Literature DB >> 35839759

Metabolic analysis as a driver for discovery, diagnosis, and therapy.

Ralph J DeBerardinis1, Kayvan R Keshari2.   

Abstract

Metabolic anomalies contribute to tissue dysfunction. Current metabolism research spans from organelles to populations, and new technologies can accommodate investigation across these scales. Here, we review recent advancements in metabolic analysis, including small-scale metabolomics techniques amenable to organelles and rare cell types, functional screening to explore how cells respond to metabolic stress, and imaging approaches to non-invasively assess metabolic perturbations in diseases. We discuss how metabolomics provides an informative phenotypic dimension that complements genomic analysis in Mendelian and non-Mendelian disorders. We also outline pressing challenges and how addressing them may further clarify the biochemical basis of human disease.
Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  genomics; magnetic resonance; metabolism; metabolomics; molecular imaging; positron emission tomography; stable isotopes

Mesh:

Year:  2022        PMID: 35839759      PMCID: PMC9469798          DOI: 10.1016/j.cell.2022.06.029

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   66.850


  89 in total

1.  Human metabolic individuality in biomedical and pharmaceutical research.

Authors:  So-Youn Shin; Ann-Kristin Petersen; Nicole Soranzo; Christian Gieger; Karsten Suhre; Robert P Mohney; David Meredith; Brigitte Wägele; Elisabeth Altmaier; Panos Deloukas; Jeanette Erdmann; Elin Grundberg; Christopher J Hammond; Martin Hrabé de Angelis; Gabi Kastenmüller; Anna Köttgen; Florian Kronenberg; Massimo Mangino; Christa Meisinger; Thomas Meitinger; Hans-Werner Mewes; Michael V Milburn; Cornelia Prehn; Johannes Raffler; Janina S Ried; Werner Römisch-Margl; Nilesh J Samani; Kerrin S Small; H-Erich Wichmann; Guangju Zhai; Thomas Illig; Tim D Spector; Jerzy Adamski
Journal:  Nature       Date:  2011-08-31       Impact factor: 49.962

2.  Apollo-NADP(+): a spectrally tunable family of genetically encoded sensors for NADP(+).

Authors:  William D Cameron; Cindy V Bui; Ashley Hutchinson; Peter Loppnau; Susanne Gräslund; Jonathan V Rocheleau
Journal:  Nat Methods       Date:  2016-02-15       Impact factor: 28.547

Review 3.  The collaborative cross: a recombinant inbred mouse population for the systems genetic era.

Authors:  David W Threadgill; Darla R Miller; Gary A Churchill; Fernando Pardo-Manuel de Villena
Journal:  ILAR J       Date:  2011

4.  [18F](2S,4R)4-Fluoroglutamine PET Detects Glutamine Pool Size Changes in Triple-Negative Breast Cancer in Response to Glutaminase Inhibition.

Authors:  Rong Zhou; Austin R Pantel; Shihong Li; Brian P Lieberman; Karl Ploessl; Hoon Choi; Eric Blankemeyer; Hsiaoju Lee; Hank F Kung; Robert H Mach; David A Mankoff
Journal:  Cancer Res       Date:  2017-02-15       Impact factor: 12.701

5.  SLC25A39 is necessary for mitochondrial glutathione import in mammalian cells.

Authors:  Ying Wang; Frederick S Yen; Xiphias Ge Zhu; Rebecca C Timson; Ross Weber; Changrui Xing; Yuyang Liu; Benjamin Allwein; Hanzhi Luo; Hsi-Wen Yeh; Søren Heissel; Gokhan Unlu; Eric R Gamazon; Michael G Kharas; Richard Hite; Kıvanç Birsoy
Journal:  Nature       Date:  2021-10-27       Impact factor: 69.504

6.  A genome-wide perspective of genetic variation in human metabolism.

Authors:  Thomas Illig; Christian Gieger; Guangju Zhai; Werner Römisch-Margl; Rui Wang-Sattler; Cornelia Prehn; Elisabeth Altmaier; Gabi Kastenmüller; Bernet S Kato; Hans-Werner Mewes; Thomas Meitinger; Martin Hrabé de Angelis; Florian Kronenberg; Nicole Soranzo; H-Erich Wichmann; Tim D Spector; Jerzy Adamski; Karsten Suhre
Journal:  Nat Genet       Date:  2009-12-27       Impact factor: 38.330

Review 7.  The Purinosome: A Case Study for a Mammalian Metabolon.

Authors:  Anthony M Pedley; Vidhi Pareek; Stephen J Benkovic
Journal:  Annu Rev Biochem       Date:  2022-03-23       Impact factor: 27.258

8.  1H magnetic resonance spectroscopy of 2H-to-1H exchange quantifies the dynamics of cellular metabolism in vivo.

Authors:  Laurie J Rich; Puneet Bagga; Neil E Wilson; Mitchell D Schnall; John A Detre; Mohammad Haris; Ravinder Reddy
Journal:  Nat Biomed Eng       Date:  2020-01-27       Impact factor: 25.671

9.  In Vivo Imaging of Glutamine Metabolism to the Oncometabolite 2-Hydroxyglutarate in IDH1/2 Mutant Tumors.

Authors:  Lucia Salamanca-Cardona; Hardik Shah; Alex J Poot; Fabian M Correa; Valentina Di Gialleonardo; Hui Lui; Vesselin Z Miloushev; Kristin L Granlund; Sui S Tee; Justin R Cross; Craig B Thompson; Kayvan R Keshari
Journal:  Cell Metab       Date:  2017-10-19       Impact factor: 31.373

10.  A unique subset of glycolytic tumour-propagating cells drives squamous cell carcinoma.

Authors:  Jee-Eun Choi; Carlos Sebastian; Christina M Ferrer; Caroline A Lewis; Moshe Sade-Feldman; Thomas LaSalle; Anna Gonye; Begona G C Lopez; Walid M Abdelmoula; Michael S Regan; Murat Cetinbas; Gloria Pascual; Gregory R Wojtkiewicz; Giorgia G Silveira; Ruben Boon; Kenneth N Ross; Itay Tirosh; Srinivas V Saladi; Leif W Ellisen; Ruslan I Sadreyev; Salvador Aznar Benitah; Nathalie Y R Agar; Nir Hacohen; Raul Mostoslavsky
Journal:  Nat Metab       Date:  2021-02-22
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