| Literature DB >> 35885543 |
Aleksandra E Mrozikiewicz1, Grażyna Kurzawińska2,3, Agata Goździewicz-Szpera2, Michał Potograbski2, Marcin Ożarowski4, Tomasz M Karpiński5, Magdalena Barlik6, Piotr Jędrzejczak7, Krzysztof Drews2,3.
Abstract
INTRODUCTION: Some evidence indicates that the improper trophoblast invasion of maternal spiral arteries could be caused by an imbalance between matrix metalloproteinases (MMPs) and tissue inhibitors of metalloproteinases (TIMPs), leading to preeclampsia (PE) development. This study aimed to assess the potential role of MMP1, MMP9, TIMP1 and TIMP2 gene polymorphisms in the pathogenesis of PE.Entities:
Keywords: TIMP1 rs4898 gene polymorphism; metalloproteinases; preeclampsia
Year: 2022 PMID: 35885543 PMCID: PMC9321342 DOI: 10.3390/diagnostics12071637
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Characteristics of selected variants in genes MMP1, MMP9, TIMP1 and TIMP2.
| Gene |
|
|
|
| ||
|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
| chr11:102799765-102799766 | chr20:46011586 | chr20:46014472 | chrX:47585586 | chr17:78870935 | chr17:78871103 |
|
| −1607 1G/2G | 836A > G | 2003G > A | 372T > C | 303C > T | — |
| NG_011740.2: | NG_011468.1: | NG_011468.1: | NG_012533.1: | NC_000017.11: | NC_000017.11: | |
|
| delC | A > G | G > A | T > C | C > T | G > T |
|
| none | Q279R | R668Q | F124= | S101= | none |
|
| 2 KB Upstream Variant | Exon 6 | Exon 12 | Exon 5 | Exon 3 | Intron 2 |
GRCh38 is the Genome Reference Consortium Human genome build 38 patch release 12. * Human Genome Variation Society (HGVS).
Primer sequences, annealing temperatures, and restriction enzymes of the polymorphisms.
| Gene | Primer Sequence | Amplicon Size | Restriction Enzyme | RFLP Product Size |
|---|---|---|---|---|
|
| 5′-TGACTTTTAAAACATAGTCTATGTTCA-3′ | 269 bp | AluI | 1G 241, 28 bz |
|
| 5′-GAGAGATGGGATGAACTG-3′ | 439 bp | MspI | A 252, 187 bz |
|
| 5′-ACACGCACGACGTCTTCCAGTATC-3′ | 138 bp | TaqI | G 115, 23 bz |
|
| 5′-GCACATCACTACCTGCAGT | 175 bz | BauI (BssSI) | T 175 bz |
|
| 5′-CCAGGAAATTGGCAGGTAGT-3′ | 369 bz | BsrI | C 369 bz |
|
| 5′-CCTTTGAACATCTGGAAAGACAA-3′ | 160 bz | AluI | T 160 pz |
Selected clinical characteristics of the PE and healthy women in the association study.
| Variables | PE ( | Controls ( |
| EOPE ( | LOPE ( |
|
|---|---|---|---|---|---|---|
| Maternal age (years) | 30.32 ± 5.32 | 31.06 ± 3.89 | 0.2019 | 30.11 ± 5.22 | 30.53 ± 5.45 | 0.6782 |
| Gestational age (weeks) | 33.69 ± 3.58 | 38.97 ± 1.09 | <0.001 | 30.56 ± 2.10 | 36.61 ± 1.71 | <0.001 |
| Systolic blood pressure (mmHg) | 171.71 ± 18.63 | 104.56 ± 10.85 | <0.001 | 175.64 ± 19.51 | 168.05 ± 17.15 | 0.0335 |
| Diastolic blood pressure (mmHg) | 106.80 ± 12.81 | 66.01 ± 7.77 | <0.001 | 107.34 ± 13.53 | 106.20 ± 12.18 | 0.6157 |
| Pre-pregnancy BMI (kg/m2) | 25.17 ± 5.83 | 21.00 ± 2.50 | <0.001 | 24.99 ± 4.67 | 25.34 ± 6.74 | 0.7534 |
