Literature DB >> 22843722

Oceanobacillus indicireducens sp. nov., a facultative alkaliphile that reduces an indigo dye.

Kikue Hirota1, Kenichi Aino2,1, Yoshinobu Nodasaka3, Isao Yumoto2,1.   

Abstract

An indigo-reducing facultatively alkaliphilic and halophilic strain, designated strain A21(T), was isolated from a fermented Polygonum indigo (Polygonum tinctorium Lour.) liquor sample aged for 4 days prepared in a laboratory. 16S rRNA gene sequence phylogeny suggested that strain A21(T) was a member of the genus Oceanobacillus with the closest relative being the type strain of Oceanobacillus chironomi (similarity: 96.0 %). The cells of the isolate stained Gram-positive and were facultatively anaerobic straight rods that were motile by peritrichous flagella. The strain grew between 18 and 48 °C with optimum growth at 39 °C. It grew in the pH range of 7-12. It hydrolysed casein, gelatin and Tween 20 but not Tweens 40, 60 and 80, starch or DNA. No isoprenoid quinone was detected and the DNA G+C content was 39.7 mol%. The whole-cell fatty acid profile mainly consisted of iso-C15 : 0, anteiso-C15 : 0 and C16 : 0. DNA-DNA hybridization experiments with O. chironomi revealed 13 % relatedness. Owing to the differences in phenotypic and chemotaxonomic characteristics, and phylogenetic analyses based on 16S rRNA gene sequences and DNA-DNA relatedness data from reported Oceanobacillus species, the isolate merits classification as a representative of a novel species, for which the name Oceanobacillus indicireducens sp. nov. is proposed. The type strain is A21(T) ( = JCM 17251(T)  = NCIMB 14685(T)). The description of the genus Oceanobacillus is also emended.

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Year:  2012        PMID: 22843722     DOI: 10.1099/ijs.0.034579-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  12 in total

1.  Characterization of the microbiota in long- and short-term natural indigo fermentation.

Authors:  Zhihao Tu; Helena de Fátima Silva Lopes; Kensuke Igarashi; Isao Yumoto
Journal:  J Ind Microbiol Biotechnol       Date:  2019-08-20       Impact factor: 3.346

2.  Development of media to accelerate the isolation of indigo-reducing bacteria, which are difficult to isolate using conventional media.

Authors:  Masatoshi Nishita; Kikue Hirota; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-06-05       Impact factor: 3.312

3.  Analysis of microbiota involved in the aged natural fermentation of indigo.

Authors:  Takahiro Okamoto; Kenichi Aino; Takashi Narihiro; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-03-11       Impact factor: 3.312

4.  Insight into the bacterial diversity of fermentation woad dye vats as revealed by PCR-DGGE and pyrosequencing.

Authors:  Vesna Milanović; Andrea Osimani; Manuela Taccari; Cristiana Garofalo; Alessandro Butta; Francesca Clementi; Lucia Aquilanti
Journal:  J Ind Microbiol Biotechnol       Date:  2017-02-28       Impact factor: 3.346

5.  Oceanobacillus saliphilus sp. nov., Isolated from Saline-Alkali Soil in Heilongjiang Province, China.

Authors:  Yu-Ting OuYang; Meng-Meng Li; Ai-Ping Lv; Pin-Jiao Jin; Lan Liu; Ze-Tao Liu; Jian-Yu Jiao; Wen-Jun Li; Li-Xiang Cao; Shuang Wang
Journal:  Curr Microbiol       Date:  2022-08-24       Impact factor: 2.343

6.  Oceanobacillus halophilum sp. nov. isolated from a mangrove forest soil.

Authors:  Jia Tang; Guiqin Yang; Yueqiang Wang; Chu Wu; Shungui Zhou
Journal:  Curr Microbiol       Date:  2014-01-16       Impact factor: 2.188

7.  Genome sequence of Oceanobacillus picturae strain S1, an halophilic bacterium first isolated in human gut.

Authors:  Jean-Christophe Lagier; Saber Khelaifia; Esam Ibraheem Azhar; Olivier Croce; Fehmida Bibi; Asif Ahmad Jiman-Fatani; Muhammad Yasir; Huda Ben Helaby; Catherine Robert; Pierre-Edouard Fournier; Didier Raoult
Journal:  Stand Genomic Sci       Date:  2015-10-29

8.  Oceanobacillus aidingensis sp. nov., a moderately halophilic bacterium.

Authors:  Wenyan Liu; Su Sheng Yang
Journal:  Antonie Van Leeuwenhoek       Date:  2014-03-05       Impact factor: 2.271

9.  Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov.

Authors:  Véronique Roux; Matthieu Million; Catherine Robert; Alix Magne; Didier Raoult
Journal:  Stand Genomic Sci       Date:  2013-12-15

10.  Noncontiguous finished genome sequence and description of Virgibacillus massiliensis sp. nov., a moderately halophilic bacterium isolated from human gut.

Authors:  S Khelaifia; O Croce; J-C Lagier; C Robert; C Couderc; F Di Pinto; B Davoust; F Djossou; D Raoult; P-E Fournier
Journal:  New Microbes New Infect       Date:  2015-10-02
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