| Literature DB >> 35897993 |
Patiyus Agustiansyah1,2, Siti Nurmaini3, Laila Nuranna4, Irfannuddin Irfannuddin5, Rizal Sanif5, Legiran Legiran5, Muhammad Naufal Rachmatullah3, Gavira Olipa Florina3, Ade Iriani Sapitri3, Annisa Darmawahyuni3.
Abstract
Precancerous screening using visual inspection with acetic acid (VIA) is suggested by the World Health Organization (WHO) for low-middle-income countries (LMICs). However, because of the limited number of gynecological oncologist clinicians in LMICs, VIA screening is primarily performed by general clinicians, nurses, or midwives (called medical workers). However, not being able to recognize the significant pathophysiology of human papilloma virus (HPV) infection in terms of the columnar epithelial-cell, squamous epithelial-cell, and white-spot regions with abnormal blood vessels may be further aggravated by VIA screening, which achieves a wide range of sensitivity (49-98%) and specificity (75-91%); this might lead to a false result and high interobserver variances. Hence, the automated detection of the columnar area (CA), subepithelial region of the squamocolumnar junction (SCJ), and acetowhite (AW) lesions is needed to support an accurate diagnosis. This study proposes a mask-RCNN architecture to simultaneously segment, classify, and detect CA and AW lesions. We conducted several experiments using 262 images of VIA+ cervicograms, and 222 images of VIA-cervicograms. The proposed model provided a satisfactory intersection over union performance for the CA of about 63.60%, and AW lesions of about 73.98%. The dice similarity coefficient performance was about 75.67% for the CA and about 80.49% for the AW lesion. It also performed well in cervical-cancer precursor-lesion detection, with a mean average precision of about 86.90% for the CA and of about 100% for the AW lesion, while also achieving 100% sensitivity and 92% specificity. Our proposed model with the instance segmentation approach can segment, detect, and classify cervical-cancer precursor lesions with satisfying performance only from a VIA cervicogram.Entities:
Keywords: acetowhite lesions; columnar area; instance segmentation; squamocolumnar junction; visual inspection of acetic acid
Mesh:
Substances:
Year: 2022 PMID: 35897993 PMCID: PMC9332449 DOI: 10.3390/s22155489
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.847
Figure 1The proposed methodology of instance segmentation for automate screening of VIA cervicograms based on cervical anatomy with CA and AW lesions.
Figure 2Cervicogram with adequate anatomy landmark. (a) Normal condition with the CA, SCJ, and TZ; (b) SC junction cells to immature metaplasia; (c) abnormal condition with AW lesion intersected with the SCJ.
Data distribution for the learning process.
| Cervicogram | Training | Validation | Testing | Total |
|---|---|---|---|---|
| Normal | 187 | 15 | 24 | 226 |
| Abnormal | 206 | 26 | 31 | 263 |
Figure 3Sample of annotated cervicograms by gynecological oncologist clinicians for standard cervicogram view in (a) normal with a red line as the SCJ and red area as the CA; (b) abnormal with a green line as the AW lesion and red line as the SCJ.
Figure 4Sample of annotated cervicograms by gynecological oncologists for AW lesion detection (precursor cancer lesion) and normal cervicograms. In the annotation, the region with the red line is the CA, and with the green line is the AW lesion; (a) raw data; (b) annotation label, and (c) squamocolumnar junction (SCJ) forms.
Figure 5RPNs with the ResNet 50 backbone and FCN architecture for AW lesion detection.
Figure 6An example of a feature map extracted from the ResNet50 backbone in the RPN.
Mask-RCNN performance with different learning rates.
| Learning Rate | IoU (%) | DSC (%) | mAP (%) | |||
|---|---|---|---|---|---|---|
| CA | AW Lesion | CA | AW Lesion | CA | AW Lesion | |
| 0.001 | 65.65 | 57.28 | 73.19 | 76.94 | 84.17 | 99.83 |
| 0.0001 | 63.61 | 72.43 | 72.55 | 88.81 | 86.90 | 100 |
| 0.00001 | 37.98 | 27.81 | 51.85 | 53.37 | 75.42 | 95.60 |
Mask-RCNN performance with three backbone architectures.
| Architecture | IoU (%) | DSC (%) | mAP (%) | |||
|---|---|---|---|---|---|---|
| CA Region | AW Lesion | CA Region | AW Lesion | CA Region | AW Lesion | |
| ResNet50 | 63.61 | 72.43 | 72.55 | 88.81 | 86.90 | 100 |
| ResNet101 | 63.73 | 72.73 | 73.22 | 86.73 | 83.75 | 99.85 |
| MobileNetV1 | 62.38 | 71.09 | 66.87 | 85.06 | 70.59 | 72.09 |
Figure 7Training and validation loss from the learning process with the ResNet50 backbone.
Mask-RCNN classification performance with three backbone architectures.
| Architecture | Performance (%) | ||||
|---|---|---|---|---|---|
| Accuracy | Sensitivity | Specificity | Precision | F1 Score | |
| ResNet50 | 96.29 | 100 | 92 | 93.54 | 96.67 |
| ResNet101 | 89.10 | 100 | 80 | 80.64 | 89.29 |
| MobileNetV1 | 56.36 | 100 | 50 | 22.58 | 36.84 |
Figure 8Classification performance with confusion matrix and ROC curve for three backbones.
Figure 9The result of mask-RCNN to identify CA and AW lesions. (left to right) Raw image, annotation image (red line for CA and green line for AW lesions in the ground truth), and prediction of CA and AW lesions (red for CA, and green for AW lesions). (a–c) Abnormal cervicograms; (d–f) normal cervicograms.
Benchmarking results with the existing research on cervical-cancer precursor lesions.
| Methods | Learning Process | IoU | Sensitivity | Specificity | Accuracy | Confidence | Inspection |
|---|---|---|---|---|---|---|---|
| SVM [ | Classification | - | 0.81 | 0.79 | 0.80 | - | Acetic acid and Lugol’s iodine |
| Faster-RCNN [ | Classification and detection | 0.2 | 0.82 | 0.90 | 0.86 | 0.80 | Acetic acid and Lugol’s iodine |
| 0.3 | 0.63 | 0.94 | 0.78 | 0.80 | |||
| 0.4 | 0.40 | 0.99 | 0.69 | 0.80 | |||
| 0.4 | 0.55 | 0.67 | 0.61 | 0.80 | Acetic acid | ||
| 0.4 | 0.49 | 0.57 | 0.53 | 080 | Lugol’s iodine | ||
| K-means clustering and CNNs classifier [ | Classification | - | 0.84 | 0.90 | 0.86 | - | Acetic acid |
| CNN with ResNet 50 [ | Classification | - | 0.89 | - | 0.91 | - | Acetic acid |
| CNN with ResNet 50 [ | Classification | - | 0.85 | 82.62 | 0.84 | - | Acetic acid and Lugol’s iodine |
| Mask-RCNN with ResNet50 (our model) | Segmentation, classification, and detection | 0.4 | 1 | 0.92 | 0.96 | 0.97 | Acetic acid |
| 0.5 | 1 | 0.92 | 0.96 | 0.97 | |||
| 0.6 | 1 | 0.77 | 0.87 | 0.98 | |||
| 0.7 | 1 | 0.50 | 0.60 | 0.98 |