| Post-pregnancy BMI (kg/m2) | 30.48 ± 5.27 | 26.17 ± 2.94 | <0.001 | 30.16 ± 4.12 | 30.78 ± 6.16 | 0.5225 |
| Caesarean section, N (%) | 104 (90.43) | 65 (33.68) | <0.001 * | 54 (98.18) | 50 (83.33) | 0.009 # |
| Primipara, N (%) | 69 (60.00) | 22 (11.40) | <0.001 * | 33 (60.00) | 36 (60.00) | 1.000 * |
| Infant sex—girl N (%) | 59 (51.30) | 81 (41.97) | 0.1117 * | 28 (50.91) | 31 (51.67) | 0.9203 * |
| Infant birthweight (g) | 1892.97 ± 857.63 | 3467.46 ± 409.17 | <0.001 | 1323.15 ± 426.30 | 2442.81 ± 809.98 | <0.001 |
| Apgar score at 1 min | 7.35 ± 2.70 | 9.87 ± 0.47 | <0.001 | 6.11 ± 2.62 | 8.54 ± 2.21 | <0.001 |
| Apgar score at 5 min | 8.58 ± 1.54 | 9.98 ± 0.13 | <0.001 | 7.85 ± 1.63 | 9.29 ± 1.06 | <0.001 |
| Placenta weight (g) | 423.53 ± 162.68 | 611.30 ± 113.43 | <0.001 | 325.64 ± 100.41 | 517.65 ± 155.88 | <0.001 |
Values are presented as mean ± SD or n (%), p value—Student’s t-test, # Fisher test, * Pearson’s χ2, BMI = body mass index.
Laboratory findings of patients according to onset of preeclampsia.
| Variables | All PE Women ( | EOPE ( | LOPE ( | |
|---|---|---|---|---|
| Urea (mg/dL) | 30.23 ± 13.62 | 32.11 ± 13.58 | 28.45 ± 13.52 | 0.1577 |
| Uremic acid (mg/dL) | 6.49 ± 1.33 | 6.74 ± 1.50 | 6.26 ± 1.10 | 0.0593 |
| Total protein (g/dL) | 5.67 ± 0.71 | 5.47 ± 0.57 | 5.85 ± 0.78 | 0.0049 |
| Creatinine (mg/dL) | 0.75 ± 0.21 | 0.81 ± 0.26 | 0.69 ± 0.11 | 0.0919 |
| Proteinuria (mg/dL) | 279.79 ± 193.69 | 369.96 ± 181.79 | 194.37 ± 164.78 | <0.001 |
| ALT, U/L | 35.33 ± 43.42 | 50.69 ± 56.75 | 20.99 ± 17.98 | 0.0803 |
| AST, IU/L | 36.07 ± 38.62 | 48.46 ± 50.81 | 24.51 ± 17.01 | 0.1131 |
| Proteinuria, g/24 h | 3.72 ± 3.27 | 4.86 ± 2.77 | 2.49 ± 3.42 | 0.0499 |
ALT = alanine transaminase, AST = aspartate transaminase, p value—Student’s t-test.
Genotype frequencies of the MMP1, MMP9, TIMP1 and TIMP2 polymorphisms and their association with risk of PE.
| SNP | Alleles | HWE | OR (95%CI) |
| Allele Frequency in European Population * | |
|---|---|---|---|---|---|---|
|
|
|
| ||||
|
| 113 (0.491) | 117 (0.508) | 0.960 | 1.274 (0.919–1.768) | 0.145 | |
|
| 213 (0.551) | 173 (0.448) | 0.997 | |||
|
|
|
| ||||
|
| 143 (0.621) | 87 (0.378) | 0.622 | 1.157 (0.824–1.624) | 0.398 | |
|
| 253 (0.655) | 133 (0.344) | 0.616 | |||
|
|
|
| ||||
|
| 289 (0.821) | 41 (0.178) | 0.103 | 1.305 (0.839–2.031) | 0.236 | |
|
| 331 (0.857) | 55 (0.142) | 0.471 | |||
|
|
|
| ||||
|
| 108 (0.469) | 122 (0.531) | 0.971 | 1.129 (0.814–1.566) | 0.464 | |
|
| 193 (0.500) | 193 (0.500) | 0.319 | |||
|
|
|
| ||||
|
| 196 (0.852) | 34 (0.147) | 0.545 | 0.980 (0.62–1.552) | 0.999 | |
|
| 328 (0.849) | 58 (0.151) | 0.651 | |||
|
|
|
| ||||
|
| 181 (0.786) | 49 (0.213) | 0.992 | 1.222 (0.812–1.838) | 0.343 | |
|
| 316 (0.818) | 70 (0.181) | 0.523 | |||
Pearson’s p, * 1000 Genomes Project phase3 release V3+.
