Literature DB >> 35920985

Vibrio tetraodonis subsp. pristinus subsp. nov., isolated from the coral Acropora cytherea at Palmyra Atoll, and creation and emended description of Vibrio tetraodonis subsp. tetraodonis subsp. nov.

Rachel M Loughran1,2, Sarah A Emsley1, Tori Jefferson3, Benjamin J Wasson1, Monica C Deadmond1, Taylor L Knauss1, Kaysa M Pfannmuller1, Katherine J Lippert1,4, Gregory Miller5, Lauren C Cline6, David K Oline1, Marc J Koyack7, Silvia Grant-Beurmann8, Michael O Gaylor9, Jimmy H Saw10, Blake Ushijima11, Patrick Videau12,13.   

Abstract

Strain OCN044T was isolated from the homogenised tissue and mucus of an apparently healthy Acropora cytherea coral fragment collected from the western reef terrace of Palmyra Atoll in the Northern Line Islands and was taxonomically evaluated with a polyphasic approach. The morphological and chemotaxonomic properties are consistent with characteristics of the genus Vibrio: Gram-stain-negative rods, oxidase- and catalase-positive, and motile by means of a polar flagellum. Strain OCN044T can be differentiated as a novel subspecies based on 21 differences among chemotaxonomic features (e.g., fatty acids percentages for C12:0 and C18:1 ω7c), enzymatic activities (e.g., DNase and cystine arylamidase), and carbon sources utilized (e.g., L-xylose and D-melezitose) from its nearest genetic relative. Phylogenetic analysis and genomic comparisons show close evolutionary relatedness to Vibrio tetraodonis A511T but the overall genomic relatedness indices identify strain OCN044T as a distinct subspecies. Based on a polyphasic characterisation, differences in genomic and taxonomic data, strain OCN044T represents a novel subspecies of V. tetraodonis A511T, for which the name Vibrio tetraodonis subsp. pristinus subsp. nov. is proposed. The type strain is OCN044T (= LMG 31895T = DSM 111778T).
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Coral; Environmental isolate; Vibrio

Mesh:

Substances:

Year:  2022        PMID: 35920985     DOI: 10.1007/s10482-022-01766-0

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.158


  52 in total

1.  Fast and sensitive protein alignment using DIAMOND.

Authors:  Benjamin Buchfink; Chao Xie; Daniel H Huson
Journal:  Nat Methods       Date:  2014-11-17       Impact factor: 28.547

2.  Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire.

Authors:  Gustavo P R Azevedo; Hannah K Mattsson; Grasiele R Lopes; Livia Vidal; Mariana Campeão; Luciane A Chimetto Tonon; Gizele D Garcia; Diogo A Tschoeke; Bruno S Silva; Koko Otsuki; Bruno Gomez-Gil; Jean Swings; Fabiano L Thompson; Cristiane C Thompson
Journal:  Arch Microbiol       Date:  2020-08-25       Impact factor: 2.552

3.  Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.

Authors:  Jongsik Chun; Aharon Oren; Antonio Ventosa; Henrik Christensen; David Ruiz Arahal; Milton S da Costa; Alejandro P Rooney; Hana Yi; Xue-Wei Xu; Sofie De Meyer; Martha E Trujillo
Journal:  Int J Syst Evol Microbiol       Date:  2018-01       Impact factor: 2.747

4.  Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas.

Authors:  Silvia Beurmann; Blake Ushijima; Christina M Svoboda; Patrick Videau; Ashley M Smith; Stuart P Donachie; Greta S Aeby; Sean M Callahan
Journal:  Int J Syst Evol Microbiol       Date:  2017-08-18       Impact factor: 2.747

5.  Vaccination prevents Helicobacter pylori-induced alterations of the gastric flora in mice.

Authors:  Toni Aebischer; André Fischer; Anna Walduck; Cord Schlötelburg; Mirko Lindig; Sören Schreiber; Thomas F Meyer; Stefan Bereswill; Ulf B Göbel
Journal:  FEMS Immunol Med Microbiol       Date:  2006-03

6.  Epizoic communities of prokaryotes on healthy and diseased scleractinian corals in Lingayen Gulf, Philippines.

Authors:  Mark Arboleda; Wolfgang Reichardt
Journal:  Microb Ecol       Date:  2008-06-06       Impact factor: 4.552

7.  Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis.

Authors:  Y Ben-Haim; F L Thompson; C C Thompson; M C Cnockaert; B Hoste; J Swings; E Rosenberg
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

8.  Responses of Mytilus galloprovincialis to challenge with the emerging marine pathogen Vibrio coralliilyticus.

Authors:  Teresa Balbi; Manon Auguste; Katia Cortese; Michele Montagna; Alessio Borello; Carla Pruzzo; Luigi Vezzulli; Laura Canesi
Journal:  Fish Shellfish Immunol       Date:  2018-10-06       Impact factor: 4.581

9.  Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

Authors:  Francesco Asnicar; Andrew Maltez Thomas; Francesco Beghini; Claudia Mengoni; Serena Manara; Paolo Manghi; Qiyun Zhu; Mattia Bolzan; Fabio Cumbo; Uyen May; Jon G Sanders; Moreno Zolfo; Evguenia Kopylova; Edoardo Pasolli; Rob Knight; Siavash Mirarab; Curtis Huttenhower; Nicola Segata
Journal:  Nat Commun       Date:  2020-05-19       Impact factor: 14.919

10.  trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.

Authors:  Salvador Capella-Gutiérrez; José M Silla-Martínez; Toni Gabaldón
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

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