Literature DB >> 36008655

A Proteomic Approach for the Quantification of Posttranslational Protein Lysine Acetylation in Candida albicans.

Raju Shivarathri1, Manju Chauhan1, Rounik Mazumdar2, Phan Canh Trinh2, Wolfgang Reiter3, Markus Hartl4, Karl Kuchler5, Neeraj Chauhan6,7.   

Abstract

Candida albicans is a normal component of the human microflora that colonizes mucosal/epithelial surfaces and the gastrointestinal tract as a commensal organism. However, in an immunocompromised host, it can cause life-threatening infections of high mortality and morbidity. Virulence as well as antifungal drug resistance of C. albicans is often regulated by posttranslational modifications (PTM) of proteins via lysine acetylation by lysine acetyltransferases. Here, we report an experimental approach using tandem mass tag (TMT) labeling for the detection and quantification of lysine acetylation of histone and nonhistone proteins in C. albicans.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Acetylation; Candida; Lysine acetyltransferase (KAT); Lysine deacetylase (KDAC); Posttranslational modification; TMT labeling

Mesh:

Substances:

Year:  2022        PMID: 36008655     DOI: 10.1007/978-1-0716-2549-1_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.

Authors:  Jürgen Cox; Matthias Mann
Journal:  Nat Biotechnol       Date:  2008-11-30       Impact factor: 54.908

2.  The Perseus computational platform for comprehensive analysis of (prote)omics data.

Authors:  Stefka Tyanova; Tikira Temu; Pavel Sinitcyn; Arthur Carlson; Marco Y Hein; Tamar Geiger; Matthias Mann; Jürgen Cox
Journal:  Nat Methods       Date:  2016-06-27       Impact factor: 28.547

3.  Dimethyl-Labeling-Based Quantification of the Lysine Acetylome and Proteome of Plants.

Authors:  Ines Lassowskat; Markus Hartl; Fabian Hosp; Paul J Boersema; Matthias Mann; Iris Finkemeier
Journal:  Methods Mol Biol       Date:  2017

4.  Off-line high-pH reversed-phase fractionation for in-depth phosphoproteomics.

Authors:  Tanveer S Batth; Chiara Francavilla; Jesper V Olsen
Journal:  J Proteome Res       Date:  2014-11-04       Impact factor: 4.466

5.  Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips.

Authors:  Juri Rappsilber; Matthias Mann; Yasushi Ishihama
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

6.  Systematic Analysis of the Lysine Acetylome in Candida albicans.

Authors:  Xiaowei Zhou; Guanyu Qian; Xingling Yi; Xiaofang Li; Weida Liu
Journal:  J Proteome Res       Date:  2016-06-28       Impact factor: 4.466

Review 7.  Lysine acetylation: codified crosstalk with other posttranslational modifications.

Authors:  Xiang-Jiao Yang; Edward Seto
Journal:  Mol Cell       Date:  2008-08-22       Impact factor: 17.970

8.  BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams.

Authors:  Tim Hulsen; Jacob de Vlieg; Wynand Alkema
Journal:  BMC Genomics       Date:  2008-10-16       Impact factor: 3.969

Review 9.  Fungal KATs/KDACs: A New Highway to Better Antifungal Drugs?

Authors:  Karl Kuchler; Sabrina Jenull; Raju Shivarathri; Neeraj Chauhan
Journal:  PLoS Pathog       Date:  2016-11-10       Impact factor: 6.823

10.  Fungal acetylome comparative analysis identifies an essential role of acetylation in human fungal pathogen virulence.

Authors:  Yanjian Li; Hailong Li; Mingfei Sui; Minghui Li; Jiamei Wang; Yang Meng; Tianshu Sun; Qiaojing Liang; Chenhao Suo; Xindi Gao; Chao Li; Zhuoran Li; Wei Du; Baihua Zhang; Sixiang Sai; Zhang Zhang; Jing Ye; Hongchen Wang; Shang Yue; Jiayi Li; Manli Zhong; Changbin Chen; Shouliang Qi; Ling Lu; Dancheng Li; Chen Ding
Journal:  Commun Biol       Date:  2019-05-01
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