Literature DB >> 35948746

Molecular Dynamics Modeling Based Investigation of the Effect of Freezing Rate on Lysozyme Stability.

Tibo Duran1, Bruna Minatovicz2, Ryan Bellucci3, Jun Bai4, Bodhisattwa Chaudhuri5,6,7.   

Abstract

PURPOSE: The stability of protein drug products frozen during fill finish operations is greatly affected by the freezing rate applied. Non-optimal freezing rates may lead to the denaturation of protein's complex macromolecular conformation. However, limited work has been done to address the effect of different freezing rates on protein stability at nano-scale level.
METHODS: The stability of a model protein, lysozyme, was investigated at atomic and molecular scale under varying freezing rates and moving ice-water interface. Ice seeding approach was adopted to initiate ice formation in this present simulation.
RESULTS: The faster freezing rate (11-12 K/490 ns) applied resulted in overall smaller ice fraction within the simulation box with a larger freeze-concentrated liquid (FCL) region. Consequently, the faster freezing rate better maintained protein stability with less secondary structure deviations, higher hydration level and structural compactness, and less fluctuations at individual residues than observed following slow (5-6 K/490 ns) and medium (7-8 K/490 ns) freezing rates. The present study also identified the residues near and within helices 3, 6, 7, and 8 dominate the structural instability of the lysozyme at 247 K freezing temperature.
CONCLUSIONS: For the first time, ice formation in therapeutic protein solution was studied "non-isothermally" at different freezing rates using molecular dynamics simulations. Thus, a good understanding of freezing rates on protein instability was revealed by applying the developed computational model.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  freezing rate; ice-water interface; molecular dynamics simulations; protein stability

Mesh:

Substances:

Year:  2022        PMID: 35948746     DOI: 10.1007/s11095-022-03358-z

Source DB:  PubMed          Journal:  Pharm Res        ISSN: 0724-8741            Impact factor:   4.580


  23 in total

1.  Mechanism of protein stabilization by sugars during freeze-drying and storage: native structure preservation, specific interaction, and/or immobilization in a glassy matrix?

Authors:  Liuquan Lucy Chang; Deanna Shepherd; Joanna Sun; David Ouellette; Kathleen L Grant; Xiaolin Charlie Tang; Michael J Pikal
Journal:  J Pharm Sci       Date:  2005-07       Impact factor: 3.534

Review 2.  Physical characterization of pharmaceutical formulations in frozen and freeze-dried solid states: techniques and applications in freeze-drying development.

Authors:  Jinsong Liu
Journal:  Pharm Dev Technol       Date:  2006-02       Impact factor: 3.133

3.  Study of the individual contributions of ice formation and freeze-concentration on isothermal stability of lactate dehydrogenase during freezing.

Authors:  Bakul S Bhatnagar; Michael J Pikal; Robin H Bogner
Journal:  J Pharm Sci       Date:  2008-02       Impact factor: 3.534

Review 4.  Phase separation of excipients during lyophilization: effects on protein stability.

Authors:  T W Randolph
Journal:  J Pharm Sci       Date:  1997-11       Impact factor: 3.534

5.  Surface-induced denaturation of proteins during freezing and its inhibition by surfactants.

Authors:  B S Chang; B S Kendrick; J F Carpenter
Journal:  J Pharm Sci       Date:  1996-12       Impact factor: 3.534

6.  Effect of Controlled Ice Nucleation on Stability of Lactate Dehydrogenase During Freeze-Drying.

Authors:  Rui Fang; Kazunari Tanaka; Vamsi Mudhivarthi; Robin H Bogner; Michael J Pikal
Journal:  J Pharm Sci       Date:  2017-10-23       Impact factor: 3.534

7.  Reversible Self-Association in Lactate Dehydrogenase during Freeze-Thaw in Buffered Solutions Using Neutron Scattering.

Authors:  Jayesh Sonje; Seema Thakral; Susan Krueger; Raj Suryanarayanan
Journal:  Mol Pharm       Date:  2021-10-28       Impact factor: 4.939

8.  Freezing-induced phase separation and spatial microheterogeneity in protein solutions.

Authors:  Jinping Dong; Allison Hubel; John C Bischof; Alptekin Aksan
Journal:  J Phys Chem B       Date:  2009-07-30       Impact factor: 2.991

9.  Protein quantity on the air-solid interface determines degradation rates of human growth hormone in lyophilized samples.

Authors:  Yemin Xu; Pawel Grobelny; Alexander Von Allmen; Korben Knudson; Michael Pikal; John F Carpenter; Theodore W Randolph
Journal:  J Pharm Sci       Date:  2014-03-12       Impact factor: 3.534

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