| Literature DB >> 35983488 |
Hui Liu1, Xudan Shen2, Tunan Yu3, Yifan Wang3, Sheng Cai2, Xia Jiang4, Xiujun Cai1,3.
Abstract
Backgrounds: Vitamin D is considered as a nutrient protecting individuals against an array of diseases based on observational studies. Such a protective effect, however, has not been demonstrated by randomized controlled trials. This study aims to explore a putative causal role of vitamin D in common diseases through a two-sample Mendelian randomization (MR) framework.Entities:
Keywords: Biobank Japan; FinnGen study; Mendelian randomization; UK Biobank; vitamin D
Year: 2022 PMID: 35983488 PMCID: PMC9378956 DOI: 10.3389/fnut.2022.938356
Source DB: PubMed Journal: Front Nutr ISSN: 2296-861X
Figure 1Flowchart on the selection of instrumental variables.
Causal link between genetically predicted vitamin D in European population and diseases identified in individuals from Biobank Japan.
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| Graves' disease | Inverse-variance weighted | 41 | 1.71 (1.25–2.33) | 0.001 | 0.657 |
| Weighted median | 41 | 1.83 (1.18–2.83) | 0.007 | ||
| Maximum likelihood | 41 | 1.71 (1.24–2.38) | 0.001 | ||
| MR-Egger | 41 | 2.10 (1.29–3.42) | 0.005 | 0.264 | |
| MR-PRESSO | 41 | 1.71 (1.25–2.33) | 0.002 | 0.696 | |
| Cataract | Inverse-variance weighted | 41 | 1.14 (1.03–1.28) | 0.016 | 0.425 |
| Weighted median | 41 | 1.14 (0.99–1.32) | 0.076 | ||
| Maximum likelihood | 41 | 1.14 (1.03–1.27) | 0.014 | ||
| MR-Egger | 41 | 1.16 (0.98–1.36) | 0.089 | 0.851 | |
| MR-PRESSO | 41 | 1.14 (1.03–1.28) | 0.020 | 0.454 | |
| Esophageal cancer | Inverse-variance weighted | 41 | 0.66 (0.46–0.93) | 0.019 | 0.921 |
| Weighted median | 41 | 0.66 (0.38–1.12) | 0.123 | ||
| Maximum likelihood | 41 | 0.66 (0.43–1.00) | 0.050 | ||
| MR-Egger | 41 | 0.61 (0.33–1.13) | 0.124 | 0.733 | |
| MR-PRESSO | 41 | 0.66 (0.46–0.93) | 0.024 | 0.943 |
P indicates P value of heterogeneous from IVW approach, or P value of intercept from MR-Egger regression, or P value from Mendelian randomization pleiotropy residual sum and outlier (MR-PRESSO) global test.
Causal link between genetically predicted vitamin D in Asian population and diseases identified in individuals from Biobank Japan.
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| Graves' disease | Japanese population | 2 | 1.34 (0.040–50.66) | 0.875 | 0.040 |
| Indian population | 14 | 1.05 (0.74–1.49) | 0.773 | 0.374 | |
| Cataract | Japanese population | 2 | 1.94 (1.90–1.98) | <0.001 | 0.973 |
| Indian population | 14 | 1.08 (0.98–1.19) | 0.106 | 0.735 | |
| Esophageal cancer | Japanese population | 2 | 1.00 (0.08–13.13) | 0.998 | 0.253 |
| Indian population | 14 | 1.67 (1.08–2.57) | 0.020 | 0.438 |
P indicates P value of heterogeneous from IVW approach.
Causal link between genetically predicted vitamin D in European population and diseases identified in European individuals from FinnGen study.
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| Graves' disease | Inverse-variance weighted | 43 | 1.34 (0.91–1.98) | 0.136 | 0.132 |
| Weighted median | 43 | 1.25 (0.77–2.05) | 0.370 | ||
| Maximum likelihood | 43 | 1.34 (0.95–1.90) | 0.096 | ||
| MR-Egger | 43 | 1.35 (0.82–2.20) | 0.241 | 0.980 | |
| Senile cataract | Inverse-variance weighted | 43 | 0.99 (0.90–1.10) | 0.911 | 0.030 |
| Weighted median | 43 | 0.94 (0.83–1.08) | 0.389 | ||
| Maximum likelihood | 43 | 0.99 (0.91–1.08) | 0.893 | ||
| MR-Egger | 43 | 1.01 (0.89–1.15) | 0.823 | 0.601 | |
| Other cataract | Inverse-variance weighted | 43 | 0.84 (0.72–0.97) | 0.021 | 0.060 |
| Weighted median | 43 | 0.73 (0.59–0.89) | 0.002 | ||
| Maximum likelihood | 43 | 0.84 (0.73–0.95) | 0.007 | ||
| MR-Egger | 43 | 0.79 (0.65–0.95) | 0.019 | 0.322 | |
| Benign esophageal cancer | Inverse-variance weighted | 43 | 0.90 (0.42–1.95) | 0.793 | 0.933 |
| Weighted median | 43 | 1.52 (0.44–5.25) | 0.507 | ||
| Maximum likelihood | 43 | 0.90 (0.36–2.27) | 0.827 | ||
| MR-Egger | 43 | 1.43 (0.45–4.52) | 0.546 | 0.197 | |
| Malignant esophageal cancer | Inverse-variance weighted | 43 | 1.00 (0.48–2.08) | 0.998 | 0.185 |
| Weighted median | 43 | 0.77 (0.32–1.86) | 0.563 | ||
| Maximum likelihood | 43 | 1.00 (0.51–1.96) | 0.997 | ||
| MR-Egger | 43 | 0.68 (0.27–1.67) | 0.401 | 0.163 |
P indicates P value of heterogeneous from IVW approach, or P value of intercept from MR-Egger regression.