| Literature DB >> 36011604 |
Ming-Hong Hsieh1,2, Yi-Liang Wu1,3, Thomas Chang-Yao Tsao4, Yi-Wen Huang5,6, Jian-Cheng Lin6,7, Chia-Yi Lee7,8, Ming-Ju Hsieh9,10,11, Shun-Fa Yang6,7.
Abstract
The aim of the current study was to evaluate the combined effect of the single nucleotide polymorphism (SNP) in long non-coding RNA growth arrest-specific 5 (GAS5) and the phenotypes of epidermal growth factor receptor (EGFR) on the clinicopathological characteristics of lung adenocarcinoma. The present study examined the relationship between the GAS5 single-nucleotide polymorphisms (SNPs; rs145204276 Ins/Del, rs55829688 T/C) and the clinicopathological factors in 539 lung adenocarcinoma patients with or without EGFR mutations. We found that the genotype distributions of the two GAS5 SNPs between different EGFR genotypes were similar after adjusting for age, gender and smoking history. The GAS5 SNP rs145204276 Ins/Del + Del/Del illustrated a higher distribution with an advanced tumor stage (p = 0.030), larger tumor T status (p = 0.019), positive lymph node status (p = 0.014) and distal metastases (p = 0.011) in the EGFR wild type group. In the subgroup analysis of the EGFR wild type population, the presence of GAS5 SNP rs145204276 Ins/Del + Del/Del was correlated to an advanced tumor stage (p = 0.014) and distal metastases (p = 0.020) in non-smokers. In conclusion, these data indicate that the GAS5 SNP rs145204276 variant may help predict tumor stage, lymph node metastasis and distal metastases in patients with EGFR wild type lung adenocarcinoma.Entities:
Keywords: EGFR mutation; GAS5; lung cancer; polymorphism
Mesh:
Substances:
Year: 2022 PMID: 36011604 PMCID: PMC9407922 DOI: 10.3390/ijerph19169971
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 4.614
Demographics and clinical characteristics of 539 patients in lung adenocarcinoma with EGFR mutation status.
| Variable | EGFR Wild Type | EGFR Mutation | |
|---|---|---|---|
| Age | |||
| Mean ± SD | 64.63 ± 12.18 | 65.45 ± 12.55 | 0.453 |
| Gender | |||
| Male | 136 (61.5%) | 106 (33.3%) | 0.001 * |
| Female | 85 (38.5%) | 212 (66.7%) | |
| Cigarette smoking status | |||
| Never-smoker | 104 (47.1%) | 256 (80.5%) | 0.001 * |
| Ever-smoker | 117 (52.9%) | 62 (19.5%) | |
| Stage | |||
| I+II | 49 (22.2%) | 76 (23.9%) | 0.640 |
| III+IV | 172 (77.8%) | 242 (76.1%) | |
| Tumor T status | |||
| T1+T2 | 109 (49.3%) | 171 (53.8%) | 0.309 |
| T3+T4 | 112 (50.7%) | 147 (46.2%) | |
| Lymph node status | |||
| Negative | 60 (27.1%) | 89 (28.0%) | 0.831 |
| Positive | 161 (72.9%) | 229 (72.0%) | |
| Distant metastasis | |||
| Negative | 98 (44.3%) | 127 (39.9%) | 0.308 |
| Positive | 123 (55.7%) | 191 (60.1%) | |
| Cell differentiation | |||
| Well | 19 (8.6%) | 35 (11.0%) | <0.001 * |
| Moderately | 136 (61.5%) | 248 (78.0%) | |
| Poorly | 66 (29.9%) | 35 (11.0%) |
N: number; SD: standard deviation; * Denotes significant difference between the two groups.