Genotype frequencies of the MMP1, MMP9, TIMP1 and TIMP2 polymorphisms and their association with risk of PE.
| SNP | Genotypes | PE ( | Control ( | OR (95%CI) |
|
* |
|---|---|---|---|---|---|---|
|
| 27 (0.235) | 59 (0.305) | 1.00 | 0.3332 | 0.3455 | |
| 59 (0.513) | 95 (0.492) | 0.74 (0.42–1.29) | ||||
| 29 (0.252) | 39 (0.202) | 0.62 (0.32–1.19) | ||||
| Dominant | 88 (0.765) | 134 (0.694) | 0.70 (0.41–1.18) | 0.1762 | 0.1548 | |
| Recessive | 86 (0.748) | 154 (0.798) | 0.75 (0.43–1.30) | 0.3080 | 0.4482 | |
|
|
| 42 (0.365) | 86 (0.446) | 1.00 | 0.2731 | 0.7135 |
|
| 59 (0.513) | 81 (0.420) | 0.67 (0.41–1.10) | |||
|
| 14 (0.122) | 26 (0.134) | 0.91 (0.43–1.91) | |||
| Dominant | 73 (0.635) | 107 (0.554) | 0.72 (0.45–1.15) | 0.1649 | 0.4127 | |
| Recessive | 101 (0.878) | 167 (0.865) | 1.12 (0.56–2.25) | 0.7422 | 0.8464 | |
|
|
| 81 (0.704) | 144 (0.746) | 1.00 | 0.4329 | 0.2268 |
|
| 27 (0.235) | 43 (0.223) | 0.90 (0.52–1.56) | |||
|
| 7 (0.061) | 6 (0.031) | 0.48 (0.16–1.48) | |||
| Dominant | 34 (0.296) | 49 (0.254) | 0.81 (0.48–1.36) | 0.4260 | 0.1754 | |
| Recessive | 108 (0.939) | 187 (0.969) | 0.50 (0.16–1.51) | 0.2171 | 0.1495 | |
|
|
| 33 (0.287) | 43 (0.223) | 1.00 | 0.4046 | 0.7358 |
|
| 56 (0.487) | 107 (0.554) | 1.47 (0.84–2.56) | |||
|
| 26 (0.226) | 43 (0.223) | 1.27 (0.65–2.47) | |||
| Dominant | 82 (0.713) | 150 (0.777) | 1.40 (0.83–2.38) | 0.2093 | 0.4965 | |
| Recessive | 89 (0.774) | 150 (0.777) | 0.98 (0.56–1.71) | 0.9466 | 0.8806 | |
|
|
| 85 (0.739) | 141 (0.731) | 1.00 | 0.9590 | 0.8303 |
|
| 26 (0.226) | 46 (0.238) | 1.07 (0.61–1.85) | |||
|
| 4 (0.035) | 6 (0.031) | 0.90 (0.25–3.30) | |||
| Dominant | 30 (0.261) | 52 (0.269) | 1.04 (0.62–1.76) | 0.8693 | 0.8443 | |
| Recessive | 111 (0.965) | 187 (0.969) | 0.89 (0.25–3.22) | 0.8602 | 0.6292 | |
|
|
| 71 (0.617) | 127 (0.658) | 1.00 | 0.4767 | 0.5195 |
|
| 39 (0.339) | 62 (0.321) | 0.89 (0.54–1.46) | |||
|
| 5 (0.043) | 4 (0.021) | 0.45 (0.12–1.72) | |||
| Dominant | 44 (0.383) | 66 (0.342) | 0.84 (0.52–1.35) | 0.4724 | 0.3917 | |
| Recessive | 110 (0.957) | 189 (0.979) | 0.47 (0.12–1.77) | 0.2609 | 0.3510 |
p-values multivariable logistic regression. * p value adjusted for BMI before pregnancy; OR—odds ratio, 95% CI—95% confidence interval.
