Literature DB >> 35969799

Reply to Zhu et al.: Implications of CHRNB1 and ERBB2 in the pathobiology of myasthenia gravis.

Ruth Chia1, Sara Saez-Atienzar1, Daniel B Drachman2, Bryan J Traynor1,2,3,4.   

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Year:  2022        PMID: 35969799      PMCID: PMC9459306          DOI: 10.1073/pnas.2209096119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


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We commend the work performed by Zhu et al. providing additional insights into the pathogenesis of myasthenia gravis (1). In essence, they applied Mendelian randomization to genome-wide data that we recently made public for a large cohort of patients diagnosed with the neuromuscular disorder (2). This powerful approach identified genetic variants increasing the risk of developing myasthenia gravis by influencing gene expression. Their most exciting observations centered on CHRNB1 and ERBB2, two loci we discovered in our genomic and transcriptomic analyses (2). Their data corroborated our conclusions in that they found rs4151121 to influence the expression of CHRNB1 in skeletal muscle. ERBB2 was also implicated in their search, though the lead variant and tissue involved differed between the two studies. We had identified rs2102928 in skeletal muscle as the candidate variant affecting ERBB2 expression, whereas rs1565922 in peripheral nerves was implicated in this current analysis. These findings are not mutually exclusive and point to this myasthenia gravis–related gene operating across multiple tissues. Regardless of these subtle differences, the two studies hint at CHRNB1 and ERBB2 playing a prominent role in the pathobiology of myasthenia gravis. Given that ERBB2 can modulate the expression of acetylcholine receptor subunits (3, 4), future studies should explore how the expression of these genes in nerves and skeletal muscle mediate the disease process. Our findings also have clinical implications as patients carrying the risk allele could have persistently lower expression of acetylcholine receptors, which may explain why some patients fail to enter remission (4). These observations suggest that new therapies modulating CHRNB1 and ERBB2 expression may benefit treatment-refractory patients. To demonstrate how genomic information can provide useful starting points to consider for therapeutic interventions, we performed in silico druggability testing on additional gene targets identified from the prioritization analysis of our genome-wide association study data (5). This approach identified 14 gene targets as potentially druggable, three of which have existing approved drugs or therapeutic agents in clinical testing (milatuzumab, forigerimod, and oprozomib; see Table 1) (6–8).
Table 1.

List of prioritized druggable genes ranked according to their priority index (PI) scores

DrugCurrent disease indicationMechanism of actionGenePI rankPI ratingDruggabilitySeed gene
MilatuzumabOrphan drug status for MM and CLLHLA-DR antigens- associated invariant chain antagonist CD74 24.591N
ForigerimodPhase III trial for SLEHeat-shock cognate 71-kDa protein inhibitor HSPA8 124.118N
OprozomibOrphan drug status for MM and Waldenstrom's macroglobulinaemia26S proteosome inhibitor PSMD4 203.9615N
HLA-DRA 44.4821Y
HLA-DQA1 54.448Y
UBA52 64.4219N
HLA-DQB1 174.058N
AP1G1 184.001N
SH3GL2 193.963N
ARF1 223.934N
AP2B1 233.922N
AP1B1 253.871N
HLA-C 283.761Y
AP1S3 293.751N

Drugs that are approved or in clinical testing are highlighted in yellow. MM, multiple myeloma; CLL, chronic lymphocytic leukemia; SLE, systemic lupus erythematosus; Seed gene indicates if the prioritized gene was used as a seed gene (yes [Y] or no [N]).

List of prioritized druggable genes ranked according to their priority index (PI) scores Drugs that are approved or in clinical testing are highlighted in yellow. MM, multiple myeloma; CLL, chronic lymphocytic leukemia; SLE, systemic lupus erythematosus; Seed gene indicates if the prioritized gene was used as a seed gene (yes [Y] or no [N]). The work presented by Zhu et al. (1), together with our recent publication (2), demonstrates the value of genomic research in unraveling the pathogenesis of neurological diseases. Most notably, the insights provided by such large collaborative efforts pave the way for rational drug development and precision medicine efforts.
  8 in total

1.  Induction of acetylcholine receptor gene expression by ARIA requires activation of mitogen-activated protein kinase.

Authors:  J Si; Z Luo; L Mei
Journal:  J Biol Chem       Date:  1996-08-16       Impact factor: 5.157

2.  Open Targets Genetics: systematic identification of trait-associated genes using large-scale genetics and functional genomics.

