| Literature DB >> 36009130 |
Yan Zhao1,2,3,4, Jieming Zhang5, Yue Chen1,2,3,4, Jiehui Jiang1,6.
Abstract
OBJECTIVE: We explored a novel model based on deep learning radiomics (DLR) to differentiate Alzheimer's disease (AD) patients, mild cognitive impairment (MCI) patients and normal control (NC) subjects. This model was validated in an exploratory study using tau positron emission tomography (tau-PET) scans.Entities:
Keywords: Alzheimer’s disease; deep learning radiomics; mild cognitive impairment; tau positron emission tomography
Year: 2022 PMID: 36009130 PMCID: PMC9406185 DOI: 10.3390/brainsci12081067
Source DB: PubMed Journal: Brain Sci ISSN: 2076-3425
Figure 1The whole experimental process in this study.
Figure 2The flow chart of the data inclusion/exclusion criteria.
Figure 3The framework of the proposed DLR model.
Figure 4The fundamental structure of ResNet18 and ResNet34. “7 × 7” and “3 × 3” indicate the size of the convolution kernel, “conv” indicates convolution, “Avg Pool” indicates average pooling, and “FC” indicates fully connected layer. “64”, “128”, “128”, “256” and “512” represent the numbers of channels, and “/2” means stride of 2.
Demographic information in this study.
| NC Groups | MCI Groups | AD Groups | ||||
|---|---|---|---|---|---|---|
| NC1 (Train) | NC2 (Test) | MCI1 (Train) | MCI2 (Test) | AD1 (Train) | AD2 (Test) | |
|
| 69/121 | 10/11 | 95/83 | 13/6 | 62/43 | 5/7 |
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| 73.17 ± 7.64 | 76.76 ± 6.85 a | 73.88 ± 7.46 | 70.93 ± 8.21 | 75.39 ± 7.94 | 76.76 ± 9.38 |
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| 16.66 ± 2.34 | 17.10 ± 2.04 | 16.39 ± 2.56 | 16.05 ± 2.37 | 15.49 ± 2.59 | 15.33 ± 2.61 |
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| 29.11 ± 1.23 | 29.14 ± 1.06 | 27.78 ± 2.21 | 27.37 ± 2.31 | 21.36 ± 4.98 | 21.58 ± 3.55 |
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| 26.36 ± 2.55 | 25.00 ± 2.73 a | 23.24 ± 3.54 | 23.68 ± 3.16 | 16.15 ± 5.03 | 16.20 ± 4.64 |
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| 0.06 ± 0.23 | 0.10 ± 0.20 | 1.45 ± 1.03 | 2.37 ± 1.88 | 5.92 ± 3.32 | 5.13 ± 2.22 |
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| 8.69 ± 2.57 | 8.93 ± 1.86 | 12.59 ± 4.11 | 14.25 ± 3.08 a | 22.10 ± 7.29 | 25.03 ± 5.98 |
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| 12.46 ± 4.12 | 13.25 ± 2.99 | 19.01 ± 6.11 | 21.51 ± 5.10 a | 32.57 ± 8.64 | 36.11 ± 7.20 |
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| 2.51 ± 1.72 | 3.25 ± 2.00 | 4.77 ± 2.26 | 5.89 ± 2.35 a | 8.06 ± 1.32 | 8.25 ± 1.76 |
a indicated that the p value was less than 0.05 in comparison results between the training/validation and test groups under the same label.
Classification performance in NC vs. MCI.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| AlexNet | 94.26 ± 2.60 | 93.80 ± 2.92 | 94.70 ± 4.34 |
| ZF-Net | 94.28 ± 3.99 | 94.97 ± 3.64 | 93.66 ± 7.46 |
| ResNet18 | 95.78 ± 2.50 | 94.99 ± 4.70 | 96.51 ± 2.98 |
| ResNet34 | 95.32 ± 2.62 | 94.06 ± 3.74 | 96.49 ± 4.55 |
| InceptionV3 | 93.82 ± 3.94 | 93.02 ± 4.93 | 94.54 ± 6.39 |
|
| |||
| AlexNet | 81.25 ± 3.06 | 7947 ± 2.86 | 82.86 ± 3.83 |
| ZF-Net | 83.14 ± 3.24 | 78.37 ± 3.89 | 86.67 ± 5.95 |
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| ResNet34 | 87.00 ± 2.14 | 85.79 ± 2.12 | 88.10 ± 2.52 |
| InceptionV3 | 80.50 ± 3.58 | 77.89 ± 4.24 | 82.86 ± 5.79 |
The bold means this model performed best among others.
