| Literature DB >> 35821963 |
Changnian Han1, Peng Zhang1,2, Danny Bluestein2, Guojing Cong3, Yuefan Deng1.
Abstract
We developed a novel data-driven Artificial Intelligence-enhanced Adaptive Time Stepping algorithm (AI-ATS) that can adapt timestep sizes to underlying biophysical dynamics. We demonstrated its values in solving a complex biophysical problem, at multiple spatiotemporal scales, that describes platelet dynamics in shear blood flow. In order to achieve a significant speedup of this computationally demanding problem, we integrated a framework of novel AI algorithms into the solution of the platelet dynamics equations. Our framework involves recurrent neural network-based autoencoders by the Long Short-Term Memory and the Gated Recurrent Units as the first step for memorizing the dynamic states in long-term dependencies for the input time series, followed by two fully-connected neural networks to optimize timestep sizes and step jumps. The computational efficiency of our AI-ATS is underscored by assessing the accuracy and speed of a multiscale simulation of the platelet with the standard time stepping algorithm (STS). By adapting the timestep size, our AI-ATS guides the omission of multiple redundant time steps without sacrificing significant accuracy of the dynamics. Compared to the STS, our AI-ATS achieved a reduction of 40% unnecessary calculations while bounding the errors of mechanical and thermodynamic properties to 3%.Entities:
Keywords: Adaptive time stepping; Artificial intelligence; Multiscale modeling; Platelet dynamics
Year: 2020 PMID: 35821963 PMCID: PMC9273111 DOI: 10.1016/j.jcp.2020.110053
Source DB: PubMed Journal: J Comput Phys ISSN: 0021-9991 Impact factor: 4.645