| Literature DB >> 35894048 |
Patrick Dawson1,2, Johanna S Salzer1, Caroline A Schrodt1,2, Karl Feldmann3, Cari B Kolton1, Jay E Gee1, Chung K Marston1, Christopher A Gulvik1, Mindy G Elrod1, Aaron Villarma1, Rita M Traxler1, María E Negrón1, Kate A Hendricks1, Heather Moulton-Meissner4, Laura J Rose4, Paul Byers5, Kathryn Taylor5, Daphne Ware6, Gary A Balsamo7, Theresa Sokol7, Bret Barrett8, Erica Payne8, Saad Zaheer9, Ga On Jung9, Stephen Long10, Ricardo Quijano10, Lindsey LeBouf10, Briana O'Sullivan11, Erin Swaney11, James M Antonini3, Marie A de Perio3, Zachary Weiner1, William A Bower1, Alex R Hoffmaster1.
Abstract
Abstract Bacillus cereus group bacteria containing the anthrax toxin genes can cause fatal anthrax pneumonia in welders. Two welder's anthrax cases identified in 2020 were investigated to determine the source of each patient's exposure. Environmental sampling was performed at locations where each patient had recent exposure to soil and dust. Samples were tested for the anthrax toxin genes by real-time PCR, and culture was performed on positive samples to identify whether any environmental isolates matched the patient's clinical isolate. A total of 185 environmental samples were collected in investigation A for patient A and 108 samples in investigation B for patient B. All samples from investigation B were real-time PCR-negative, but 14 (8%) samples from investigation A were positive, including 10 from patient A's worksite and 4 from his work-related clothing and gear. An isolate genetically matching the one recovered from patient A was successfully cultured from a worksite soil sample. All welder's anthrax cases should be investigated to determine the source of exposure, which may be linked to their worksite. Welding and metalworking employers should consider conducting a workplace hazard assessment and implementing controls to reduce the risk of occupationally associated illnesses including welder's anthrax.Entities:
Keywords: Bacillus cereus; Bacillus tropicus; anthrax; anthrax toxin; welding
Year: 2022 PMID: 35894048 PMCID: PMC9394366 DOI: 10.3390/pathogens11080825
Source DB: PubMed Journal: Pathogens ISSN: 2076-0817
Figure 1Satellite imagery of patient A’s worksite and diagram of worksite features, environmental sampling locations, and locations of samples that were real-time PCR-positive for B. cereus group bacteria containing anthrax toxin genes. Abbreviations: m = meter; MF = macrofoam; SS = sponge-stick. (Panel A): Satellite image of patient A’s worksite (Google Maps, Mountain View, CA, USA; 2020). (Panel B): Diagram of patient A’s worksite features and their approximate locations. (Panel C): Diagram of environmental sampling locations and sample type collected at patient A’s worksite. Note: All samples indicated on the equipment trailers were collected inside the trailers. (Panel D): Diagram of approximate locations of samples that were real-time PCR-positive for B. cereus group bacteria containing anthrax toxin genes at patient A’s worksite.
Figure 2Timeline of patient A’s symptom onset, hospitalization, and significant exposures to soil and dust in the 30 days preceding symptom onset. Note: The patient worked at the welding worksite Monday through Friday each week from 9 March to 22 April 2020.
Laboratory testing results for B. cereus group bacteria containing anthrax toxin genes from 185 environmental samples collected during the investigation of patient A’s source of exposure.
