Literature DB >> 35903520

Roles of High-valent Hemes and pH Dependence in Halite Decomposition Catalyzed by Chlorite Dismutase from Dechloromonas aromatica.

Zachary Geeraerts1, Olivia R Stiller1, Gudrun S Lukat-Rodgers1, Kenton R Rodgers1.   

Abstract

The heme-based chlorite dismutases catalyze the unimolecular decomposition of chlorite (ClO2 -) to yield Cl- and O2. The work presented here shows that chlorite dismutase from Dechloromonas aromatica (DaCld) also catalyzes the decomposition of bromite (BrO2 -) with the evolution of O2 (k cat = (2.0±0.2)×102 s-1; k cat/K M = (1.2±0.2)×105 M-1 s-1 at pH 5.2). Stopped-flow studies of this BrO2 - decomposition as a function of pH show that 1) the two-electron oxidized heme, compound I (Cpd I), is the primary accumulating heme intermediate during O2 evolution in acidic solution, 2) Cpd I and its one-electron reduction product, compound II (Cpd II) are present in varying ratios at intermediate pHs, and 3) only Cpd II is observed at pH 9.0. The pH dependences of Cpd I and Cpd II populations both yield a pK a of 6.7±0.1 in good agreement with the pK a of DaCld activity with ClO2 -. The observation of a protein-based amino acid radical (AA•) whose appearance coincides with that of Cpd II supports the hypothesis that conversion of Cpd I to Cpd II occurs via proton-coupled electron transfer (PCET) from a heme-pocket amino acid to the oxidized porphyrinate of Cpd I to yield a dead-end decoupled state in which the holes decay at different rates. The site of the amino acid radical is tentatively assigned to Y118, which serves as a H-bond donor to propionate 6 (P6). The favoring of Cpd II:AA• accumulation in alkaline solution is consistent with the amino acid oxidation being rate limited by transfer of its proton to P6 having pK a 6.7. Examination of reaction mixtures comprising DaCld and ClO2 - by resonance Raman and electron paramagnetic resonance spectroscopy reveal formation of Cpd II and •ClO2, which forms in preference to the analogous to AA• in the BrO2 - reaction. Addition of ClO- to Cpd II did not yield O2. Together these results are consistent with heterolytic cleavage of the O-BrO- and O-ClO- bonds yielding Cpd I, which is the catalytically active intermediate. The long-lived Cpd II that forms subsequently, is inactive toward O2 production, and diminishes the amount of enzyme available to cycle through the active Cpd I intermediate.

Entities:  

Keywords:  chlorite dismutase; compound I; electron paramagnetic resonance; heme; oxygen evolution; protein radical; resonance Raman

Year:  2022        PMID: 35903520      PMCID: PMC9328492          DOI: 10.1021/acscatal.2c01428

Source DB:  PubMed          Journal:  ACS Catal            Impact factor:   13.700


  58 in total

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Journal:  Chemistry       Date:  2019-04-04       Impact factor: 5.236

2.  Bromite ion catalysis of the disproportionation of chlorine dioxide with nucleophile assistance of electron-transfer reactions between ClO(2) and BrO(2) in basic solution.

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3.  One-electron oxidation of a hydrogen-bonded phenol occurs by concerted proton-coupled electron transfer.

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4.  Mechanism of and exquisite selectivity for O-O bond formation by the heme-dependent chlorite dismutase.

Authors:  Amanda Q Lee; Bennett R Streit; Michael J Zdilla; Mahdi M Abu-Omar; Jennifer L DuBois
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-07       Impact factor: 11.205

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6.  Resonance Raman spectroscopic studies of hydroperoxo derivatives of cobalt-substituted myoglobin.

Authors:  Piotr J Mak; James R Kincaid
Journal:  J Inorg Biochem       Date:  2008-07-23       Impact factor: 4.155

7.  Unexpected diversity of chlorite dismutases: a catalytically efficient dimeric enzyme from Nitrobacter winogradskyi.

Authors:  Georg Mlynek; Björn Sjöblom; Julius Kostan; Stephanie Füreder; Frank Maixner; Kira Gysel; Paul Georg Furtmüller; Christian Obinger; Michael Wagner; Holger Daims; Kristina Djinović-Carugo
Journal:  J Bacteriol       Date:  2011-03-25       Impact factor: 3.476

8.  A dimeric chlorite dismutase exhibits O2-generating activity and acts as a chlorite antioxidant in Klebsiella pneumoniae MGH 78578.

Authors:  Arianna I Celis; Zachary Geeraerts; David Ngmenterebo; Melodie M Machovina; Richard C Kurker; Kumar Rajakumar; Anabella Ivancich; Kenton R Rodgers; Gudrun S Lukat-Rodgers; Jennifer L DuBois
Journal:  Biochemistry       Date:  2014-12-19       Impact factor: 3.162

9.  Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.

Authors:  Irene Schaffner; Georg Mlynek; Nicola Flego; Dominic Pühringer; Julian Libiseller-Egger; Leighton Coates; Stefan Hofbauer; Marzia Bellei; Paul G Furtmüller; Gianantonio Battistuzzi; Giulietta Smulevich; Kristina Djinović-Carugo; Christian Obinger
Journal:  ACS Catal       Date:  2017-10-13       Impact factor: 13.084

10.  Structure and reactivity of chlorite dismutase nitrosyls.

Authors:  Zachary Geeraerts; Alisa K Heskin; Jennifer DuBois; Kenton R Rodgers; Gudrun S Lukat-Rodgers
Journal:  J Inorg Biochem       Date:  2020-07-26       Impact factor: 4.155

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