| Literature DB >> 36003569 |
Elizabeth L Norton1, Bo Yang2.
Abstract
Entities:
Keywords: Loeys–Dietz syndrome; Marfan syndrome; aortic dissection; aortopathy; genetics; heritable thoracic aortic disease; thoracic aortic aneurysm
Year: 2021 PMID: 36003569 PMCID: PMC9390368 DOI: 10.1016/j.xjon.2021.01.013
Source DB: PubMed Journal: JTCVS Open ISSN: 2666-2736
Genes with strong or definitive evidence associated with syndromic and nonsyndromic heritable thoracic aortic disease
| Heritable thoracic aortic disease | Associated genes |
|---|---|
| Syndromic | |
| Marfan syndrome | |
| Loeys–Dietz syndrome | |
| Vascular Ehlers–Danlos syndrome | |
| Nonsyndromic |
Genetic testing for heritable thoracic aortic disease
| Name | Number of genes | Genetic panel genes | Turnaround time | |
|---|---|---|---|---|
| 1 | Invitae Aortopathy Comprehensive Panel | 24 | 10-21 calendar days (14 d on average) | |
| 2 | ARUP Aortopathy Panel | 21 | 3-6 wk | |
| 3 | OHSU Knight Diagnostic Laboratories Familial Aneurysm and Aortopathy Panel | 31 | ||
| 4 | Blueprint Genetics Aorta Panel | 52 | 4 wk | |
| 5 | labcorp GeneSec: Cardio-Familial Aortopathy Panel | 10 | 18-24 d | |
| 6 | GeneDx Marfan/TAAD Panel | 26 | 4 wk | |
| 7 | AmbryGenetics TAADNext | 35 | 14-21 d | |
| 8 | PreventionGenetics Familial Thoracic Aortic Aneurysm and Dissection Panel | 17 | 18 d on average | |
| 9 | Collagen Diagnostic Lab Arterial Aneurysm Panel | 25 | ||
| 10 | FulgentGenetics Marfan Syndrome and TAAD Panel | 33 | 3-5 wk | |
| 11 | EGL Genetics Marfan Syndrome, TAAD, and Related Disorders Panel | 17 | 6 wk | |
| 12 | Transgenomic Marfan Syndrome and Aortic Aneurysm Panel | 4 | 4-6 wk | |
| 13 | Evicore TAAD Panel | 23 | ||
| 14 | Connective Tissue Gene Tests Marfan Syndrome, Loeys–Dietz Syndrome, Familial TAAD, and Related Disorders Panel | 28 | 2-4 wk | |
| 15 | Mayo Clinic Laboratories Marfan Syndrome and Related Disorders Multi-Gene Panel | 21 | 2-4 wk | |
| 16 | Asper Cardiogenetics Familial TAAD and Related Syndromes NGS Panel | 19 | 6-9 wk | |
| 17 | CeGaT EDS, MFS, LDS, Aortic Aneurysm and Differential Diagnoses | 49 | 4-6 wk | |
| 18 | Color Hereditary Heart Health | 30 | ||
| 19 | DDC Clinic Molecular Diagnostics Laboratory Familial TAAD Panel | 10 | 4 wk or less |
OHSU, Oregon Health & Science University; TAAD, thoracic aortic aneurysm or dissection.
Add-on Preliminary-evidence Gene for Aortopathy; HCN4, MAT2A, SMAD6.
Deletion/duplication detection not available for this gene.
Some, or all, of the gene is duplicated in the genome.
The gene has suboptimal coverage (means <90% of the gene's target nucleotides are covered at >20× with mapping quality score (MQ >20) reads), and/or the gene has exons listed under test limitations section that are not included in the panel, as they are not sufficiently covered with high-quality sequence reads. ‡ or §The sensitivity to detect variants may be limited in these genes.
Several regions that cannot be reliably assessed with standard target enrichment protocols are not analyzed: KCNH2 exon 4, KCNQ1 exon 1, and TGFBR1 exon 1. In APOB, only positions known to impact familial hypercholesterolemia risk are analyzed: only chr2:g.21229159_21229161 (APOB codon 3527) is analyzed. For the LDLR promoter region, the detection of deletions, duplications, and complex structural rearrangements may be limited.
https://www.invitae.com/en/physician/tests/02301/#info-panel-assay_information.
https://ltd.aruplab.com/Tests/Pub/2006540.
https://www.ohsu.edu/lab-services/familial-aneurysm-and-aortopathy-panel.
https://blueprintgenetics.com/tests/panels/cardiology/aorta-panel/.
https://www.labcorp.com/tests/451432/geneseq-cardio-familial-aortopathy-profile.
https://www.genedx.com/wp-content/uploads/2018/04/Info_Sheetcardio_Marfan-TAAD_update-2_20_20.pdf.
https://www.ambrygen.com/providers/genetic-testing/12/cardiology/taadnext.
https://www.preventiongenetics.com/testInfo?val=Familial+Thoracic+Aortic+Aneurysm+and+Dissection+%28TAAD%29+Panel.
http://uwcpdx.org/core-familial-aneurysm-panel/.
https://www.fulgentgenetics.com/marfan-taad.
https://www.egl-eurofins.com/tests/MM099.
http://www.transgenomic.com/labs/cardiology/familion/marfan-taad.html.
https://www.evicore.com/-/media/files/evicore/clinical-guidelines/solution/lab-management/healthplan/test-specific-guidelines/taad_panel_testing_2020_v2.pdf.
https://www.ctgt.net/panel/marfan-syndrome-loeys-dietz-syndrome-familial-thoracic-aortic-aneurysms-dissections-and.
https://www.mayocliniclabs.com/test-catalog/Performance/63029.
https://www.asperbio.com/asper-cardiogenetics/familial-thoracic-aortic-aneurysm-and-dissection-and-related-syndromes-ngs-panel.
https://www.cegat.de/en/diagnostics/diagnostic-panels/connective-tissue-diseases/#CTD02.
https://support.color.com/en/articles/2393820-what-is-the-color-hereditary-heart-health-test
https://www.ddccliniclab.org/test/detail/familial-thoracic-aortic-aneurysms-ngs-panel.
Genes among panels 1-19
| Gene | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 19 (100%) | |
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 9 (47%) | |||||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 17 (89%) | |||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 19 (100%) | |
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 8 (42%) | ||||||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 10 (53%) | ||||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 8 (42%) | ||||||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 10 (53%) | ||||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 18 (95%) | ||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 17 (89%) | |||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 12 (63%) | ||||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 18 (95%) | ||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 17 (89%) | |||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 14 (74%) | ||||||
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 19 (100%) | |
| ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 19 (100%) |
Panels 1-19 in top row corresponds to panels 1-19 in the first column of Table 2.
Figure 1Genetic aortopathy is an important etiology of thoracic aortic aneurysms and dissections and clinical genetic testing should be considered in high-risk patients. Identification of a pathogenic in a known heritable thoracic aortic disease-associated gene should guide clinical decision-making and both when to operate and extent of resection should be tailored to the specific causative gene.