| Number of Samples | Sampling Site * | Sampling Location | Sample Type † | Real-Time PCR Result § | Culture Result | WGS Result |
|---|---|---|---|---|---|---|
| 1 | Worksite | Front of oil tank access door | Soil | Positive | Positive |
|
| 3 | Worksite | Front of oil tank access door | Soil | Positive | Negative | N/A |
| 4 | Worksite | Worksite grounds | Gravel | Positive | Negative | N/A |
| 2 | Worksite | Grinder tools and cabinets | SS swab in NB | Positive | Negative | N/A |
| Total 10 real-time PCR-positive samples from worksite (8%) | ||||||
| 3 | Residence | Work boots | MF swab in PBS | Positive | Negative | N/A |
| 1 | Residence | Work lunch cooler | SS swab in NB | Positive | Negative | N/A |
| Total 4 real-time PCR-positive samples from work-related clothing and gear at residence (22%) | ||||||
| 1 | Worksite | Beneath oil tank ladder | Soil | Inconclusive | Negative | N/A |
| 1 | Worksite | Worksite grounds | Gravel | Inconclusive | Negative | N/A |
| 1 | Worksite | Rubber mats and wood pallets | SS swab in NB | Inconclusive | Negative | N/A |
| 1 | Worksite | Welding rods and container | SS swab in NB | Inconclusive | Negative | N/A |
| Total 4 real-time PCR-inconclusive samples from worksite (3%) | ||||||
| 55 | Worksite | Various locations | Soil | Negative | Not done | N/A |
| 11 | Worksite | Various locations | Gravel | Negative | Not done | N/A |
| 41 | Worksite | Various locations | SS swab in NB | Negative | Not done | N/A |
| 11 | Worksite | Various locations | MF swab in PBS | Negative | Not done | N/A |
| Total 118 real-time PCR-negative samples from worksite (89%) | ||||||
| 2 | Residence | Work-related clothing/gear | Filter cartridge | Negative | Not done | N/A |
| 4 | Residence | Work-related clothing/gear | SS swab in NB | Negative | Not done | N/A |
| 8 | Residence | Work-related clothing/gear | MF swab in PBS | Negative | Not done | N/A |
| Total 14 real-time PCR-negative samples from work-related clothing and gear at residence (78%) | ||||||
| 18 | Residence | Yard—various locations | Soil | Negative | Not done | N/A |
| 5 | Residence | Yard—various locations | Gravel | Negative | Not done | N/A |
| 12 | Residence | Yard—various locations | SS swab in NB | Negative | Not done | N/A |
| Total 35 real-time PCR-negative samples from yard at residence (100%) | ||||||
Abbreviations: MF = macrofoam; N/A = not applicable; NB = neutralizing buffer; PBS = phosphate-buffered saline; SS = sponge-stick; WGS = whole genome sequencing. Shaded rows indicate subtotals of real-time PCR results by sampling location and percentage by sampling site. * The two sampling sites were patient A’s worksite in Louisiana (n = 132 samples) and residence in Mississippi (n = 18 samples from work-related clothing and gear; n = 35 samples from the yard). † Surface and subsurface soil and gravel samples were collected using sterile plastic spatulas and deposited into 50 mL conical polycarbonate screw-cap tubes. Soil and gravel samples were collected within a 2.5 cm × 2.5 cm square at a depth of up to 3 cm. Any reused plastic spatulas were cleaned with a 10% bleach solution between samples (which was preferred over pH-adjusted bleach for use in the field and deemed adequate for disinfection of environmental surfaces outside of a laboratory setting). Sterile sponge-stick swabs were soaked in 10 mL neutralizing buffer prior to swabbing and deposited into sterile Whirl-Pak® plastic bags. Sponge-stick swabs were swabbed within 25 cm × 25 cm squares in overlapping “S”-patterns using all sides and edges of the sponge [20]. Sterile macrofoam swabs were soaked in neutralizing buffer prior to swabbing and deposited into sterile 15 mL conical polycarbonate screw-cap tubes. Macrofoam swabs were swabbed within 10 cm × 10 cm squares in overlapping “S”-patterns using all sides and edges of the sponge [20]. § A sample was considered real-time PCR-positive if two extractions yielded a positive result and was considered inconclusive if only one of two extractions yielded a positive result. B. tropicus is a member of the B. cereus group [12]. ¶ B. tropicus is a member of the B. cereus group.
Single nucleotide polymorphism (SNP) distances between patient A’s clinical isolate, the environmental isolate from patient A’s worksite, and other isolates of B. cereus group bacteria containing anthrax toxin genes of multilocus sequence type 78 (ST-78).
| LA2020 | LA2020b | G9241 1 | 03BB87 2 | LA2007 3 | BcFL2013 4 | BC-AK 5 | |
|---|---|---|---|---|---|---|---|
|
| 0 | ||||||
|
| 2 | 0 | |||||
|
| 39 | 39 | 0 | ||||
|
| 120 | 120 | 147 | 0 | |||
|
| 216 | 218 | 213 | 319 | 0 | ||
|
| 244 | 246 | 241 | 347 | 62 | 0 | |
|
| 1005 | 1005 | 1000 | 1113 | 1139 | 1165 | 0 |
Row and column headers in bold indicate various isolates of B. cereus group bacteria containing anthrax toxin genes of multilocus ST-78 [7,8,9,11]. B. cereus strain BC-AK, https://www.ncbi.nlm.nih.gov/biosample/SAMN06448760 (accessed on 26 May 2022).