Genotype distributions of study variants in PE subtypes.
| SNP | Genotypes/Models | Controls ( | EOPE ( | LOPE ( | EOPE vs. Control | LOPE vs. Control | EOPE vs. LOPE | |||
|---|---|---|---|---|---|---|---|---|---|---|
| OR (95%CI) |
| OR (95%CI) |
| OR (95%CI) |
| |||||
|
| 1G/1G | 59 (0.305) | 12 (0.218) | 15 (0.250) | 1.00 | 0.4297 | 1.00 | 0.5095 | 1.00 | 0.8007 |
| 1G/2G | 95 (0.492) | 30 (0.545) | 29 (0.483) | 0.64 (0.31–1.36) | 0.83 (0.41–1.68) | 1.29 (0.52–3.23) | ||||
| 2G/2G | 39 (0.202) | 13 (0.236) | 16 (0.267) | 0.61 (0.25–1.48) | 0.62 (0.28–1.40) | 1.02 (0.35–2.92) | ||||
| Dominant | 134 (0.694) | 43 (0.782) | 45 (0.750) | 0.63 (0.31–1.29) | 0.1963 | 0.76 (0.39–1.46) | 0.4024 | 1.19 (0.50–2.84) | 0.6873 | |
| Recessive | 154 (0.798) | 42 (0.764) | 44 (0.733) | 0.82 (0.40–1.67) | 0.5855 | 0.70 (0.36–1.36) | 0.2974 | 0.85 (0.37–1.98) | 0.7083 | |
|
| AA | 86 (0.446) | 21 (0.382) | 21 (0.350) | 1.00 | 0.1841 | 1.00 | 0.4137 | 1.00 | 0.2929 |
| AG | 81 (0.420) | 30 (0.545) | 29 (0.483) | 0.66 (0.35–1.24) | 0.68 (0.36–1.29) | 0.97 (0.44–2.13) | ||||
| GG | 26 (0.134) | 4 (0.073) | 10 (0.167) | 1.59 (0.50–5.04) | 0.63 (0.27–1.52) | 2.50 (0.68–9.25) | ||||
| Dominant | 107 (0.554) | 34 (0.618) | 39 (0.650) | 0.77 (0.42–1.42) | 0.3976 | 0.67 (0.37–1.22) | 0.1874 | 1.15 (0.54–2.45) | 0.7234 | |
| Recessive | 167 (0.865) | 51 (0.927) | 50 (0.833) | 1.99 (0.66–5.95) | 0.1908 | 0.78 (0.35–1.72) | 0.5422 | 2.55 (0.75–8.67) | 0.1176 | |
|
| GG | 144 (0.746) | 40 (0.727) | 41 (0.683) | 1.00 | 0.7361 | 1.00 | 0.4283 | 1.00 | 0.8727 |
| GA | 43 (0.223) | 12 (0.218) | 15 (0.250) | 1.00 (0.48–2.06) | 0.82 (0.41–1.62) | 1.22 (0.51–2.93) | ||||
| AA | 6 (0.031) | 3 (0.055) | 4 (0.067) | 0.56 (0.13–2.32) | 0.43 (0.12–1.59) | 1.30 (0.27–6.18) | ||||
| Dominant | 49 (0.254) | 15 (0.273) | 19 (0.317) | 0.91 (0.46–1.78) | 0.7791 | 0.73 (0.39–1.38) | 0.3436 | 1.24 (0.55–2.76) | 0.6056 | |
| Recessive | 187 (0.969) | 52 (0.945) | 56 (0.933) | 0.56 (0.13–2.30) | 0.4338 | 0.45 (0.12–1.65) | 0.2433 | 1.24 (0.26–5.80) | 0.7855 | |
|
| CC | 43 (0.223) | 19 (0.345) | 14 (0.233) | 1.00 | 0.1426 | 1.00 | 0.4109 | 1.00 | 0.1059 |
| TC | 107 (0.554) | 28 (0.509) | 28 (0.467) | 1.69 (0.85–3.34) | 1.24 (0.60–2.59) | 1.36 (0.57–3.23) | ||||
| TT | 43 (0.223) | 8 (0.145) | 18 (0.300) | 2.38 (0.94–6.01) | 0.78 (0.34–1.76) | 3.05 (1.04–9.01) | ||||
| Dominant | 150 (0.777) | 36 (0.655) | 46 (0.767) | 1.84 (0.96–3.53) | 0.0706 | 1.06 (0.53–2.11) | 0.8645 | 1.73 (0.77–3.92) | 0.1839 | |
| Recessive | 150 (0.777) | 47 (0.855) | 42 (0.700) | 1.68 (0.74–3.83) | 0.1968 | 1.50 (0.78–2.86) | 0.2298 | 2.52 (0.99–6.39) | 0.0452 | |
|
