Literature DB >> 35870089

Expression patterns and therapeutic implications of CDK4 across multiple carcinomas: a molecular docking and MD simulation study.

Hina Qayoom1, Umar Mehraj1, Shazia Sofi1, Shariqa Aisha1, Abdullah Almilaibary2, Mustfa Alkhanani3, Manzoor Ahmad Mir4.   

Abstract

The CDKs are known to play a critical role in cell cycle regulation process. Among the different groups of CDKs, CDK4 overexpression/hyperactivation is found to be present in many cancers and a specific CDK4 inhibitor, palbociclib has been recently approved by the FDA against breast cancer. However, the treatment with palbociclib has shown many associated toxicities such as-anemia, thrombocytopenia, neutropenia, and febrile neutropenia and more. Despite the fact being FDA approved for only breast cancer and no other cancers and CDK4 being overexpressed in multiple cancers. Therefore, we in our study intend to screen two novel CDK4 inhibitors that show considerably less associated toxicities and greater therapeutic implications than palbociclib. We screened the compounds using Lipinski's rule, ADMET analysis and further analyzed the selected compounds using a virtual screening method called molecular docking and validated our results by MD simulation. We studied the expression patterns and prognostic significance of CDK4 across multiple carcinomas by using some database like UALCAN, cBioportal, and KM-Plotter.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  ADMET; CDK4; MD simulation; Molecular docking; Palbociclib; Pan-cancer

Mesh:

Substances:

Year:  2022        PMID: 35870089     DOI: 10.1007/s12032-022-01779-9

Source DB:  PubMed          Journal:  Med Oncol        ISSN: 1357-0560            Impact factor:   3.738


  47 in total

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Journal:  Discov Med       Date:  2016-01       Impact factor: 2.970

Review 5.  Prognostic significance and targeting tumor-associated macrophages in cancer: new insights and future perspectives.

Authors:  Umar Mehraj; Hina Qayoom; Manzoor A Mir
Journal:  Breast Cancer       Date:  2021-03-04       Impact factor: 4.239

6.  Expression Pattern and Prognostic Significance of Chemokines in Breast cancer: An Integrated Bioinformatics Analysis.

Authors:  Umar Mehraj; Bader Alshehri; Azmat Ali Khan; Ajaz A Bhat; Puneet Bagga; Nissar Ahmad Wani; Manzoor Ahmad Mir
Journal:  Clin Breast Cancer       Date:  2022-04-25       Impact factor: 3.078

Review 7.  Cell cycle, CDKs and cancer: a changing paradigm.

Authors:  Marcos Malumbres; Mariano Barbacid
Journal:  Nat Rev Cancer       Date:  2009-03       Impact factor: 60.716

8.  A meta-analysis of osteosarcoma outcomes in the modern medical era.

Authors:  Daniel C Allison; Scott C Carney; Elke R Ahlmann; Andrew Hendifar; Sant Chawla; Alex Fedenko; Constance Angeles; Lawrence R Menendez
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9.  Cyclin-dependent kinase pathway aberrations in diverse malignancies: clinical and molecular characteristics.

Authors:  Shumei Kato; Maria Schwaederle; Gregory A Daniels; David Piccioni; Santosh Kesari; Lyudmila Bazhenova; Kelly Shimabukuro; Barbara A Parker; Paul Fanta; Razelle Kurzrock
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

Review 10.  An insight into the cancer stem cell survival pathways involved in chemoresistance in triple-negative breast cancer.

Authors:  Hina Qayoom; Nissar A Wani; Bader Alshehri; Manzoor A Mir
Journal:  Future Oncol       Date:  2021-08-03       Impact factor: 3.404

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