Literature DB >> 35852340

Forty Years of Molecular Diagnostics for Infectious Diseases.

Jonathan E Schmitz1,2,3, Charles W Stratton1,3, David H Persing4, Yi-Wei Tang5.   

Abstract

Nearly 40 years have elapsed since the invention of the PCR, with its extremely sensitive and specific ability to detect nucleic acids via in vitro enzyme-mediated amplification. In turn, more than 2 years have passed since the onset of the coronavirus disease 2019 (COVID-19) pandemic, during which time molecular diagnostics for infectious diseases have assumed a larger global role than ever before. In this context, we review broadly the progression of molecular techniques in clinical microbiology, to their current prominence. Notably, these methods now entail both the detection and quantification of microbial nucleic acids, along with their sequence-based characterization. Overall, we seek to provide a combined perspective on the techniques themselves, as well as how they have come to shape health care at the intersection of technologic innovation, pathophysiologic knowledge, clinical/laboratory logistics, and even financial/regulatory factors.

Entities:  

Keywords:  DNA sequencing; PCR; diagnostic molecular microbiology; magnetic beads; nucleotide array; point of care; real-time quantitative PCR; sequencing; syndromic panel

Mesh:

Substances:

Year:  2022        PMID: 35852340      PMCID: PMC9580468          DOI: 10.1128/jcm.02446-21

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   11.677


  146 in total

1.  Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. 1986.

Authors:  K Mullis; F Faloona; S Scharf; R Saiki; G Horn; H Erlich
Journal:  Biotechnology       Date:  1992

2.  The LightCycler: a microvolume multisample fluorimeter with rapid temperature control.

Authors:  C T Wittwer; K M Ririe; R V Andrew; D A David; R A Gundry; U J Balis
Journal:  Biotechniques       Date:  1997-01       Impact factor: 1.993

Review 3.  The GenMark ePlex®: another weapon in the syndromic arsenal for infection diagnosis.

Authors:  Jonathan E Schmitz; Yi-Wei Tang
Journal:  Future Microbiol       Date:  2018-12-14       Impact factor: 3.165

4.  The value of outcomes data in the practice of clinical microbiology.

Authors:  Gary V Doern
Journal:  J Clin Microbiol       Date:  2014-03-12       Impact factor: 5.948

5.  Comparison of an In Vitro Diagnostic Next-Generation Sequencing Assay with Sanger Sequencing for HIV-1 Genotypic Resistance Testing.

Authors:  Philip L Tzou; Pramila Ariyaratne; Vici Varghese; Charlie Lee; Elian Rakhmanaliev; Carolin Villy; Meiqi Yee; Kevin Tan; Gerd Michel; Benjamin A Pinsky; Robert W Shafer
Journal:  J Clin Microbiol       Date:  2018-05-25       Impact factor: 5.948

6.  Impact of Gastrointestinal Panel Implementation on Health Care Utilization and Outcomes.

Authors:  Jordan E Axelrad; Daniel E Freedberg; Susan Whittier; William Greendyke; Benjamin Lebwohl; Daniel A Green
Journal:  J Clin Microbiol       Date:  2019-02-27       Impact factor: 5.948

7.  Implementation of the new EU IVD regulation - urgent initiatives are needed to avert impending crisis.

Authors:  Christa Cobbaert; Ettore D Capoluongo; Florent J L A Vanstapel; Patrick M M Bossuyt; Harjit Pal Bhattoa; Peter Henrik Nissen; Matthias Orth; Thomas Streichert; Ian S Young; Elizabeth Macintyre; Alan G Fraser; Michael Neumaier
Journal:  Clin Chem Lab Med       Date:  2021-09-15       Impact factor: 3.694

8.  Multicenter clinical evaluation of the novel Alere™ i Influenza A&B isothermal nucleic acid amplification test.

Authors:  Jeremiah Bell; Aleta Bonner; Daniel M Cohen; Robert Birkhahn; Ram Yogev; Wayne Triner; Jason Cohen; Elizabeth Palavecino; Rangaraj Selvarangan
Journal:  J Clin Virol       Date:  2014-06-07       Impact factor: 3.168

Review 9.  In vitro amplification techniques for the detection of nucleic acids: new tools for the diagnostic laboratory.

Authors:  D H Persing; M L Landry
Journal:  Yale J Biol Med       Date:  1989 Mar-Apr

10.  Molecular Testing for Acute Respiratory Tract Infections: Clinical and Diagnostic Recommendations From the IDSA's Diagnostics Committee.

Authors:  Kimberly E Hanson; Marwan M Azar; Ritu Banerjee; Andrew Chou; Robert C Colgrove; Christine C Ginocchio; Mary K Hayden; Mark Holodiny; Seema Jain; Sophia Koo; Jaclyn Levy; Tristan T Timbrook; Angela M Caliendo
Journal:  Clin Infect Dis       Date:  2020-12-17       Impact factor: 9.079

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