| Literature DB >> 35887741 |
Pengfei Fu1, Yi Zhang2, Jun Zhang1, Jin Hu1, Yirui Sun1,3,4.
Abstract
Objective: To generate an optimal prediction model along with identifying major contributors to intracranial infection among patients under external ventricular drainage and neurological intensive care.Entities:
Keywords: external ventricular drainage; intracranial infection; lasso regression; logistic regression; machine learning; nomogram
Year: 2022 PMID: 35887741 PMCID: PMC9317602 DOI: 10.3390/jcm11143973
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.964
Figure 1Flow chart for identifying eligible patients. Abbreviations: TBI, traumatic brain injury; ICH, intracranial hemorrhage; CT, computerized tomography; EVD, external ventricular drainage.
Demographic and clinical features of recruited patients *.
| Variables | With EVD-Associated Intracranial Infections ( | Without EVD-Associated Intracranial Infections ( |
|
|---|---|---|---|
| Clinical characteristics | |||
| Gender (Male) | 77 (53.85%) | 262 (58.09%) | 0.36 |
| Age (years) | 54.08 (15.16) | 55.28 (14.38) | 0.39 |
| BMI | 23.22 (3.85) | 23.48 (3.64) | 0.48 |
| History of diabetes | 107 (74.83%) | 337 (74.72%) | <0.01 |
| ASA grades | 3.04 (0.94) | 2.25 (0.84) | <0.01 |
| BP on admission (mmHg) | 140.96 (12.30) | 142.12 (12.55) | 0.34 |
| GCS 3–8 ( | 21 (14.69%) | 70 (15.52%) | 0.81 |
| GCS 9–12 ( | 28 (19.58%) | 87 (19.29%) | 0.94 |
| GCS 13–15 ( | 94 (65.73%) | 294 (65.19%) | 0.91 |
| Preoperative intubation ( | 32 (22.38%) | 84 (18.63%) | 0.32 |
| Lopt (minutes) | 146.3 (92.44) | 126.44 (79.85) | 0.02 |
| Cases underwent operations in addition to EVD ( | 62 (43.36%) | 175 (38.80%) | 0.33 |
| Diagnosis and complications | |||
| Hydrocephalus ( | 17 (11.89%) | 56 (12.42%) | 0.87 |
| Spontaneous ICH ( | 95 (66.43%) | 221 (49.00%) | <0.01 |
| Traumatic brain injury ( | 62 (43.36%) | 143 (31.71%) | 0.01 |
| Skull fracture ( | 41 (28.67%) | 136 (30.16%) | <0.01 |
| tSAH ( | 69 (48.25%) | 146 (32.37%) | <0.01 |
| CSF leakage due to trauma ( | 9 (6.29%) | 27 (5.99%) | <0.01 |
| Nonintracranial infections ( | 12 (8.39%) | 28 (6.21%) | 0.36 |
| First laboratory tests | |||
| RBC (1012/L) | 4.49 (0.89) | 4.50 (0.83) | 0.88 |
| HB (g/L) | 75.28 (61.83) | 117.85 (32.26) | <0.01 |
| WBC (109/L) | 13.64 (4.24) | 12.88 (5.15) | 0.08 |
| NEUT (%) | 86.01 (6.21) | 83.83 (10.58) | <0.01 |
| PLT (109/L) | 200.86 (65.21) | 202.49 (68.66) | 0.8 |
| TBIL (μmol/L) | 12.28 (6.92) | 11.39 (6.84) | 0.18 |
| DBIL(μml/L) | 5.15 (2.91) | 4.94 (2.83) | 0.44 |
| ALT (U/L) | 43.17 (38.24) | 33.12 (23.60) | <0.01 |
| AST (U/L) | 43.23 (27.85) | 38.32 (29.57) | 0.15 |
| LDH (U/L) | 206.94 (69.11) | 205.53 (64.56) | 0.82 |
| HDL (mmol/L) | 1.93 (0.59) | 1.96 (0.62) | 0.62 |
| LDL (mmol/L) | 2.93 (1.15) | 2.97 (1.15) | 0.77 |
| Ch (μml/L) | 5.07 (1.18) | 5.03 (1.15) | 0.75 |
| Ab (g/L) | 33.27 (7.22) | 43.74 (4.62) | <0.01 |
| GLB (g/L) | 30.71 (6.62) | 32.02 (7.61) | 0.01 |
| BUN (mmol/L) | 6.09 (1.77) | 6.05 (1.76) | 0.79 |
| UA (mmol/L) | 261.83 (101.63) | 250.59 (94.69) | 0.23 |
| SCR (μmol/L) | 5.87 (1.21) | 6.03 (1.18) | 0.16 |
| Postoperative EVD monitoring | |||
| Length of EVD (days) | 9.15 (4.52) | 6.85 (3.48) | 0.045 |
| Number of CSF sampling (per week) | 3.07 (1.41) | 3.00 (1.41) | 0.62 |
| Leakage from EVD site ( | 20 (13.99%) | 23 (5.10%) | <0.01 |
| Outcomes | |||
| ICU length of stays (days) | 14.29 (6.91) | 5.93 (2.96) | <0.01 |
| Hospital stays (days) | 24.49 (3.62) | 11.25 (3.75) | <0.01 |
| In-hospital mortality ( | 47 (32.87%) | 26 (5.76%) | <0.01 |
* Continuous data are shown as mean (standard deviation). Abbreviations: EVD, external ventricular drainage; CSF, cerebropinal fluid; ICH, intracranial hemorrhage; ASA, American Society of Anesthesiologists; Lopt, length of operation time; tSAH, traumatic subarachnoid hemorrhage; RBC, red blood cell; HB, hemoglobin; WBC, white blood cell; NEUT, neutrophil ration; PLT, platelet; TBIL, indirect bilirubin; DBIL, direct bilirubin; ALT, glutamic pyruvic transaminase; AST, glutamic oxalacetic transaminase; LDH, lactate dehydrogenase; HDL, high-density lipoprotein; LDL, low-density lipoprotein; Ch, cholinesterase; Ab, albumin; GLB, globulin; BUN, urea nitrogen; UA, uric acid; SCR, creatinine; BP, blood pressure; GCS, Glasgow coma scale; BMI, body mass index; ICU, intensive care unit.
