Literature DB >> 35868275

Synthetic chromosomes, genomes, viruses, and cells.

J Craig Venter1, John I Glass2, Clyde A Hutchison2, Sanjay Vashee2.   

Abstract

Synthetic genomics is the construction of viruses, bacteria, and eukaryotic cells with synthetic genomes. It involves two basic processes: synthesis of complete genomes or chromosomes and booting up of those synthetic nucleic acids to make viruses or living cells. The first synthetic genomics efforts resulted in the construction of viruses. This led to a revolution in viral reverse genetics and improvements in vaccine design and manufacture. The first bacterium with a synthetic genome led to construction of a minimal bacterial cell and recoded Escherichia coli strains able to incorporate multiple non-standard amino acids in proteins and resistant to phage infection. Further advances led to a yeast strain with a synthetic genome and new approaches for animal and plant artificial chromosomes. On the horizon there are dramatic advances in DNA synthesis that will enable extraordinary new opportunities in medicine, industry, agriculture, and research.
Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35868275      PMCID: PMC9347161          DOI: 10.1016/j.cell.2022.06.046

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   66.850


  99 in total

1.  Synthetic Biology: The Response of the Commission of the (Catholic) Bishops' Conferences of the European Community.

Authors:  Patrick Heavey
Journal:  Camb Q Healthc Ethics       Date:  2017-04       Impact factor: 1.284

2.  Nonviral delivery of self-amplifying RNA vaccines.

Authors:  Andrew J Geall; Ayush Verma; Gillis R Otten; Christine A Shaw; Armin Hekele; Kaustuv Banerjee; Yen Cu; Clayton W Beard; Luis A Brito; Thomas Krucker; Derek T O'Hagan; Manmohan Singh; Peter W Mason; Nicholas M Valiante; Philip R Dormitzer; Susan W Barnett; Rino Rappuoli; Jeffrey B Ulmer; Christian W Mandl
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-20       Impact factor: 11.205

3.  Synthetic generation of influenza vaccine viruses for rapid response to pandemics.

Authors:  Philip R Dormitzer; Pirada Suphaphiphat; Daniel G Gibson; David E Wentworth; Timothy B Stockwell; Mikkel A Algire; Nina Alperovich; Mario Barro; David M Brown; Stewart Craig; Brian M Dattilo; Evgeniya A Denisova; Ivna De Souza; Markus Eickmann; Vivien G Dugan; Annette Ferrari; Raul C Gomila; Liqun Han; Casey Judge; Sarthak Mane; Mikhail Matrosovich; Chuck Merryman; Giuseppe Palladino; Gene A Palmer; Terika Spencer; Thomas Strecker; Heidi Trusheim; Jennifer Uhlendorff; Yingxia Wen; Anthony C Yee; Jayshree Zaveri; Bin Zhou; Stephan Becker; Armen Donabedian; Peter W Mason; John I Glass; Rino Rappuoli; J Craig Venter
Journal:  Sci Transl Med       Date:  2013-05-15       Impact factor: 17.956

4.  Creation of a bacterial cell controlled by a chemically synthesized genome.

Authors:  Daniel G Gibson; John I Glass; Carole Lartigue; Vladimir N Noskov; Ray-Yuan Chuang; Mikkel A Algire; Gwynedd A Benders; Michael G Montague; Li Ma; Monzia M Moodie; Chuck Merryman; Sanjay Vashee; Radha Krishnakumar; Nacyra Assad-Garcia; Cynthia Andrews-Pfannkoch; Evgeniya A Denisova; Lei Young; Zhi-Qing Qi; Thomas H Segall-Shapiro; Christopher H Calvey; Prashanth P Parmar; Clyde A Hutchison; Hamilton O Smith; J Craig Venter
Journal:  Science       Date:  2010-05-20       Impact factor: 47.728

5.  Replicating minichromosomes as a new tool for plastid genome engineering.

Authors:  Anna Jakubiec; Alena Sarokina; Sandrine Choinard; Florina Vlad; Isabelle Malcuit; Alexander P Sorokin
Journal:  Nat Plants       Date:  2021-06-21       Impact factor: 15.793

6.  Genome-wide engineering of an infectious clone of herpes simplex virus type 1 using synthetic genomics assembly methods.

Authors:  Lauren M Oldfield; Peter Grzesik; Alexander A Voorhies; Nina Alperovich; Derek MacMath; Claudia D Najera; Diya Sabrina Chandra; Sanjana Prasad; Vladimir N Noskov; Michael G Montague; Robert M Friedman; Prashant J Desai; Sanjay Vashee
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-19       Impact factor: 11.205

7.  Design of a synthetic yeast genome.

Authors:  Sarah M Richardson; Leslie A Mitchell; Giovanni Stracquadanio; Kun Yang; Jessica S Dymond; James E DiCarlo; Dongwon Lee; Cheng Lai Victor Huang; Srinivasan Chandrasegaran; Yizhi Cai; Jef D Boeke; Joel S Bader
Journal:  Science       Date:  2017-03-10       Impact factor: 47.728

8.  Efficient initiation of HCV RNA replication in cell culture.

Authors:  K J Blight; A A Kolykhalov; C M Rice
Journal:  Science       Date:  2000-12-08       Impact factor: 47.728

9.  Large-scale recoding of a bacterial genome by iterative recombineering of synthetic DNA.

Authors:  Yu Heng Lau; Finn Stirling; James Kuo; Michiel A P Karrenbelt; Yujia A Chan; Adam Riesselman; Connor A Horton; Elena Schäfer; David Lips; Matthew T Weinstock; Daniel G Gibson; Jeffrey C Way; Pamela A Silver
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

10.  Chemical synthesis rewriting of a bacterial genome to achieve design flexibility and biological functionality.

Authors:  Jonathan E Venetz; Luca Del Medico; Alexander Wölfle; Philipp Schächle; Yves Bucher; Donat Appert; Flavia Tschan; Carlos E Flores-Tinoco; Mariëlle van Kooten; Rym Guennoun; Samuel Deutsch; Matthias Christen; Beat Christen
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-01       Impact factor: 11.205

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