Literature DB >> 35851668

Optimal Number of Clusters by Measuring Similarity Among Topographies for Spatio-Temporal ERP Analysis.

Reza Mahini1,2, Peng Xu3, Guoliang Chen3, Yansong Li4,5, Weiyan Ding3, Lei Zhang3, Nauman Khalid Qureshi6, Timo Hämäläinen2, Asoke K Nandi7, Fengyu Cong8,9,10,11.   

Abstract

Averaging amplitudes over consecutive time samples (i.e., time window) is widely used to calculate the peak amplitude of event-related potentials (ERPs). Cluster analysis of the spatio-temporal ERP data is a promising tool to determine the time window of an ERP of interest. However, determining an appropriate number of clusters to optimally represent ERPs is still challenging. Here, we develop a new method to estimate the optimal number of clusters utilizing consensus clustering. Various polarity dependent clustering methods, namely, k-means, hierarchical clustering, fuzzy c-means, self-organizing map, spectral clustering, and Gaussian mixture model, are used to configure consensus clustering after assessing them individually. When a range of clusters is applied many times, the optimal number of clusters should correspond to the expectation, which is the average of the obtained mean inner-similarities of estimated time windows across all conditions and groups converge in the satisfactory thresholds. In order to assess our method, the proposed method has been applied to simulated data and prospective memory experiment ERP data aimed to qualify N2 and P3, and N300 and prospective positivity components, respectively. The results of determining the optimal number of clusters meet at six cluster maps for both ERP data. In addition, our results revealed that the proposed method could be reliably applied to ERP data to determine the appropriate time window for the ERP of interest when the measurement interval is not accurately defined.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Consensus clustering; Event-related potentials; Microstates; Optimal number of clusters; Time window; Topographical analysis

Year:  2022        PMID: 35851668     DOI: 10.1007/s10548-022-00903-2

Source DB:  PubMed          Journal:  Brain Topogr        ISSN: 0896-0267            Impact factor:   4.275


  25 in total

1.  On clustering fMRI time series.

Authors:  C Goutte; P Toft; E Rostrup; F Nielsen; L K Hansen
Journal:  Neuroimage       Date:  1999-03       Impact factor: 6.556

2.  EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis.

Authors:  Arnaud Delorme; Scott Makeig
Journal:  J Neurosci Methods       Date:  2004-03-15       Impact factor: 2.390

3.  Manipulation of orthogonal neural systems together in electrophysiological recordings: the MONSTER approach to simultaneous assessment of multiple neurocognitive dimensions.

Authors:  Emily S Kappenman; Steven J Luck
Journal:  Schizophr Bull       Date:  2011-11-10       Impact factor: 9.306

4.  Electroencephalographic Resting-State Networks: Source Localization of Microstates.

Authors:  Anna Custo; Dimitri Van De Ville; William M Wells; Miralena I Tomescu; Denis Brunet; Christoph M Michel
Journal:  Brain Connect       Date:  2017-11-17

5.  Relation between remission status and attention in patients with schizophrenia.

Authors:  Motoyuki Fukumoto; Ryota Hashimoto; Kazutaka Ohi; Yuka Yasuda; Hidenaga Yamamori; Satomi Umeda-Yano; Masao Iwase; Hiroaki Kazui; Masatoshi Takeda
Journal:  Psychiatry Clin Neurosci       Date:  2013-12-08       Impact factor: 5.188

6.  Capturing the spatiotemporal dynamics of self-generated, task-initiated thoughts with EEG and fMRI.

Authors:  Lucie Bréchet; Denis Brunet; Gwénaël Birot; Rolf Gruetter; Christoph M Michel; João Jorge
Journal:  Neuroimage       Date:  2019-03-19       Impact factor: 6.556

Review 7.  A review of group ICA for fMRI data and ICA for joint inference of imaging, genetic, and ERP data.

Authors:  Vince D Calhoun; Jingyu Liu; Tülay Adali
Journal:  Neuroimage       Date:  2008-11-13       Impact factor: 6.556

8.  Spatiotemporal analysis of multichannel EEG: CARTOOL.

Authors:  Denis Brunet; Micah M Murray; Christoph M Michel
Journal:  Comput Intell Neurosci       Date:  2011-01-05

9.  Modeling Uncertainties in EEG Microstates: Analysis of Real and Imagined Motor Movements Using Probabilistic Clustering-Driven Training of Probabilistic Neural Networks.

Authors:  Martin Dinov; Robert Leech
Journal:  Front Hum Neurosci       Date:  2017-11-01       Impact factor: 3.169

10.  Decreased Intra- and Inter-Salience Network Functional Connectivity is Related to Trait Anxiety in Adolescents.

Authors:  Haiyang Geng; Xuebing Li; Jie Chen; Xinying Li; Ruolei Gu
Journal:  Front Behav Neurosci       Date:  2016-01-21       Impact factor: 3.558

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