Literature DB >> 35875875

Automated generation of 0D and 1D reduced-order models of patient-specific blood flow.

Martin R Pfaller1,2,3, Jonathan Pham4, Aekaansh Verma4, Luca Pegolotti1,2, Nathan M Wilson5, David W Parker6, Weiguang Yang1, Alison L Marsden1,2,3,7.   

Abstract

Three-dimensional (3D) cardiovascular fluid dynamics simulations typically require hours to days of computing time on a high-performance computing cluster. One-dimensional (1D) and lumped-parameter zero-dimensional (0D) models show great promise for accurately predicting blood bulk flow and pressure waveforms with only a fraction of the cost. They can also accelerate uncertainty quantification, optimization, and design parameterization studies. Despite several prior studies generating 1D and 0D models and comparing them to 3D solutions, these were typically limited to either 1D or 0D and a singular category of vascular anatomies. This work proposes a fully automated and openly available framework to generate and simulate 1D and 0D models from 3D patient-specific geometries, automatically detecting vessel junctions and stenosis segments. Our only input is the 3D geometry; we do not use any prior knowledge from 3D simulations. All computational tools presented in this work are implemented in the open-source software platform SimVascular. We demonstrate the reduced-order approximation quality against rigid-wall 3D solutions in a comprehensive comparison with N = 72 publicly available models from various anatomies, vessel types, and disease conditions. Relative average approximation errors of flows and pressures typically ranged from 1% to 10% for both 1D and 0D models, measured at the outlets of terminal vessel branches. In general, 0D model errors were only slightly higher than 1D model errors despite requiring only a third of the 1D runtime. Automatically generated ROMs can significantly speed up model development and shift the computational load from high-performance machines to personal computers.
© 2022 John Wiley & Sons Ltd.

Entities:  

Keywords:  cardiovascular fluid dynamics; lumped-parameter networks; one-dimensional blood flow; open-source software; reduced-order models; zero-dimensional blood flow

Mesh:

Year:  2022        PMID: 35875875      PMCID: PMC9561079          DOI: 10.1002/cnm.3639

Source DB:  PubMed          Journal:  Int J Numer Method Biomed Eng        ISSN: 2040-7939            Impact factor:   2.648


  60 in total

1.  Computer simulation of arterial flow with applications to arterial and aortic stenoses.

Authors:  N Stergiopulos; D F Young; T R Rogge
Journal:  J Biomech       Date:  1992-12       Impact factor: 2.712

2.  Optimization of shunt placement for the Norwood surgery using multi-domain modeling.

Authors:  Mahdi Esmaily Moghadam; Francesco Migliavacca; Irene E Vignon-Clementel; Tain-Yen Hsia; Alison L Marsden
Journal:  J Biomech Eng       Date:  2012-05       Impact factor: 2.097

3.  Predicting changes in blood flow in patient-specific operative plans for treating aortoiliac occlusive disease.

Authors:  Nathan M Wilson; Frank R Arko; Charles A Taylor
Journal:  Comput Aided Surg       Date:  2005-07

4.  Pulse wave propagation in a model human arterial network: assessment of 1-D numerical simulations against in vitro measurements.

Authors:  Koen S Matthys; Jordi Alastruey; Joaquim Peiró; Ashraf W Khir; Patrick Segers; Pascal R Verdonck; Kim H Parker; Spencer J Sherwin
Journal:  J Biomech       Date:  2007-07-20       Impact factor: 2.712

5.  Validation of a one-dimensional model of the systemic arterial tree.

Authors:  Philippe Reymond; Fabrice Merenda; Fabienne Perren; Daniel Rüfenacht; Nikos Stergiopulos
Journal:  Am J Physiol Heart Circ Physiol       Date:  2009-05-08       Impact factor: 4.733

6.  One-dimensional and three-dimensional models of cerebrovascular flow.

Authors:  S M Moore; K T Moorhead; J G Chase; T David; J Fink
Journal:  J Biomech Eng       Date:  2005-06       Impact factor: 2.097

7.  A Distributed Lumped Parameter Model of Blood Flow.

Authors:  Mehran Mirramezani; Shawn C Shadden
Journal:  Ann Biomed Eng       Date:  2020-07-01       Impact factor: 3.934

8.  Multi-branched model of the human arterial system.

Authors:  A P Avolio
Journal:  Med Biol Eng Comput       Date:  1980-11       Impact factor: 2.602

9.  Image-based modeling of hemodynamics in coronary artery aneurysms caused by Kawasaki disease.

Authors:  Dibyendu Sengupta; Andrew M Kahn; Jane C Burns; Sethuraman Sankaran; Shawn C Shadden; Alison L Marsden
Journal:  Biomech Model Mechanobiol       Date:  2011-11-27

10.  Comparison of 1D and 3D Models for the Estimation of Fractional Flow Reserve.

Authors:  P J Blanco; C A Bulant; L O Müller; G D Maso Talou; C Guedes Bezerra; P A Lemos; R A Feijóo
Journal:  Sci Rep       Date:  2018-11-22       Impact factor: 4.379

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