Literature DB >> 36002665

Oceanobacillus saliphilus sp. nov., Isolated from Saline-Alkali Soil in Heilongjiang Province, China.

Yu-Ting OuYang1, Meng-Meng Li1, Ai-Ping Lv1, Pin-Jiao Jin2, Lan Liu1, Ze-Tao Liu1, Jian-Yu Jiao1, Wen-Jun Li3,4, Li-Xiang Cao5, Shuang Wang6,7.   

Abstract

A novel bacterium, designated strain APA_H-1(4)T, was isolated from the saline-alkaline soil, Zhaodong, Heilongjiang Province, China. Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic position of the strain. Phylogenetic analysis indicated that the isolate belongs to the genus Oceanobacillus, and showed the highest sequence similarity to O. damuensis KCTC 33146T (98.35%, similarity) and 'O. massiliensis' DSM 24644 (98.32%). The average nucleotide identity values between strain APA_H-1(4)T and other members of the genus Oceanobacillus were lower than 82% recommended for distinguishing novel prokaryotic species. The digital DNA-DNA hybridization values of strain APA_H-1(4)T with O. damuensis KCTC 33146T and 'O. massiliensis' DSM 24644 were 13.60 and 17.60%, respectively. Cells of strain APA_H-1(4)T were Gram-staining positive, motile, aerobic, spore-forming rods (0.5-0.7 × 1.8-2.6 μm) with flagella. The growth was found to occur optimally at 37 °C. The whole-cell hydrolysate contained meso-diaminopimelic acid as the diagnostic cell wall diamino acid. The main detected polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, an unidentified phospholipid and an unidentified polar lipid. The predominant respiratory quinone was identified as menaquinone-7 (MK-7). The major cellular fatty acid (>10%) was anteiso-C15:0. The G + C content of the genomic DNA was determined to be 38.4% based on the draft genome sequence. Based on the comparative analysis of polyphasic taxonomic data, strain APA_H-1(4)T represents a novel species of the genus Oceanobacillus, for which the name Oceanobacillus saliphilus sp. nov. is proposed. The type strain is APA_H-1(4)T (=GDMCC 1.2239T = KCTC 43254T).
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

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Year:  2022        PMID: 36002665     DOI: 10.1007/s00284-022-02997-0

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.343


  26 in total

1.  Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.

Authors:  Yann Marcy; Cleber Ouverney; Elisabeth M Bik; Tina Lösekann; Natalia Ivanova; Hector Garcia Martin; Ernest Szeto; Darren Platt; Philip Hugenholtz; David A Relman; Stephen R Quake
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-09       Impact factor: 11.205

2.  Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely halotolerant and alkaliphilic species isolated from a depth of 1050 m on the Iheya Ridge.

Authors:  J Lu; Y Nogi; H Takami
Journal:  FEMS Microbiol Lett       Date:  2001-12-18       Impact factor: 2.742

3.  Oceanobacillus oncorhynchi sp. nov., a halotolerant obligate alkaliphile isolated from the skin of a rainbow trout (Oncorhynchus mykiss), and emended description of the genus Oceanobacillus.

Authors:  Isao Yumoto; Kikue Hirota; Yoshinobu Nodasaka; Kenji Nakajima
Journal:  Int J Syst Evol Microbiol       Date:  2005-07       Impact factor: 2.747

4.  Genomic Analysis of the Moderately Haloalkaliphilic Bacterium Oceanobacillus kimchii Strain X50T with Improved High-Quality Draft Genome Sequences.

Authors:  Dong-Wook Hyun; Tae Woong Whon; Joon-Yong Kim; Pil Soo Kim; Na-Ri Shin; Min-Soo Kim; Jin-Woo Bae
Journal:  J Microbiol Biotechnol       Date:  2015-12-28       Impact factor: 2.351

5.  Oceanobacillus chironomi sp. nov., a halotolerant and facultatively alkaliphilic species isolated from a chironomid egg mass.

Authors:  Dina Raats; Malka Halpern
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

6.  Oceanobacillus damuensis sp. nov. and Oceanobacillus rekensis sp. nov., isolated from saline alkali soil samples.

Authors:  Xiufeng Long; Renyuan Ye; Shuai Zhang; Bo Liu; Yuqin Zhang; Zhigang Zeng; Yongqiang Tian
Journal:  Antonie Van Leeuwenhoek       Date:  2015-07-14       Impact factor: 2.271

7.  Oceanobacillus halotolerans sp. nov., a bacterium isolated from salt lake in Xinjiang province, north-west China.

Authors:  Wen-Yong Zhu; Li Yang; Yong-Jiang Shi; Chang-Gai Mu; Yun Wang; Ya-Rong Kou; Min Yin; Shu-Kun Tang
Journal:  Arch Microbiol       Date:  2020-04-03       Impact factor: 2.552

8.  Oceanobacillus indicireducens sp. nov., a facultative alkaliphile that reduces an indigo dye.

Authors:  Kikue Hirota; Kenichi Aino; Yoshinobu Nodasaka; Isao Yumoto
Journal:  Int J Syst Evol Microbiol       Date:  2012-07-27       Impact factor: 2.747

9.  Insight into the function and evolution of the Wood-Ljungdahl pathway in Actinobacteria.

Authors:  Jian-Yu Jiao; Li Fu; Zheng-Shuang Hua; Lan Liu; Nimaichand Salam; Peng-Fei Liu; Ai-Ping Lv; Geng Wu; Wen-Dong Xian; Qiyun Zhu; En-Min Zhou; Bao-Zhu Fang; Aharon Oren; Brian P Hedlund; Hong-Chen Jiang; Rob Knight; Lei Cheng; Wen-Jun Li
Journal:  ISME J       Date:  2021-05-05       Impact factor: 11.217

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