Literature DB >> 3600650

A 12-base-pair sequence is an essential element of the ribosomal gene terminator in Xenopus laevis.

P Labhart, R H Reeder.   

Abstract

rRNA transcription in Xenopus laevis terminates near a 7-base-pair (bp) conserved sequence (T3 box) located 200 bp upstream of the site of transcription initiation for the adjacent gene promoter. We present evidence here that a 12-bp element containing the T3 box is an essential part of the terminator. Using an oocyte injection assay, we found that the 12-bp element (but not the T3 box alone) severely reduced the amount of RNA detectable at sites downstream from itself and that the T3 box within the 12-bp element was required to specify the formation of correct 3' ends. This requirement for the 12-bp element was also seen in pulse-label experiments by using a homogenate of oocyte nuclei, but the present data did not allow us to determine the exact mechanism by which the 12-bp element acts. Removal of the T3 region from its normal location allowed a significant amount of readthrough transcripts to accumulate, indicating that additional sequences may be required for complete terminator function.

Entities:  

Mesh:

Substances:

Year:  1987        PMID: 3600650      PMCID: PMC365294          DOI: 10.1128/mcb.7.5.1900-1905.1987

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  18 in total

1.  The ribosomal spacer in Xenopus laevis is transcribed as part of the primary ribosomal RNA.

Authors:  R F De Winter; T Moss
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

2.  A repeated 18 bp sequence motif in the mouse rDNA spacer mediates binding of a nuclear factor and transcription termination.

Authors:  I Grummt; H Rosenbauer; I Niedermeyer; U Maier; A Ohrlein
Journal:  Cell       Date:  1986-06-20       Impact factor: 41.582

3.  Efficient site-directed mutagenesis by simultaneous use of two primers.

Authors:  K Norris; F Norris; L Christiansen; N Fiil
Journal:  Nucleic Acids Res       Date:  1983-08-11       Impact factor: 16.971

4.  Transcription of mouse rDNA terminates downstream of the 3' end of 28S RNA and involves interaction of factors with repeated sequences in the 3' spacer.

Authors:  I Grummt; U Maier; A Ohrlein; N Hassouna; J P Bachellerie
Journal:  Cell       Date:  1985-12       Impact factor: 41.582

5.  Sequence organization of the spacer DNA in a ribosomal gene unit of Xenopus laevis.

Authors:  P Boseley; T Moss; M Mächler; R Portmann; M Birnstiel
Journal:  Cell       Date:  1979-05       Impact factor: 41.582

6.  The external transcribed spacer and preceding region of Xenopus borealis rDNA: comparison with the corresponding region of Xenopus laevis rDNA.

Authors:  J C Furlong; J Forbes; M Robertson; B E Maden
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

7.  Xenopus ribosomal gene enhancers function when inserted inside the gene they enhance.

Authors:  P Labhart; R H Reeder
Journal:  Nucleic Acids Res       Date:  1985-12-20       Impact factor: 16.971

8.  Nested control regions promote Xenopus ribosomal RNA synthesis by RNA polymerase I.

Authors:  B Sollner-Webb; J A Wilkinson; J Roan; R H Reeder
Journal:  Cell       Date:  1983-11       Impact factor: 41.582

9.  More ribosomal spacer sequences from Xenopus laevis.

Authors:  T Moss; P G Boseley; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1980-02-11       Impact factor: 16.971

10.  Characterization of three sites of RNA 3' end formation in the Xenopus ribosomal gene spacer.

Authors:  P Labhart; R H Reeder
Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

View more
  18 in total

Review 1.  Survey and summary: transcription by RNA polymerases I and III.

Authors:  M R Paule; R J White
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

2.  Characterization of two types of ribosomal gene transcription in Xenopus laevis oocytes.

Authors:  P Labhart
Journal:  Gene Expr       Date:  1992

3.  The Xenopus 9 bp ribosomal terminator (T3 box) is a pause signal for the RNA polymerase I elongation complex.

Authors:  P Labhart
Journal:  Nucleic Acids Res       Date:  1995-06-25       Impact factor: 16.971

4.  Molecular cloning and analysis of Schizosaccharomyces pombe Reb1p: sequence-specific recognition of two sites in the far upstream rDNA intergenic spacer.

Authors:  A Zhao; A Guo; Z Liu; L Pape
Journal:  Nucleic Acids Res       Date:  1997-02-15       Impact factor: 16.971

5.  A DNA-binding protein is required for termination of transcription by RNA polymerase I in Xenopus laevis.

Authors:  B McStay; R H Reeder
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

6.  Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe.

Authors:  Rahul Jaiswal; Malay Choudhury; Shamsu Zaman; Samarendra Singh; Vishaka Santosh; Deepak Bastia; Carlos R Escalante
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-28       Impact factor: 11.205

7.  Sequence elements essential for function of the Xenopus laevis ribosomal DNA enhancers.

Authors:  C S Pikaard; R H Reeder
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

8.  Transcription termination at the chicken beta H-globin gene.

Authors:  T M Pribyl; H G Martinson
Journal:  Mol Cell Biol       Date:  1988-12       Impact factor: 4.272

9.  Functional difference between the sites of ribosomal 40S precursor 3' end formation in Xenopus laevis and Xenopus borealis.

Authors:  P Labhart; R H Reeder
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

10.  Functional analysis of Arabidopsis thaliana rRNA gene and spacer promoters in vivo and by transient expression.

Authors:  J H Doelling; R J Gaudino; C S Pikaard
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-15       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.