| Literature DB >> 35951527 |
Ausilah Alfraihat1, Amer F Samdani2, Sriram Balasubramanian1.
Abstract
BACKGROUND: Adolescent Idiopathic Scoliosis (AIS) is a three-dimensional (3D) spinal deformity characterized by coronal curvature and rotational deformity. Predicting curve progression is important for the selection and timing of treatment. Although there is a consensus in the literature regarding prognostic factors associated with curve progression, the order of importance, as well as the combination of factors that are most predictive of curve progression is unknown.Entities:
Mesh:
Year: 2022 PMID: 35951527 PMCID: PMC9371275 DOI: 10.1371/journal.pone.0273002
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.752
Description of continuous features.
| Measurement | Mean ± STD | Range |
|---|---|---|
| Initial major Cobb angle (°) | 48.9±13.9 | (10.9–99.5) |
| Initial kyphosis angle T2-T12 (°) | 24.2±10.9 | (0–51.3) |
| Initial lumbar lordosis angle L1-L5 (°) | 53.6±12.1 | (3.4–87.1) |
| Age at first visit (Years) | 12.7±1.7 | (10–17.8) |
| Age at last visit (Years) | 13.6±1.6 | (10.4–18.6) |
| Apex wedge angle (°) | 56.7±4.1 | (0–21) |
| Time span (Years) | 0.9±1 | (0.08–6.5) |
| Flexibility (%) | 57±19.3 | (0.05–0.99) |
| Apex axial rotation (°) | 20.9±7.9 | (0.02–41.6) |
| Final major Cobb angle (°) | 59.4±12.4 | (35.7–107) |
Description of categorical features.
| Feature | Frequency (i.e., number of patients) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Gender | Female | Male | ||||||||
| 169 | 24 | |||||||||
| Lenke type | 1 | 2 | 3 | 4 | 5 | 6 | ||||
| 116 | 11 | 38 | 1 | 15 | 12 | |||||
| Brace status | Brace | No Brace | ||||||||
| 143 | 50 | |||||||||
| Apex location | T6 | T7 | T8 | T9 | T10 | T11 | T12 | L1 | L2 | L3 |
| 3 | 14 | 59 | 61 | 17 | 7 | 8 | 14 | 9 | 1 | |
| Number of levels involved | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |||
| 2 | 7 | 44 | 76 | 44 | 12 | 8 | ||||
| Risser "+" stage at the first visit | 0- | 0+ | 1 | 2 | 3 | 3/4 | 4 | 5 | ||
| 74 | 38 | 10 | 14 | 13 | 12 | 16 | 16 | |||
Fig 1Steps of Cobb angle measurement from frontal radiographs.
a. Plain frontal X-ray b. Four LMPs were selected per vertebra c. Polygon fit through each vertebra vertices (LMPs) d. Best fit ellipse through each polygon to calculate the orientation of each vertebra as the angle between the major axis of the ellipse and the horizontal e. A cubic spline was fit through the centroids of the vertebrae, the most tilted vertebrae above and below the apical level were identified, and the Cobb angle was calculated between these vertebrae.
Fig 2Exemplar flexibility measurement.
Indices of input features to RF model.
| Index | Feature |
|---|---|
| 0 | Initial lumbar lordosis angle |
| 1 | Initial thoracic kyphosis angle |
| 2 | Age at the first visit |
| 3 | Age at last visit |
| 4 | Time-span |
| 5 | Apex wedge angle |
| 6 | Lenke type |
| 7 | Flexibility |
| 8 | Apex axial rotation |
| 9 | Initial major Cobb angle |
| 10 | Brace status |
| 11 | Gender |
| 12 | Number of levels involved |
| 13 | Apex location |
| 14 | Risser "+" stage at the first visit |
Fig 3Flowchart of the curve progression model deployment.
Output from SBFS ranked in descending order.
| Number of features | Features Indices | 5-fold cross-validation Average MAE scores (Standard Deviation) | Confidence Interval (CI) bound |
|---|---|---|---|
|
|
|
|
|
| 6 | (0, 3, 7, 9, 12, 14) | 6.180 (0.97) | 1.25 |
| 8 | (1, 2, 3, 4, 7, 9, 12, 14) | 6.188 (0.95) | 1.23 |
| 9 | (1, 2, 3, 4, 6, 7, 9, 12, 14) | 6.193 (1.04) | 1.33 |
| 6 | (3, 7, 9, 12, 14) | 6.194 (0.97) | 1.25 |
| 10 | (0, 1, 2, 3, 4, 6, 7, 9, 12, 14) | 6.201 (1.11) | 1.42 |
| 4 | (7, 9, 12, 14) | 6.220 (1.01) | 1.30 |
| 11 | (0, 1, 2, 3, 4, 5, 6, 7, 9, 12, 14) | 6.224 (1.10) | 1.42 |
| 12 | (0, 1, 2, 3, 4, 5, 6, 7, 9, 12, 13, 14) | 6.261 (1.11) | 1.42 |
| 3 | (9, 12, 14) | 6.280 (0.95) | 1.22 |
| 13 | (0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 14) | 6.296 (1.08) | 1.39 |
| 2 | (9, 14) | 6.381 (0.87) | 1.12 |
| 14 | (0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 12, 13, 14) | 6.390 (1.21) | 1.55 |
| 15 | (0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14) | 6.557 (1.30) | 1.67 |
| 1 | 9 | 6.807 (0.79) | 1.01 |
MAE of final major Cobb angle prediction, CI represents the 95% confidence interval around the computed cross-validation scores.
Hyperparameters grid values and the selected values for optimized models.
| Hyperparameter | Range of values | Selected Value |
|---|---|---|
| Random Forest | ||
| n_estimators | [100–500] | 291 |
| max_features | [1–7] | 5 |
| max_depth | [1–50] | 30 |
| min_samples_split | [2–11] | 7 |
| min_samples_leaf | [1–11] | 2 |
| Support Vector Machine | ||
| Epsilon | [0,1,10,100,1000] | 0 |
| Gamma | [1,0.1,0.001,0.0001] | 0.001 |
| Artificial Neural Network | ||
| batch_size | [10,20,30,40,50] | 10 |
| epochs | [10,20,30,40,50] | 50 |
| Optimizer | [’adam’, ’rmsprop’] | rmsprop |
Performance of the ML models in terms of Mean Absolute Error (MAE).
| Model | 5-Fold cross validation Training | Testing |
|---|---|---|
| Random Forest | 3.54 | 4.64 |
| Gradient Boosting Regressor | 3.72 | 4.79 |
| Support Vector Machine | 6.14 | 6.84 |
| Artificial Neural Network | 4.77 | 5.82 |
Fig 4a. Rank of feature importance of most predictive features b. Frequency of prediction error of the testing dataset.
Rank and weights of most important features to predict curve progression.
| Rank | Feature | Importance (Weight) |
|---|---|---|
| 1 | Initial major Cobb angle | 0.676 |
| 2 | Flexibility | 0.134 |
| 3 | Initial lumbar lordosis angle | 0.046 |
| 4 | Initial thoracic kyphosis angle | 0.043 |
| 5 | Age at last visit | 0.042 |
| 6 | Number of levels involved | 0.033 |
| 7 | Risser "+" stage at the first visit | 0.027 |