Authors:  Maya Ghoussaini; Edward Mountjoy; Miguel Carmona; Gareth Peat; Ellen M Schmidt; Andrew Hercules; Luca Fumis; Alfredo Miranda; Denise Carvalho-Silva; Annalisa Buniello; Tony Burdett; James Hayhurst; Jarrod Baker; Javier Ferrer; Asier Gonzalez-Uriarte; Simon Jupp; Mohd Anisul Karim; Gautier Koscielny; Sandra Machlitt-Northen; Cinzia Malangone; Zoe May Pendlington; Paola Roncaglia; Daniel Suveges; Daniel Wright; Olga Vrousgou; Eliseo Papa; Helen Parkinson; Jacqueline A L MacArthur; John A Todd; Jeffrey C Barrett; Jeremy Schwartzentruber; David G Hulcoop; David Ochoa; Ellen M McDonagh; Ian Dunham
Journal:  Nucleic Acids Res       Date:  2021-01-08       Impact factor: 16.971

3.  An open approach to systematically prioritize causal variants and genes at all published human GWAS trait-associated loci.

Authors:  Edward Mountjoy; Ellen M Schmidt; Miguel Carmona; Jeremy Schwartzentruber; Gareth Peat; Alfredo Miranda; Luca Fumis; James Hayhurst; Annalisa Buniello; Mohd Anisul Karim; Daniel Wright; Andrew Hercules; Eliseo Papa; Eric B Fauman; Jeffrey C Barrett; John A Todd; David Ochoa; Ian Dunham; Maya Ghoussaini
Journal:  Nat Genet       Date:  2021-10-28       Impact factor: 38.330

4.  A genetics-led approach defines the drug target landscape of 30 immune-related traits.

Authors:  Hai Fang; Hans De Wolf; Bogdan Knezevic; Katie L Burnham; Julie Osgood; Anna Sanniti; Alicia Lledó Lara; Silva Kasela; Stephane De Cesco; Jörg K Wegner; Lahiru Handunnetthi; Fiona E McCann; Liye Chen; Takuya Sekine; Paul E Brennan; Brian D Marsden; David Damerell; Chris A O'Callaghan; Chas Bountra; Paul Bowness; Yvonne Sundström; Lili Milani; Louise Berg; Hinrich W Göhlmann; Pieter J Peeters; Benjamin P Fairfax; Michael Sundström; Julian C Knight
Journal:  Nat Genet       Date:  2019-06-28       Impact factor: 38.330

5.  ErbB3 and ErbB2/neu mediate the effect of heregulin on acetylcholine receptor gene expression in muscle: differential expression at the endplate.

Authors:  N Altiok; J L Bessereau; J P Changeux
Journal:  EMBO J       Date:  1995-09-01       Impact factor: 11.598

6.  Identification of genetic risk loci and prioritization of genes and pathways for myasthenia gravis: a genome-wide association study.

Authors:  Ruth Chia; Sara Saez-Atienzar; Natalie Murphy; Adriano Chiò; Cornelis Blauwendraat; Ricardo H Roda; Pentti J Tienari; Henry J Kaminski; Roberta Ricciardi; Melania Guida; Anna De Rosa; Loredana Petrucci; Amelia Evoli; Carlo Provenzano; Daniel B Drachman; Bryan J Traynor
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-01       Impact factor: 12.779

7.  Novel genes/loci validate the small effect size of ERBB2 in patients with myasthenia gravis.

Authors:  Zijun Zhu; Xinyu Chen; Chao Wang; Liang Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-15       Impact factor: 12.779

8.  Open Targets Platform: supporting systematic drug-target identification and prioritisation.

Authors:  David Ochoa; Andrew Hercules; Miguel Carmona; Daniel Suveges; Asier Gonzalez-Uriarte; Cinzia Malangone; Alfredo Miranda; Luca Fumis; Denise Carvalho-Silva; Michaela Spitzer; Jarrod Baker; Javier Ferrer; Arwa Raies; Olesya Razuvayevskaya; Adam Faulconbridge; Eirini Petsalaki; Prudence Mutowo; Sandra Machlitt-Northen; Gareth Peat; Elaine McAuley; Chuang Kee Ong; Edward Mountjoy; Maya Ghoussaini; Andrea Pierleoni; Eliseo Papa; Miguel Pignatelli; Gautier Koscielny; Mohd Karim; Jeremy Schwartzentruber; David G Hulcoop; Ian Dunham; Ellen M McDonagh
Journal:  Nucleic Acids Res       Date:  2021-01-08       Impact factor: 16.971

  8 in total

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