Literature DB >> 35972700

RNA splicing: a dual-edged sword for hepatocellular carcinoma.

Anjali Kashyap1, Greesham Tripathi2, Avantika Tripathi2, Rashmi Rao3, Manju Kashyap4,5, Anjali Bhat6, Deepak Kumar7, Anjali Rajhans2, Pravindra Kumar3, Darshan Shimoga Chandrashekar8, Riaz Mahmood9, Amjad Husain10,11, Hatem Zayed12, Alok Chandra Bharti13, Manoj Kumar Kashyap14,15.   

Abstract

RNA splicing is the fundamental process that brings diversity at the transcriptome and proteome levels. The spliceosome complex regulates minor and major processes of RNA splicing. Aberrant regulation is often associated with different diseases, including diabetes, stroke, hypertension, and cancer. In the majority of cancers, dysregulated alternative RNA splicing (ARS) events directly affect tumor progression, invasiveness, and often lead to poor survival of the patients. Alike the rest of the gastrointestinal malignancies, in hepatocellular carcinoma (HCC), which alone contributes to ~ 75% of the liver cancers, a large number of ARS events have been observed, including intron retention, exon skipping, presence of alternative 3'-splice site (3'SS), and alternative 5'-splice site (5'SS). These events are reported in spliceosome and non-spliceosome complexes genes. Molecules such as MCL1, Bcl-X, and BCL2 in different isoforms can behave as anti-apoptotic or pro-apoptotic, making the spliceosome complex a dual-edged sword. The anti-apoptotic isoforms of such molecules bring in resistance to chemotherapy or cornerstone drugs. However, in contrast, multiple malignant tumors, including HCC that target the pro-apoptotic favoring isoforms/variants favor apoptotic induction and make chemotherapy effective. Herein, we discuss different splicing events, aberrations, and antisense oligonucleotides (ASOs) in modulating RNA splicing in HCC tumorigenesis with a possible therapeutic outcome.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  ARS; Alternative RNA splicing; Cirrhosis; Exon skipping; Hepatocellular carcinoma; Hepatoma; Intron retention; NAFLD; NASH; RNA processing; RNA splicing; RNA-Seq; Spliceosome; Splicing factors; Transcript variants

Mesh:

Substances:

Year:  2022        PMID: 35972700     DOI: 10.1007/s12032-022-01726-8

Source DB:  PubMed          Journal:  Med Oncol        ISSN: 1357-0560            Impact factor:   3.738


  160 in total

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Authors:  Abhijit A Patel; Joan A Steitz
Journal:  Nat Rev Mol Cell Biol       Date:  2003-12       Impact factor: 94.444

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Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

Review 3.  Spliceosome structure and function.

Authors:  Cindy L Will; Reinhard Lührmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-07-01       Impact factor: 10.005

4.  Spliceosomes.

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Journal:  Curr Biol       Date:  2015-03-02       Impact factor: 10.834

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Journal:  Trends Genet       Date:  2018-11-19       Impact factor: 11.639

Review 6.  Impairment of pre-mRNA splicing in liver disease: mechanisms and consequences.

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Journal:  World J Gastroenterol       Date:  2010-07-07       Impact factor: 5.742

7.  Organization of the mevalonate kinase (MVK) gene and identification of novel mutations causing mevalonic aciduria and hyperimmunoglobulinaemia D and periodic fever syndrome.

Authors:  S M Houten; J Koster; G J Romeijn; J Frenkel; M Di Rocco; U Caruso; P Landrieu; R I Kelley; W Kuis; B T Poll-The; K M Gibson; R J Wanders; H R Waterham
Journal:  Eur J Hum Genet       Date:  2001-04       Impact factor: 4.246

8.  Expression of SLC22A1 variants may affect the response of hepatocellular carcinoma and cholangiocarcinoma to sorafenib.

Authors:  Elisa Herraez; Elisa Lozano; Rocio I R Macias; Javier Vaquero; Luis Bujanda; Jesus M Banales; Jose J G Marin; Oscar Briz
Journal:  Hepatology       Date:  2013-07-30       Impact factor: 17.425

9.  Relationship between changes in the exon-recognition machinery and SLC22A1 alternative splicing in hepatocellular carcinoma.

Authors:  Meraris Soto; Maria Reviejo; Ruba Al-Abdulla; Marta R Romero; Rocio I R Macias; Loreto Boix; Jordi Bruix; Maria A Serrano; Jose J G Marin
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2020-01-15       Impact factor: 5.187

10.  Spliceosome database: a tool for tracking components of the spliceosome.

Authors:  Ivan Cvitkovic; Melissa S Jurica
Journal:  Nucleic Acids Res       Date:  2012-10-30       Impact factor: 16.971

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