Literature DB >> 35880875

Highlighting the Unique Roles of Radical S-Adenosylmethionine Enzymes in Methanogenic Archaea.

Kaleb Boswinkle1, Justin McKinney1, Kylie D Allen1.   

Abstract

Radical S-adenosylmethionine (SAM) enzymes catalyze an impressive variety of difficult biochemical reactions in various pathways across all domains of life. These metalloenzymes employ a reduced [4Fe-4S] cluster and SAM to generate a highly reactive 5'-deoxyadenosyl radical that is capable of initiating catalysis on otherwise unreactive substrates. Interestingly, the genomes of methanogenic archaea encode many unique radical SAM enzymes with underexplored or completely unknown functions. These organisms are responsible for the yearly production of nearly 1 billion tons of methane, a potent greenhouse gas as well as a valuable energy source. Thus, understanding the details of methanogenic metabolism and elucidating the functions of essential enzymes in these organisms can provide insights into strategies to decrease greenhouse gas emissions as well as inform advances in bioenergy production processes. This minireview provides an overview of the current state of the field regarding the functions of radical SAM enzymes in methanogens and discusses gaps in knowledge that should be addressed.

Entities:  

Keywords:  archaea; iron-sulfur cluster; methanogens; radical SAM

Mesh:

Substances:

Year:  2022        PMID: 35880875      PMCID: PMC9380564          DOI: 10.1128/jb.00197-22

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.476


  126 in total

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Authors:  Felix Quitterer; Anja List; Wolfgang Eisenreich; Adelbert Bacher; Michael Groll
Journal:  Angew Chem Int Ed Engl       Date:  2011-11-16       Impact factor: 15.336

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Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

4.  Atlas of the Radical SAM Superfamily: Divergent Evolution of Function Using a "Plug and Play" Domain.

Authors:  Gemma L Holliday; Eyal Akiva; Elaine C Meng; Shoshana D Brown; Sara Calhoun; Ursula Pieper; Andrej Sali; Squire J Booker; Patricia C Babbitt
Journal:  Methods Enzymol       Date:  2018-07-24       Impact factor: 1.600

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Authors:  Valérie de Crécy-Lagard; Céline Brochier-Armanet; Jaunius Urbonavicius; Bernard Fernandez; Gabriela Phillips; Benjamin Lyons; Akiko Noma; Sophie Alvarez; Louis Droogmans; Jean Armengaud; Henri Grosjean
Journal:  Mol Biol Evol       Date:  2010-04-09       Impact factor: 16.240

6.  Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation.

Authors:  U Ermler; W Grabarse; S Shima; M Goubeaud; R K Thauer
Journal:  Science       Date:  1997-11-21       Impact factor: 47.728

7.  NifEN-B complex of Azotobacter vinelandii is fully functional in nitrogenase FeMo cofactor assembly.

Authors:  Jared A Wiig; Yilin Hu; Markus W Ribbe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-05       Impact factor: 11.205

8.  Effect of growth temperature on ether lipid biochemistry in Archaeoglobus fulgidus.

Authors:  Denton Lai; James R Springstead; Harold G Monbouquette
Journal:  Extremophiles       Date:  2007-12-22       Impact factor: 2.395

9.  Biosynthesis of F0, precursor of the F420 cofactor, requires a unique two radical-SAM domain enzyme and tyrosine as substrate.

Authors:  Laure Decamps; Benjamin Philmus; Alhosna Benjdia; Robert White; Tadhg P Begley; Olivier Berteau
Journal:  J Am Chem Soc       Date:  2012-10-24       Impact factor: 15.419

10.  Lysine-2,3-aminomutase and beta-lysine acetyltransferase genes of methanogenic archaea are salt induced and are essential for the biosynthesis of Nepsilon-acetyl-beta-lysine and growth at high salinity.

Authors:  K Pflüger; S Baumann; G Gottschalk; W Lin; H Santos; V Müller
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

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