Figure 2LASSO regression for feature selection. Different color lines represent different variables.
Top weighted features for predicting EVD-associated intracranial infections.
| Models | Features | Weight |
|---|---|---|
| Logistic Regression | ASA grades | 0.37 |
| HB | 0.24 | |
| History of diabetes | 0.19 | |
| tSAH | 0.092 | |
| Lopt | 0.087 | |
| Ab | 0.068 | |
| SVM | HB | 0.31 |
| ASA grades | 0.29 | |
| Ab | 0.18 | |
| Lopt | 0.16 | |
| History of diabetes | 0.13 | |
| Length of EVD | 0.076 | |
| KNN | ASA grades | 0.37 |
| HB | 0.17 | |
| ALT | 0.16 | |
| Lopt | 0.14 | |
| Ab | 0.095 | |
| Leakage from EVD site | 0.075 |
Abbreviations: ASA, American Society of Anesthesiologists; SVM, Support Vector Machine; KNN, K-nearest neighbor; EVD, external ventricular drainage; Lopt, length of operation time; HB, hemoglobin; tSAH, traumatic subarachnoid hemorrhage; ALT, glutamic pyruvic transaminase; Ab, albumin.
Multimodel classification—training cohort *.
| Classification Model | AUC | Cut-Off | Accuracy | Sensitivity | Specificity | Positive Predictive Value | Negative Predictive Value | F1 Score |
|---|---|---|---|---|---|---|---|---|
| Logistic regression | 0.846 (0.006) | 0.305 (0.016) | 0.870 (0.004) | 0.761 (0.010) | 0.970 (0.005) | 0.715 (0.011) | 0.921 (0.003) | 0.737 (0.008) |
| SVM | 0.730 (0.008) | 0.191 (0.100) | 0.792 (0.029) | 0.646 (0.059) | 0.845 (0.054) | 0.575 (0.097) | 0.879 (0.009) | 0.599 (0.018) |
| KNN | 0.845 (0.003) | 0.400 (0.001) | 0.887 (0.005) | 0.931 (0.014) | 0.817 (0.012) | 0.828 (0.021) | 0.901 (0.007) | 0.876 (0.012) |
* All values are shown as mean (standard deviation). Abbreviations: AUC, Aera Under Curve; SVM, support vector machine; KNN, k-nearest neighbor.
Figure 3Model performance using the training dataset. (A) The ROC curve of the logistic regression, SVM, and KNN models. (B) The DCA of the logistic regression, SVM, and KNN models. The thick solid line signifies the assumption that no intracranial infection occurred in any patient on the y-axis.
Multimodel classification—validation cohort *.
| Classification Model | AUC | Cut-Off | Accuracy | Sensitivity | Specificity | Positive Predictive Value | Negative Predictive Value | F1 Score |
|---|---|---|---|---|---|---|---|---|
| Logistic regression | 0.847 (0.097) | 0.305 (0.016) | 0.869 (0.050) | 0.787 (0.145) | 0.923 (0.058) | 0.714 (0.094) | 0.924 (0.048) | 0.743 (0.101) |
| SVM | 0.677 (0.111) | 0.191 (0.100) | 0.758 (0.069) | 0.698 (0.174) | 0.875 (0.135) | 0.521 (0.140) | 0.856 (0.050) | 0.585 (0.122) |
| KNN | 0.844 (0.072) | 0.400 (0.000) | 0.829 (0.053) | 0.833 (0.136) | 0.747 (0.156) | 0.730 (0.170) | 0.859 (0.051) | 0.757 (0.100) |
* All values are shown as mean (standard deviation). Abbreviations: AUC, Aera Under Curve; SVM, support vector machine; KNN, k-nearest neighbor.
Figure 4Model performance using the validation dataset. (A) The ROC curve of the logistic regression, SVM, and KNN models. (B) Calibration curves of the EVD-associated infection prediction. The y-axis meant the diagnosed infection. The x-axis meant the predicted risk of infection. The diagonal dotted line meant a perfect prediction by an ideal model. The solid line represented the performance of logistic regression, SVM, and KNN models, which indicated that a closer fit to the diagonal dotted line represented a better prediction.
Figure 5Development of the prediction nomogram. The EVD-associated infection risk nomogram was developed with the predictors including HB, ASA grades, Lopt, Ab, history of diabetes, and a diagnosis of tSAH.