Literature DB >> 35882686

Lighting up Nobel Prize-winning studies with protein intrinsic disorder.

Lolita Piersimoni1, Marina Abd El Malek1, Twinkle Bhatia1, Julian Bender1, Christin Brankatschk1, Jaime Calvo Sánchez1, Guy W Dayhoff2, Alessio Di Ianni1, Jhonny Oscar Figueroa Parra1, Dailen Garcia-Martinez1, Julia Hesselbarth1, Janett Köppen1, Luca M Lauth1, Laurin Lippik1, Lisa Machner1, Shubhra Sachan1, Lisa Schmidt1, Robin Selle1, Ioannis Skalidis1, Oleksandr Sorokin1, Daniele Ubbiali1, Bruno Voigt1, Alice Wedler1, Alan An Jung Wei1, Peter Zorn1, Alan Keith Dunker3, Marcel Köhn4, Andrea Sinz5, Vladimir N Uversky6.   

Abstract

Intrinsically disordered proteins and regions (IDPs and IDRs) and their importance in biology are becoming increasingly recognized in biology, biochemistry, molecular biology and chemistry textbooks, as well as in current protein science and structural biology curricula. We argue that the sequence → dynamic conformational ensemble → function principle is of equal importance as the classical sequence → structure → function paradigm. To highlight this point, we describe the IDPs and/or IDRs behind the discoveries associated with 17 Nobel Prizes, 11 in Physiology or Medicine and 6 in Chemistry. The Nobel Laureates themselves did not always mention that the proteins underlying the phenomena investigated in their award-winning studies are in fact IDPs or contain IDRs. In several cases, IDP- or IDR-based molecular functions have been elucidated, while in other instances, it is recognized that the respective protein(s) contain IDRs, but the specific IDR-based molecular functions have yet to be determined. To highlight the importance of IDPs and IDRs as general principle in biology, we present here illustrative examples of IDPs/IDRs in Nobel Prize-winning mechanisms and processes.
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Computational methods; Disorder prediction; Intrinsically disordered proteins and regions; Nobel Prize

Mesh:

Substances:

Year:  2022        PMID: 35882686     DOI: 10.1007/s00018-022-04468-y

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.207


  247 in total

Review 1.  Folding funnels, binding funnels, and protein function.

Authors:  C J Tsai; S Kumar; B Ma; R Nussinov
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

Review 2.  Folding and binding cascades: shifts in energy landscapes.

Authors:  C J Tsai; B Ma; R Nussinov
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

Review 3.  Folding funnels and binding mechanisms.

Authors:  B Ma; S Kumar; C J Tsai; R Nussinov
Journal:  Protein Eng       Date:  1999-09

4.  Why are "natively unfolded" proteins unstructured under physiologic conditions?

Authors:  V N Uversky; J R Gillespie; A L Fink
Journal:  Proteins       Date:  2000-11-15

Review 5.  Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm.

Authors:  P E Wright; H J Dyson
Journal:  J Mol Biol       Date:  1999-10-22       Impact factor: 5.469

Review 6.  Intrinsically unstructured proteins.

Authors:  Peter Tompa
Journal:  Trends Biochem Sci       Date:  2002-10       Impact factor: 13.807

7.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

Review 8.  Intrinsically disordered protein.

Authors:  A K Dunker; J D Lawson; C J Brown; R M Williams; P Romero; J S Oh; C J Oldfield; A M Campen; C M Ratliff; K W Hipps; J Ausio; M S Nissen; R Reeves; C Kang; C R Kissinger; R W Bailey; M D Griswold; W Chiu; E C Garner; Z Obradovic
Journal:  J Mol Graph Model       Date:  2001       Impact factor: 2.518

Review 9.  Classification of intrinsically disordered regions and proteins.

Authors:  Robin van der Lee; Marija Buljan; Benjamin Lang; Robert J Weatheritt; Gary W Daughdrill; A Keith Dunker; Monika Fuxreiter; Julian Gough; Joerg Gsponer; David T Jones; Philip M Kim; Richard W Kriwacki; Christopher J Oldfield; Rohit V Pappu; Peter Tompa; Vladimir N Uversky; Peter E Wright; M Madan Babu
Journal:  Chem Rev       Date:  2014-04-29       Impact factor: 60.622

Review 10.  A decade and a half of protein intrinsic disorder: biology still waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

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