| Literature DB >> 35873064 |
K Chellapandi1,2, S Subbarayan3, S De Mandal3, L Ralte4, N Senthil Kumar3, T K Dutta1, I Sharma2.
Abstract
Background: Antibiotic-resistance in E. coli is a global issue affecting humans especially the pediatric population. Antibiotic-resistant E. coli is a pathogen frequently pediatric population as well as healthy adults.Entities:
Keywords: Adherent E. coli; CHO-k1; E. coli pathotypes; HeLa; cell culture; diarrheagenic E. coli; virulent genes
Year: 2022 PMID: 35873064 PMCID: PMC9305617 DOI: 10.1016/j.nmni.2022.100999
Source DB: PubMed Journal: New Microbes New Infect ISSN: 2052-2975
List of Primers used in this study to detect diarrheagenic E. coli (DEC) pathotypes
| Pathotypes | Virulent markers (product size-bp) | Sequence (5′- 3′) | Annealing temp. | References | |
|---|---|---|---|---|---|
| EPEC | F | TGATAAGCTGCAGTCGAATCC | 57 oC | Hegde et al., 2012 | |
| R | CTGAACCAGATCGTAACGGC | ||||
| F | CACCGTTACCGCAGGTGTGA | ||||
| R | GTTGCCGCTTCAGCAGGAGT | ||||
| EAEC | F | CTGGCGAAAGACTGTATCAT | 55 oC | ||
| R | CAATGTATAGAAATCCGCTGTT | ||||
| EIEC | F | CTGGTAGGTATGGTGAGG | 57 oC | ||
| R | CCAGGCCAACAATTATTTCC | ||||
| DAEC | F | GAACGTTGGTTAATGTGG GGTAA | 60 oC | Vidal et al., 2005 | |
| R | TATTCACCGGTCGGTTATCAG T | ||||
| EHEC | F | GCATCATCAAGCGTACGTTCC | 55 oC | Hegde et al., 2012 | |
| R | AATGAGCCAAGCTGGTTAAGCT | ||||
| STEC | F | ACACTGGATGAATCTCAGTGG | 55 oC | Shetty et al., 2012 | |
| R | CTGAATCCCCTCCATTATG | ||||
| F | CCATGACAACGGACAGCAGTT | ||||
| R | CCTGTCAACTGAGCAGCACTTTG | ||||
| ETEC | F | CTCTATGTGCACACGGAGC | 55 oC | Hegde et al., 2012 | |
| R | CCATACTGATTGCCGCAAT | ||||
| F | TCTTTCCCCTCTTTTAGTCAGTC | ||||
| R | CCGCACAGGCAGGATTAC | ||||
Fig. 1Distribution and adhesion pattern of E. coli pathotypes associated with pediatric diarrhoea in Mizo children. A. Distribution of diarrheagenic E. coli isolates. B. Adhesion pattern of E. coli pathotypes on HeLa and CHO-k1.
Cellular adherence and Molecular profiles of E. coli pathotypes
| Strain no. | Serotype | Seasonal | Adherence pattern | Genetic profile | Resistance profile | ||
|---|---|---|---|---|---|---|---|
| HeLa cell line | CHO-k1 cell line | ||||||
| D-21 | EAEC | O55 | Winter | AA | AA | ||
| D-54 | EAEC | O141 | Summer | AA | AA | ||
| D-29 | EPEC (t) | O22 | Summer | LA | LA | ||
| D-36 | EPEC (t) | O22 | Summer | LA | LA | ||
| D-59 | EPEC (a) | O86 | Summer | LAL | LAL | ||
| LR-141 | DAEC | UT | Autumn/rainy | DA | DA | ||
| LR-142 | DAEC | O128 | Autumn/rainy | DA | DA | ||
| LR-143 | DAEC | O141 | Autumn/rainy | AA | DA | -Nil- | |
| D-12 | EIEC | O96 | Summer | LA | DA | ||
| LR-128 | EIEC | O124 | Monsoon | DA | DA | ||
EAEC – Enteroaggregative Escherichia coli, EPEC-Enteropathogenic Escherichia coli, DAEC-Diffusely adherent Escherichia coli, EIEC- Entero-invasive Escherichia coli, LA-localized adherence, LAL-localized-like adherence, DA-diffuse adherence, AA-aggregative adherence patterns.
Fig. 3Percentage adhesions of pathotypes in HeLa and CHO-k1 cell lines.
Quantitative adhesion of bacterial isolates on HeLa and CHO-k1 cell lines
| S. No | Strains | Adhesion on HeLa cells | Adhesion on CHO-k1 cells | ||
|---|---|---|---|---|---|
| (%) | Level | (%) | Level | ||
| 1. | D-21 | 42.6 ± 0.9 | + | 70.0 ± 0.5 | ++ |
| 2. | D-54 | 44.7 ± 0.6 | + | 39.4 ± 0.3 | + |
| 3. | D-29 | 90.0 ± 9.3 | ++ | 60.7 ± 53.0 | ++ |
| 4. | D-36 | 58.3 ± 2.4 | ++ | 32.5 ± 1.4 | + |
| 5. | D-59 | 59.3 ± 3.2 | ++ | 60.7 ± 2.3 | ++ |
| 6. | LR-141 | 13.7 ± 1.3 | — | 55.5 ± 0.7 | ++ |
| 7. | LR-142 | 16.1 ± 14.9 | — | 90.0 ± 8.7 | ++ |
| 8. | LR-143 | 26.7 ± 0.2 | — | 24.7 ± 0.2 | — |
| 9. | D-12 | 27.7 ± 0.4 | — | 26.4 ± 0.2 | — |
| 10. | LR-128 | 33.3 ± 0.6 | + | 34.8 ± 0.3 | + |
(++) strong adhesive; (+) adhesive; (-) non adhesive.
Fig. 2Giemsa stained images of co-cultures of Bacterial strains with HeLa and CHO cell lines. Upper panel: HeLa cell line (A, B- localized adherence (LA) and localized-like adherence (LAL) pattern of Adhesion and C-aggregating Adherence (AA) adhesion pattern of bacterial strains). Lower panel: CHO K1 cell line (D, E- localized adherence (LA) and localized-like adherence (LAL) pattern of Adhesion, and F- aggregating adherence (AA) adhesion pattern of bacterial strains).
Inhibitory concentrations of antimicrobial agents on HeLa and CHO-k1 cell lines against diarrheal E. coli pathotypes
| Pathotypes | MIC on HeLa cell lines | MIC on CHO-k1 cell lines | MIC on nutrient broth (broth dilution method) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Gentamicin (μg/mL) | Cephalexin (μg/mL) | Skimmed milk fragments (μg/mL) | Gentamicin (μg/mL) | Cephalexin (μg/mL) | Skimmed milk fragments (μg/mL) | Gentamicin (μg/mL) | Cephalexin (μg/mL) | Skimmed milk fragments (μg/mL) | |
| 69.56∗ | 67.71∗ | 50.25+ | 69.57∗ | 75.39 | 190.90# | 4.0 | 0.75+ | 0.5+ | |
| 73.70+ | 67.53 | 53.42+ | 73.70+ | 72.55 | 259.70# | 8.0∗ | 8.0 | 16.0+ | |
| 87.05 | 69.20∗ | 72.73∗ | 87.05 | 79.92 | 130.30# | 8.0∗ | 8.0∗ | 12.0# | |
| 83.71 | 68.95∗ | 59.13∗ | 83.71 | 84.82 | 83.88# | 4.0 | 8.0∗ | 24.0# | |
P < 0.05 significant ∗ p < 0.05; +p < 0.01; #p < 0.001.