Distribution frequency of GAS5 genotypes of patients with lung adenocarcinoma and multiple logistic regression analysis of EGFR mutation association.
| Genotypes | EGFR | EGFR Mutation (N = 318) | AOR (95% CI) | |
|---|---|---|---|---|
| rs145204276 | ||||
| Ins/Ins | 92 (41.6%) | 131 (41.2%) | 1.00 | |
| Ins/Del | 102 (46.2%) | 144 (45.3%) | 0.973 (0.655–1.445) | 0.891 |
| Del/Del | 27 (12.2%) | 43 (13.5%) | 1.064 (0.590–1.920) | 0.836 |
| Ins/Del + Del/Del | 129 (58.4%) | 187 (58.8%) | 0.992 (0.682–1.443) | 0.967 |
| rs55829688 | ||||
| TT | 100 (45.2%) | 166 (52.2%) | 1.00 | |
| TC | 99 (44.8%) | 121 (38.1%) | 0.787 (0.532–1.163) | 0.229 |
| CC | 22 (10.0%) | 31 (9.7%) | 0.678 (0.356–1.293) | 0.238 |
| TC + CC | 121 (54.8%) | 152 (47.8%) | 0.765 (0.528–1.108) | 0.157 |
N: number; AOR: adjusted odds ratio; CI: confidence interval.
Clinicopathologic characteristics of lung adenocarcinoma patients with EGFR mutations, stratified by polymorphic genotypes of GAS5 rs145204276.
| Variable | ALL (N = 539) | EGFR Wild type (N = 221) | EGFR Mutation (N = 318) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Ins/Ins | Ins/Del + Del/Del (N = 316) | Ins/Ins | Ins/Del + Del/Del (N = 129) | Ins/Ins | Ins/Del + Del/Del (N = 187) | ||||
| Stages | |||||||||
| I+II | 53 (23.8%) | 72 (22.8%) | 0.790 | 27 (29.3%) | 22 (17.1%) | 0.030 * | 26 (19.8%) | 50 (26.7%) | 0.156 |
| III+IV | 170 (76.2%) | 244 (77.2%) | 65 (70.7%) | 107 (82.9%) | 105 (80.2%) | 137 (73.3%) | |||
| Tumor T status | |||||||||
| T1+T2 | 126 (56.5%) | 154 (48.7%) | 0.075 | 54 (58.7%) | 55 (42.6%) | 0.019 * | 72 (55.0%) | 99 (52.9%) | 0.722 |
| T3+T4 | 97 (43.5%) | 162 (51.3%) | 38 (41.3%) | 74 (57.4%) | 59 (45.0%) | 88 (47.1%) | |||
| Lymph node status | |||||||||
| Negative | 65 (29.1%) | 84 (26.6%) | 0.512 | 33 (35.9%) | 27 (20.9%) | 0.014 * | 32 (24.4%) | 57 (30.5%) | 0.237 |
| Positive | 158 (70.9%) | 232 (73.4%) | 59 (64.1%) | 102 (79.1%) | 99 (75.6%) | 130 (69.5%) | |||
| Distant metastasis | |||||||||
| Negative | 99 (44.4%) | 126 (39.9%) | 0.294 | 50 (54.3%) | 48 (37.2%) | 0.011 * | 49 (37.4%) | 78 (41.7%) | 0.440 |
| Positive | 124 (55.6%) | 190 (60.1%) | 42 (45.7%) | 81 (62.8%) | 82 (62.6%) | 109 (58.3%) | |||
| Cell differentiation | |||||||||
| Well/Moderately | 179 (80.3%) | 259 (82.0%) | 0.620 | 62 (67.4%) | 93 (72.1%) | 0.452 | 117 (89.3%) | 166 (88.8%) | 0.879 |
| Poorly | 44 (19.7%) | 57 (18.0%) | 30 (32.6%) | 36 (27.9%) | 14 (10.7%) | 21 (11.2%) | |||
N: number; * Denotes significant difference between the two genotypes.
