| Literature DB >> 35996160 |
Chae Jung Park1, Seo Hee Choi2, Jihwan Eom3, Hwa Kyung Byun4, Sung Soo Ahn1, Jong Hee Chang5, Se Hoon Kim6, Seung-Koo Lee1, Yae Won Park7, Hong In Yoon8.
Abstract
OBJECTIVES: This study investigated whether radiomic features can improve the prediction accuracy for tumor recurrence over clinicopathological features and if these features can be used to identify high-risk patients requiring adjuvant radiotherapy (ART) in WHO grade 2 meningiomas.Entities:
Keywords: Magnetic resonance imaging; Meningioma; Prognosis; Radiomics; Radiotherapy
Mesh:
Year: 2022 PMID: 35996160 PMCID: PMC9396861 DOI: 10.1186/s13014-022-02090-7
Source DB: PubMed Journal: Radiat Oncol ISSN: 1748-717X Impact factor: 4.309
Fig. 1Workflow of image preprocessing, radiomics feature extraction, and machine learning.
Fig. 2Comparison of median recurrence interval between patients with and without ART a in the entire cohort and b in high-risk patients of the test set (probability > 0.3, according to the combined clinicopathological and radiomics model). Kaplan–Meier curves of PFS c comparing patients with and without ART in the entire cohort and d comparing patient subgroups according to the utility of ART in high-risk patients. ART = adjuvant radiotherapy; PFS = progression-free survival. Data are presented as the median with a 95% confidence interval for each group
Patient characteristics in the training and test sets
| Clinical variables | Training set (n = 92) | P-valuea | Test set (n = 63) | P-valuea | P-valueb | ||
|---|---|---|---|---|---|---|---|
| Without tumor recurrence | With tumor recurrence | Without tumor recurrence | With tumor recurrence | ||||
| (n = 80) | (n = 12) | (n = 54) | (n = 9) | ||||
| Age (years) | 57.3 ± 14.6 | 54.4 ± 13.6 | 0.530 | 55.7 ± 14.1 | 67.7 ± 13.2 | 0.020 | 0.838 |
| Female ratio | 52 (65.0%) | 9 (75.0%) | 0.494 | 38 (70.4%) | 3 (33.3%) | 0.031 | 0.875 |
| Extent of resection | 0.011 | 0.045 | 0.535 | ||||
| GTR | 70 (87.5%) | 7 (58.3%) | 49 (90.7%) | 6 (66.7%) | |||
| STR | 10 (12.5%) | 5 (41.7%) | 5 (9.3%) | 3 (33.3%) | |||
| Ki-67 labeling index | 6.03 ± 4.81 | 6.96 ± 2.73 | 0.515 | 5.9 ± 4.3 | 8.2 ± 3.1 | 0.131 | 0.874 |
| < 5% | 32 (40.0%) | 3 (25.0%) | 0.076 | 29 (53.7%) | 1 (11.1%) | 0.018 | |
| ≥ 5% | 38 (47.5%) | 9 (75.0%) | 25 (46.3%) | 8 (88.9%) | |||
| ART | 0.659 | 0.517 | 0.595 | ||||
| Performed | 48 (60.0%) | 8 (66.7%) | 36 (66.7%) | 5 (55.6%) | |||
| Not performed | 32 (40.0%) | 4 (33.3%) | 18 (33.3%) | 4 (44.4%) | |||
| ART modalityc | 0.851 | 0.061 | 0.813 | ||||
| 3D-CRT | 5 (10.4%) | 2 (25.0%) | 2 (5.6%) | 2 (40.0%) | |||
| IMRT | 43 (89.6%) | 6 (75.0%) | 34 (94.4%) | 3 (60.0%) | |||
| ART dose (Gy)c | 57.3 ± 4.0 | 57.2 ± 6.7 | 0.956 | 58.3 ± 3.9 | 58.7 ± 2.6 | 0.853 | 0.204 |
Data are expressed as the mean with standard deviation in parentheses, median with interquartile range in parentheses, or number with percentage in parentheses
aCalculated from Student’s-t test for continuous variables and Chi-square test for categorical variables to compare the patient characteristics between the responder and non-responders from each training and test set
bCalculated from Student’s-t test for continuous variables and Chi-square test for categorical variables for the comparison of training and test sets
cData obtained from patients who underwent adjuvant radiotherapy following surgery
GTR: gross total resection; STR: subtotal resection; ART: adjuvant radiotherapy; RT: radiotherapy; 3D-CRT: three-dimensional conformal radiotherapy; IMRT: intensity modulated radiotherapy
Fig. 3Receiver operating characteristic curves of the radiomics model in the a training and b test sets
Performances of machine learning models for prediction of tumor recurrence in the training and test set
| Models | Training set | Test set | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| AUC (95% CI) | Accuracy (%) | Sensitivity (%) | Specificity (%) | P value | AUC (95% CI) | Accuracy (%) | Sensitivity (%) | Specificity (%) | P value | |
| Clinicopathological model | 0.67 (0.59–0.74) | 66.9 | 48.2 | 85.3 | Reference | 0.61 (0.44–0.78) | 81.3 | 33.3 | 89.1 | Reference |
| Clinicopathological + radiomics model | 0.78 (0.70–0.85) | 75.0 | 76.8 | 31.0 | 0.042 | 0.77 (0.60–0.94) | 70.3 | 66.7 | 70.9 | 0.192 |
AUC: area under the curve; CI: confidence interval; NRI: net reclassification index
Fig. 4Model interpretability of a combined clinicopathological and radiomics model for the prediction of tumor recurrence with SHAP in the training set. a Variance importance plot that lists the most significant variables in descending order. b Summary plot of feature impact on the decision of the model and interaction between the features in the model. A positive SHAP value indicates an increase in the probability of tumor recurrence. c Decision plot showing how the model predicts tumor recurrence. Starting at the bottom of the plot, the prediction line shows how the SHAP values accumulate from the base value to arrive at the model’s final score at the top of the plot and how each feature contributes to the overall prediction of tumor recurrence. d Force plot of a representative case of a patient with tumor recurrence. Red arrows represent feature effects that drive the prediction value higher, and blue arrows are those effects that drive the prediction value lower. Each arrow’s size represents the magnitude of the corresponding feature’s effect. Note that the extent of resection, 90th percentile from T1C, and Ki-67 labeling index largely push the model prediction score higher than the base value