: 10.3390/ijms23169189
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 6.208
Participant demographics.
| Characteristic | Healthy Control (N = 18) | Gaucher Disease Type 1 (GD1) | |
|---|---|---|---|
| GD-Naïve (N = 5) | GD-Treated (N = 13) | ||
| Female | 9 (50%) | 3 (60.0%) | 8 (61.5%) |
| Caucasian | 12 (75.0%) | 5 (100%) | 12 (92.3%) |
| Age (in years) | 40.8 (15.3) | 60.0 (9.3) | 46.9 (12.0) |
| GD1 biomarkers | |||
| CHITO (nmoles/h/mL) | <78.5 * | 3590 (4182.5) 1 | 220 (224.2) 7 |
| ACE (IU/L) | 32.8–107.9 * | 95.6 (86.7) 2 | 62.8 (35.2) 5 |
| TRAP (IU/L) | 0.28–9.84 * | 25.2 (11.7) 3 | 7.18 (2.6) 8 |
| Complete blood count | |||
| Hemoglobin (g/L) | ND | 13.6 (1.7) | 14.4 (1.7) 2 |
| Hematocrit (%) | 39.4 (5.6) 1 | 42.3 (4.9) 2 | |
| Neutrophil (%) | 72.5 (0.7) 3 | 55.2 (7.4) 6 | |
| Lymphocyte (%) | 23.3 (9.2) 2 | 34.0 (6.8) 5 | |
| Eosinophils (%) | 1.5 (0.7) 3 | 2.83 (3.4) 6 | |
| WBC (×109/L) | 5.62 (1.0) | 6.02 (2.5) 3 | |
| Platelets (×109/L) | 122 (28.1) | 189 (65.5) 3 | |
| Mutational status | |||
| N370S/N370S | NA | 4 (80%) | 5 (38.5%) |
| N370S/L444P | 5 (38.5%) | ||
| N370S/unknown | 1 (7.7%) | ||
| N370S/R463C | 1 (7.7%) | ||
| Unknown | 1 (20%) | 1 (7.7%) | |
| GD1 therapy | |||
| Years on therapy | NA | NA | 16.1 (8.3) |
| ERT | NA | 6 (46.1%) | |
| SRT | NA | 7 (53.8%) | |
Values presented are mean (SD) or N (%) as indicated. Superscript denotes the number of missing values. * The values are reported from literature [24] and are presented as a range where applicable; NA, Not applicable; or ND, not available. Abbreviations: CHITO, chitotriosidase; ACE, angiotensin-converting enzyme; TRAP, tartrate-resistant acid phosphatase; ERT, enzyme replacement therapy; SRT, substrate reduction therapy.
Figure 1Bland–Altman plots for total GSH and GSH/GSSG comparing agreement between three repeat biomarker measurements for each individual. Upper and lower limits of agreement (dashed red lines) correspond to two standard deviations (SD) from the mean difference (solid black line).
Variability expressed as %CV, tabulated either overall or within different groups.
| Biomarker | %CV | %CV | %CV | %CV |
|---|---|---|---|---|
| Total GSH | 25.5 | 23.2 | 17.2 | 23.6 |
| Ratio GSH/GSSG | 82.6 | 58.6 | 16.7 | 86.7 |
| CAT Activity | 74.0 | 65.9 | 17.4 | 38.4 |
| SOD Activity | 55.7 | 66.4 | 29.7 | 42.7 |
| GPx Activity | 33.3 | 32.2 | 31.9 | 30.9 |
| Protein Carbonyl | 162.3 | 143.9 | 104.7 | 63.6 |
| MDA | 51.1 | 46.3 | 25.6 | 42.6 |
| IL1RA | 81.5 | 41.6 | 38.0 | 66.0 |
| IL-6 | 60.4 | 69.8 | 39.3 | 56.5 |
| IL-8 | 76.3 | 38.1 | 36.5 | 82.2 |
| MCP1 | 51.0 | 50.6 | 36.7 | 54.1 |
| MIP-1a | 164.7 | 81.3 | 205.9 | 173.1 |
| MIP-1b | 138.1 | 87.5 | 60.9 | 84.0 |
| TNFa | 85.9 | 113.7 | 52.7 | 67.1 |
| IL-10 | 701.6 * | 129.4 | 138.5 | 484.4 * |
* When the data for one participant from the GD-treated group was omitted because of apparent outlying measurements, %CV overall, %CV GD-treated were 114.1 and 86.1, respectively.
Figure 2Bland–Altman plots for other oxidative stress related biomarkers comparing agreement between three repeat biomarker measurements for each individual. Upper and lower limits of agreement (dashed red lines) correspond to two standard deviations (SD) from the mean difference (solid black line).
Figure 3Bland–Altman plots for inflammation related biomarkers comparing agreement between three repeat biomarker measurements for each individual. Upper and lower limits of agreement (dashed red lines) correspond to two standard deviations (SD) from the mean difference (solid black line). IL-10_modified: Data for one participant from the GD-treated group was omitted because of apparent outlying measurements.