Clinicopathologic characteristics of lung adenocarcinoma patients with EGFR mutations, stratified by polymorphic genotypes of GAS5 rs55829688.
| Variable | ALL (N = 539) | EGFR Wild Type (N = 221) | EGFR Mutation (N = 318) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| TT | TC+CC | TT | TC+CC | TT | TC+CC | ||||
| Stages | |||||||||
| I+II | 70 (26.3%) | 55 (20.1%) | 0.090 | 25 (25.0%) | 24 (19.8%) | 0.358 | 45 (27.1%) | 31 (20.4%) | 0.161 |
| III+IV | 196 (73.7%) | 218 (79.9%) | 75 (75.0%) | 97 (80.2%) | 121 (72.9%) | 121 (79.6%) | |||
| Tumor T status | |||||||||
| T1+T2 | 144 (54.1%) | 136 (49.8%) | 0.316 | 52 (52.0%) | 57 (47.1%) | 0.469 | 92 (55.4%) | 79 (52.0%) | 0.538 |
| T3+T4 | 122 (45.9%) | 137 (50.2%) | 48 (48.0%) | 64 (52.9%) | 74 (44.6%) | 73 (48.0%) | |||
| Lymph node status | |||||||||
| Negative | 80 (30.1%) | 69 (25.3%) | 0.213 | 28 (28.0%) | 32 (26.4%) | 0.796 | 52 (31.3%) | 37 (24.3%) | 0.166 |
| Positive | 186 (69.9%) | 204 (74.7%) | 72 (72.0%) | 89 (73.6%) | 114 (68.7%) | 115 (75.7%) | |||
| Distant metastasis | |||||||||
| Negative | 119 (44.7%) | 106 (38.8%) | 0.164 | 50 (50.0%) | 48 (39.7%) | 0.124 | 69 (41.6%) | 58 (38.2%) | 0.535 |
| Positive | 147 (55.3%) | 167 (61.2%) | 50 (50.0%) | 73 (60.3%) | 97 (58.4%) | 94 (61.8%) | |||
| Cell differentiation | |||||||||
| Well/Moderately | 217 (81.6%) | 221 (81.0%) | 0.852 | 74 (74.0%) | 81 (66.9%) | 0.254 | 143 (86.1%) | 140 (92.1%) | 0.090 |
| Poorly | 49 (18.4%) | 52 (19.0%) | 21 (26.0%) | 47 (33.1%) | 23 (13.9%) | 12 (7.9%) | |||
N: number.
GAS5 rs145204276 genotype distribution and clinicopathologic characteristics of EGFR wild type lung adenocarcinoma patients with different cigarette smoking statuses.
| Variable | Non-Smoker (N = 104) | Ever-Smoker (N = 117) | ||||
|---|---|---|---|---|---|---|
| Ins/Ins | Ins/Del + Del/Del (N = 65) | Ins/Ins | Ins/Del + Del/Del (N = 64) | |||
| Stages | ||||||
| I+II | 15 (38.5%) | 11 (16.9%) | 0.014 * | 12 (22.6%) | 11 (17.2%) | 0.460 |
| III+IV | 24 (61.5%) | 54 (83.1%) | 41 (77.4%) | 53 (82.8%) | ||
| Tumor T status | ||||||
| T1+T2 | 23 (59.0%) | 27 (41.5%) | 0.085 | 31 (58.5%) | 28 (43.7%) | 0.112 |
| T3+T4 | 16 (41.0%) | 38 (58.5%) | 22 (41.5%) | 36 (56.3%) | ||
| Lymph node status | ||||||
| Negative | 15 (38.5%) | 16 (24.6%) | 0.135 | 18 (34.0%) | 11 (17.2%) | 0.036 * |
| Positive | 24 (61.5%) | 49 (75.4%) | 35 (66.0%) | 53 (82.8%) | ||
| Distant metastasis | ||||||
| Negative | 21 (53.8%) | 20 (30.8%) | 0.020 * | 29 (54.7%) | 28 (43.7%) | 0.237 |
| Positive | 18 (46.2%) | 45 (69.2%) | 24 (45.3%) | 36 (56.3%) | ||
| Cell differentiation | ||||||
| Well/Moderately | 27 (69.2%) | 48 (73.8%) | 0.611 | 35 (66.0%) | 45 (70.3%) | 0.621 |
| Poorly | 12 (30.8%) | 17 (26.2%) | 18 (34.0%) | 19 (29.7%) | ||
N: number; * Denotes significant difference between the two genotypes.