Classification performance in MCI vs. AD.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| AlexNet | 93.18 ± 4.36 | 89.33 ± 10.55 | 95.41 ± 3.59 |
| ZF-Net | 93.55 ± 5.19 | 91.37 ± 7.20 | 94.77 ± 5.16 |
| ResNet18 | 93.72 ± 3.40 | 90.47 ± 8.16 | 95.63 ± 4.22 |
| ResNet34 | 95.28 ± 2.50 | 94.76 ± 4.96 | 95.59 ± 3.03 |
| InceptionV3 | 97.45 ± 2.78 | 95.26 ± 6.77 | 98.75 ± 2.64 |
|
| |||
| AlexNet | 79.68 ± 5.12 | 64.17 ± 7.32 | 89.47 ± 4.81 |
| ZF-Net | 79.68 ± 2.40 | 62.50 ± 3.78 | 90.52 ± 2.34 |
| ResNet18 | 82.26 ± 1.78 | 73.33 ± 2.72 | 87.89 ± 2.14 |
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| InceptionV3 | 79.68 ± 2.14 | 74.17 ± 3.32 | 83.16 ± 3.48 |
The bold means this model performed best among others.
Classification performance in NC vs. AD.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| AlexNet | 97.36 ± 2.98 | 95.67 ± 7.25 | 98.27 ± 2.44 |
| ZF-Net | 98.30 ± 2.42 | 97.89 ± 5.09 | 98.53 ± 2.08 |
| ResNet18 | 97.17 ± 2.05 | 96.87 ± 4.42 | 97.32 ± 2.60 |
| ResNet34 | 98.10 ± 1.81 | 96.14 ± 5.87 | 99.14 ± 1.38 |
| InceptionV3 | 94.37 ± 3.53 | 91.29 ± 8.66 | 96.16 ± 3.13 |
|
| |||
| AlexNet | 94.24 ± 0.96 | 84.17 ± 2.63 | 100.0 ± 0.00 |
| ZF-Net | 93.64 ± 2.65 | 82.57 ± 7.34 | 100.0 ± 0.00 |
| ResNet18 | 96.97 ± 2.91 | 91.70 ± 3.50 | 100.0 ± 0.00 |
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|
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| InceptionV3 | 95.08 ± 3.14 | 89.58 ± 5.30 | 98.21 ± 0.96 |
The bold means this model performed best among others.
The classification performance in NC vs. MCI.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| SUVR model | 69.36 ± 7.94 | 63.53 ± 12.03 | 74.73 ± 10.74 |
| Traditional radiomics model | 69.05 ± 7.22 | 63.34 ± 13.34 | 74.28 ± 7.07 |
| Clinical model | 74.84 ± 8.48 | 80.13 ± 14.16 | 71.58 ± 12.05 |
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| |||
| SUVR model | 75.68 ± 2.63 | 62.32 ± 4.52 | 86.67 ± 2.92 |
| Traditional radiomics model | 72.02 ± 4.12 | 68.95 ± 9.22 | 74.76 ± 7.11 |
| Clinical model | 81.61 ± 3.23 | 83.11 ± 3.14 | 80.31 ± 6.38 |
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The bold means this model performed best among others.
Figure 5ROC curves for the four models in NC vs. MCI.
The classification performance in MCI vs. AD.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| SUVR model | 74.41 ± 8.15 | 55.39 ± 15.64 | 86.06 ± 8.88 |
| Traditional radiomics model | 70.20 ± 7.83 | 57.79 ± 13.64 | 81.58 ± 9.83 |
| Clinical model | 90.84 ± 4.95 | 84.59 ± 11.04 | 94.45 ± 5.00 |
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| SUVR model | 78.33 ± 4.27 | 62.67 ± 9.12 | 86.67 ± 2.92 |
| Traditional radiomics model | 79.68 ± 5.72 | 65.63 ± 10.97 | 88.95 ± 2.99 |
| Clinical model | 77.16 ± 2.95 | 88.17 ± 9.25 | 68.91 ± 7.64 |
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The bold means this model performed best among others.
Figure 6ROC curves for the four models in MCI vs. AD.
The classification performance in NC vs. AD.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
|
| |||
| SUVR model | 86.06 ± 6.18 | 73.43 ± 14.21 | 93.04 ± 6.06 |
| Traditional radiomics model | 78.65 ± 0.08 | 57.67 ± 16.64 | 87.06 ± 8.80 |
| Clinical model | 91.96 ± 5.44 | 99.06 ± 2.98 | 86.65 ± 8.04 |
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| SUVR model | 90.66 ± 0.85 | 74.96 ± 0.59 | 99.63 ± 1.33 |
| Traditional radiomics model | 85.58 ± 3.63 | 74.17 ± 9.43 | 95.24 ± 3.17 |
| Clinical model | 96.98 ± 0.21 | 92.78 ± 3.13 | 99.56 ± 2.17 |
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The bold means this model performed best among others.
Figure 7ROC curves for the four models in NC vs. AD.