| CC | 141 (0.731) | 39 (0.709) | 46 (0.767) | 1.00 | 0.7759 | 1.00 | 0.5628 | 1.00 | |
| CT | 46 (0.238) | 15 (0.273) | 11 (0.183) | 0.85 (0.43–1.68) | 1.36 (0.65–2.85) | 0.62 (0.26–1.51) | 0.3635 | |||
| TT | 6 (0.031) | 1 (0.018) | 3 (0.050) | 1.66 (0.19–14.20) | 0.65 (0.16–2.71) | 2.54 (0.25–25.45) | ||||
| Dominant | 52 (0.269) | 16 (0.291) | 14 (0.233) | 0.90 (0.46–1.74) | 0.7538 | 1.21 (0.62–2.39) | 0.5749 | 0.74 (0.32–1.71) | 0.4825 | |
| Recessive | 187 (0.969) | 54 (0.982) | 57 (0.950) | 1.73 (0.20–14.70) | 0.5923 | 0.61 (0.15–2.52) | 0.5059 | 2.84 (0.29–28.17) | 0.3401 | |
|
| TT | 127 (0.658) | 32 (0.582) | 39 (0.650) | 1.00 | 0.5588 | 1.00 | 0.2457 | 1.00 | |
| TG | 62 (0.321) | 22 (0.400) | 17 (0.283) | 0.71 (0.38–1.32) | 1.12 (0.59–2.14) | 0.63 (0.29–1.39) | 0.2183 | |||
| GG | 4 (0.021) | 1 (0.018) | 4 (0.067) | 1.01 (0.11–9.33) | 0.31 (0.07–1.29) | 3.28 (0.35–30.85) | ||||
| Dominant | 66 (0.342) | 23 (0.418) | 21 (0.350) | 0.72 (0.39–1.33) | 0.3022 | 0.97 (0.53–1.77) | 0.9090 | 0.75 (0.35–1.59) | 0.4524 | |
| Recessive | 189 (0.979) | 54 (0.982) | 56 (0.933) | 1.14 (0.13–10.44) | 0.9046 | 0.30 (0.07–1.22) | 0.1011 | 3.86 (0.42-35.62) | 0.1863 | |
p value multivariable logistic regression.
Analysis of MMP9 (rs17576 and rs17577) and TIMP2 (rs2277698 and rs55743137) haplotype frequencies with the risk of PE, LOPE and EOPE.
| Frequencies | PE vs. Controls | EOPE vs. Controls | LOPE vs. Controls | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Haplotype | Controls | PE | EOPE | LOPE | OR (95% CI) |
| OR (95% CI) |
| OR (95% CI) |
|
|
| ||||||||||
|
| 0.652 | 0.608 | 0.645 | 0.575 | 0.827 (0.59–1.159) | 0.270 | 0.968 (0.621–1.508) | 0.885 | 0.719 (0.473–1.092) | 0.121 |
|
| 0.204 | 0.213 | 0.190 | 0.233 | 1.052 (0.704–1.57) | 0.804 | 0.916 (0.536–1.567) | 0.751 | 1.182 (0.724–1.93) | 0.501 |
|
| 0.139 | 0.165 | 0.154 | 0.175 | 1.216 (0.774–1.911) | 0.393 | 1.123 (0.621–2.03) | 0.698 | 1.304 (0.751–2.264) | 0.334 |
|
| ||||||||||
|
| 0.803 | 0.786 | 0.781 | 0.791 | 0.905 (0.605–1.355) | 0.629 | 0.878 (0.523–1.473) | 0.623 | 0.931 (0.561–1.546) | 0.784 |
|
| 0.134 | 0.147 | 0.154 | 0.141 | 1.114 (0.698–1.777) | 0.649 | 1.174 (0.648–2.126) | 0.595 | 1.06 (0.587–1.913) | 0.846 |
|
| 0.046 | 0.065 | 0.063 | 0.066 | 1.426 (0.704–2.888) | 0.321 | 1.389 (0.564–3.417) | 0.472 | 1.46 (0.618–3.448) | 0.385 |
Haplotypes below frequency <0.01 are ignored, Pearson’s p.
Figure 1Interaction entropy graph obtained by multifactor dimensionality reduction for matrix metalloproteinases and tissue inhibitor of metalloproteinases in preeclampsia.
Figure 2Association between TIMP1 rs4898 alleles and placenta weight in all studied women.