Literature DB >> 35972367

Developing Bottom-Up Induced Pluripotent Stem Cell Derived Solid Tumor Models Using Precision Genome Editing Technologies.

Kelsie L Becklin1,2,3, Garrett M Draper1,2,3, Rebecca A Madden1,2,3, Mitchell G Kluesner1,2,3, Tomoyuki Koga4,5, Miller Huang6,7, William A Weiss8,9, Logan G Spector1,2, David A Largaespada1,2,3, Branden S Moriarity1,2,3, Beau R Webber1,2,3.   

Abstract

Advances in genome and tissue engineering have spurred significant progress and opportunity for innovation in cancer modeling. Human induced pluripotent stem cells (iPSCs) are an established and powerful tool to study cellular processes in the context of disease-specific genetic backgrounds; however, their application to cancer has been limited by the resistance of many transformed cells to undergo successful reprogramming. Here, we review the status of human iPSC modeling of solid tumors in the context of genetic engineering, including how base and prime editing can be incorporated into "bottom-up" cancer modeling, a term we coined for iPSC-based cancer models using genetic engineering to induce transformation. This approach circumvents the need to reprogram cancer cells while allowing for dissection of the genetic mechanisms underlying transformation, progression, and metastasis with a high degree of precision and control. We also discuss the strengths and limitations of respective engineering approaches and outline experimental considerations for establishing future models.

Entities:  

Mesh:

Year:  2022        PMID: 35972367      PMCID: PMC9529369          DOI: 10.1089/crispr.2022.0032

Source DB:  PubMed          Journal:  CRISPR J        ISSN: 2573-1599


  254 in total

1.  Determination of the human cardiomyocyte mRNA and miRNA differentiation network by fine-scale profiling.

Authors:  Joshua E Babiarz; Morgane Ravon; Sriram Sridhar; Palanikumar Ravindran; Brad Swanson; Hans Bitter; Thomas Weiser; Eric Chiao; Ulrich Certa; Kyle L Kolaja
Journal:  Stem Cells Dev       Date:  2012-01-04       Impact factor: 3.272

Review 2.  A guide to genome engineering with programmable nucleases.

Authors:  Hyongbum Kim; Jin-Soo Kim
Journal:  Nat Rev Genet       Date:  2014-04-02       Impact factor: 53.242

3.  Modeling familial cancer with induced pluripotent stem cells.

Authors:  Dung-Fang Lee; Jie Su; Huen Suk Kim; Betty Chang; Dmitri Papatsenko; Ruiying Zhao; Ye Yuan; Julian Gingold; Weiya Xia; Henia Darr; Razmik Mirzayans; Mien-Chie Hung; Christoph Schaniel; Ihor R Lemischka
Journal:  Cell       Date:  2015-04-09       Impact factor: 41.582

4.  Ribosomal and hematopoietic defects in induced pluripotent stem cells derived from Diamond Blackfan anemia patients.

Authors:  Loïc Garçon; Jingping Ge; Shwetha H Manjunath; Jason A Mills; Marisa Apicella; Shefali Parikh; Lisa M Sullivan; Gregory M Podsakoff; Paul Gadue; Deborah L French; Philip J Mason; Monica Bessler; Mitchell J Weiss
Journal:  Blood       Date:  2013-06-06       Impact factor: 22.113

5.  Therapeutic base editing of human hematopoietic stem cells.

Authors:  Jing Zeng; Yuxuan Wu; Chunyan Ren; Jasmine Bonanno; Anne H Shen; Devlin Shea; Jason M Gehrke; Kendell Clement; Kevin Luk; Qiuming Yao; Rachel Kim; Scot A Wolfe; John P Manis; Luca Pinello; J Keith Joung; Daniel E Bauer
Journal:  Nat Med       Date:  2020-03-16       Impact factor: 53.440

6.  CRISPR RNA-guided activation of endogenous human genes.

Authors:  Morgan L Maeder; Samantha J Linder; Vincent M Cascio; Yanfang Fu; Quan H Ho; J Keith Joung
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

Review 7.  Targeting Oncogenic Mutant p53 for Cancer Therapy.

Authors:  Alejandro Parrales; Tomoo Iwakuma
Journal:  Front Oncol       Date:  2015-12-21       Impact factor: 6.244

Review 8.  New Model Systems and the Development of Targeted Therapies for the Treatment of Neurofibromatosis Type 1-Associated Malignant Peripheral Nerve Sheath Tumors.

Authors:  Kyle B Williams; David A Largaespada
Journal:  Genes (Basel)       Date:  2020-04-28       Impact factor: 4.141

9.  Human iPSC-Derived Neurons and Cerebral Organoids Establish Differential Effects of Germline NF1 Gene Mutations.

Authors:  Corina Anastasaki; Michelle L Wegscheid; Kelly Hartigan; Jason B Papke; Nathan D Kopp; Jiayang Chen; Olivia Cobb; Joseph D Dougherty; David H Gutmann
Journal:  Stem Cell Reports       Date:  2020-04-02       Impact factor: 7.765

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