Summary statistics for each biomarker separated by different groups.
| Biomarker | Healthy Control | GD-Naïve | GD-Treated |
|---|---|---|---|
| N = 18 | N = 5 | N = 13 | |
| Total_GSH (µg/mL) | |||
| Mean (SD) | 620 (144) | 516 (89) | 483 (114) |
| Median (IQR) | 614 (189) | 509 (122) | 439 (163) |
| Unknown | 6 | 0 | 2 |
| Ratio_GSHGSSG | |||
| Mean (SD) | 29 (17) | 6 (1) | 15 (13) |
| Median (IQR) | 27 (28) | 6 (2) | 10 (15) |
| Unknown | 5 | 0 | 2 |
| CAT_Activity (nmol/min/mL/mg) | |||
| Mean (SD) | 563 (371) | 321 (56) | 245 (94) |
| Median (IQR) | 388 (534) | 326 (71) | 244 (126) |
| Unknown | 4 | 0 | 2 |
| SOD_Activity (U/mL/mg) | |||
| Mean (SD) | 6.01 (3.99) | 4.71 (1.40) | 6.18 (2.64) |
| Median (IQR) | 4.95 (2.69) | 4.43 (1.36) | 5.68 (4.11) |
| Unknown | 4 | 0 | 2 |
| GPx_Activity (nmol/min/mL/mg) | |||
| Mean (SD) | 18.0 (5.8) | 14.1 (4.5) | 15.2 (4.7) |
| Median (IQR) | 19.2 (7.8) | 14.4 (5.7) | 15.0 (5.4) |
| Unknown | 4 | 0 | 2 |
| Protein_Carbonyl (nmol/mg) | |||
| Mean (SD) | 1.55 (2.23) | 0.43 (0.45) | 0.55 (0.35) |
| Median (IQR) | 0.64 (0.80) | 0.27 (0.33) | 0.54 (0.39) |
| Unknown | 4 | 0 | 1 |
| MDA (nM/mg) | |||
| Mean (SD) | 41 (19) | 90 (23) | 68 (29) |
| Median (IQR) | 38 (23) | 88 (17) | 65 (45) |
| Unknown | 4 | 1 | 1 |
| IL1RA (pg/mL) | |||
| Mean (SD) | 255 (106) | 1043 (396) | 694 (458) |
| Median (IQR) | 256 (155) | 1000 (513) | 619 (540) |
| Unknown | 5 | 0 | 1 |
| IL-6 (pg/mL) | |||
| Mean (SD) | 1.82 (1.27) | 2.14 (0.84) | 2.30 (1.30) |
| Median (IQR) | 2.29 (2.25) | 2.08 (0.95) | 2.26 (1.53) |
| Unknown | 5 | 0 | 1 |
| IL-8 (pg/mL) | |||
| Mean (SD) | 2.52 (0.96) | 6.94 (2.53) | 4.65 (3.82) |
| Median (IQR) | 2.56 (0.90) | 7.05 (2.35) | 3.13 (2.52) |
| Unknown | 5 | 0 | 1 |
| MCP1 (pg/mL) | |||
| Mean (SD) | 81 (41) | 90 (33) | 98 (53) |
| Median (IQR) | 68 (43) | 89 (32) | 78 (62) |
| Minimum–Maximum | 32–219 | 31–139 | 45–304 |
| Unknown | 5 | 0 | 1 |
| MIP-1a (pg/mL) | |||
| Mean (SD) | 16 (13) | 17 (35) | 26 (45) |
| Median (IQR) | 15 (22) | 0 (0) | 1 (36) |
| Minimum–Maximum | 0–43 | 0–102 | 0–194 |
| Unknown | 5 | 0 | 1 |
| MIP-1b (pg/mL) | |||
| Mean (SD) | 8 (7) | 87 (53) | 25 (21) |
| Median (IQR) | 7 (11) | 71 (51) | 22 (22) |
| Unknown | 5 | 0 | 1 |
| TNFa (pg/mL) | |||
| Mean (SD) | 0.73 (0.83) | 1.86 (0.98) | 1.40 (0.94) |
| Median (IQR) | 0.27 (1.27) | 1.84 (1.33) | 1.58 (1.35) |
| Unknown | 5 | 0 | 1 |
| IL-10 (U/mL) | |||
| Mean (SD) | 0.34 (0.44) | 0.39 (0.54) | 4.42 (21.41) * |
| Median (IQR) | 0.08 (0.91) | 0.08 (1.00) | 1.02 (1.17) * |
| Unknown | 5 | 0 | 1 |
* When data for one participant from the GD-treated group was omitted, because of apparent outlying measurements, the mean (SD) and median (IQR) were 0.72 (0.62) and 0.94 (1.14), respectively.