Literature DB >> 35819818

Methyl Substitution Destabilizes Alkyl Radicals.

Eva Blokker1, Willem-Jan van Zeist1, Xiaobo Sun1,2, Jordi Poater2,3, J Martijn van der Schuur4, Trevor A Hamlin1, F Matthias Bickelhaupt1,5.   

Abstract

We have quantum chemically investigated how methyl substituents affect the stability of alkyl radicals Mem H3-m C⋅ and the corresponding Mem H3-m C-X bonds (X = H, CH3 , OH; m = 0 - 3) using density functional theory at M06-2X/TZ2P. The state-of-the-art in physical organic chemistry is that alkyl radicals are stabilized upon an increase in their degree of substitution from methyl<primary<secondary<tertiary, and that this is the underlying cause for the decrease in C-H bond strength along this series. Here, we provide evidence that falsifies this model and show that, on the contrary, the Mem H3-m C⋅ radical is destabilized with increasing substitution. The reason that the corresponding C-H bond nevertheless becomes weaker is that substitution destabilizes the sterically more congested Mem H3-m C-H molecule even more.
© 2022 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.

Entities:  

Keywords:  Bond Dissociation Energy; Bonding Theory; Density Functional Calculations; Radicals; Substituent Effects

Year:  2022        PMID: 35819818      PMCID: PMC9545886          DOI: 10.1002/anie.202207477

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   16.823


The C−H bond strength in simple alkanes decreases as the degree of substitution on the carbon atom increases, for example, along the series of methane (H3C−H), ethane (MeH2C−H), propane (Me2HC−H), and 2‐methylpropane (Me3C−H). The current explanation for this trend in C−H bond strength is that the alkyl radicals, formed from homolytic C−H bond dissociation, are stabilized by alkyl substitution and that this stabilization is enhanced as the number of stabilizing substituents increases.[ , , , ] Radical stability is commonly quantified using the concept of “radical stabilization energy” (RSE). For the radical MemH3−mC⋅ (m = 0 – 3), the RSE is defined through the isodesmic reaction in Equation (1) which relates its stability to that of the unsubstituted methyl radical as a reference system.[ , ] Experimental RSE values are 3.8 ± 0.5 kcal mol−1, 6.3 ± 0.5 kcal mol−1 and 8.4 ± 0.5 kcal mol−1 for primary, secondary and tertiary radicals, respectively, which are interpreted as indicating the larger stability of the substituted relative to the unsubstituted CH3⋅ radical. However, several authors have previously noted complications with this definition.[ , , , , , , , ] For example, in the case of different bonds than C−H, the trend in RSE may change. A case in point is the C−O bond, which becomes stronger, not weaker, as the degree of substitution increases along the series methanol (H3C−OH), ethanol (MeH2C−OH), 2‐propanol (Me2HC−OH), and 2‐methyl‐2‐propanol (Me3C−OH). Thus, in this series of C−O bonds, the unsubstituted methyl radical emerges as the most stable radical, instead of the least stable, suggesting that the substituents would destabilize the radical center. This leaves us with the conflicting picture that RSE trends for C−H and C−O bonds suggest opposite behavior of the methyl groups on the stability of the radical. Herein, we reveal the origin of the conflicting pictures suggested by the trends in RSE values as defined in Equation (1). And, more importantly, we show that methyl substituents, in fact, destabilize alkyl radicals in all cases studied. Whether the C−X bond in MemH3−mC−X becomes weaker or stronger upon methyl substitution, depends on if the substituents destabilize the parent molecule more or less, respectively, than the corresponding radical MemH3−mC⋅. To achieve our objectives, we have analyzed the carbon–substituent interaction in both, the parent molecule and the radical species, as shown in Scheme 1, for representative model systems X = H, CH3, and OH, using Voronoi Deformation Density (VDD) charges and Kohn–Sham molecular orbital (MO) theory at M06‐2X/TZ2P, as implemented in the ADF program.[ , , , , , ]
Scheme 1

Interaction of the substituents R with the C−X moiety (left side) or with the radical center at C (right side) upon homolytic C−X bond dissociation.

Interaction of the substituents R with the C−X moiety (left side) or with the radical center at C (right side) upon homolytic C−X bond dissociation. Table 1 shows our computed MemH3−mC−X bond dissociation enthalpies ΔH BDE (BDEs) and bond lengths d C−X for X = H, CH3, and OH. The C−H bond indeed weakens as the degree of methyl substitution increases, from 103.7 kcal mol−1 for H3C−H to 95.2 kcal mol−1 for Me3C−H.[ , ] Likewise, the C−C bond also weakens as the degree of methyl substitution increases, although to a lesser extent, from 90.0 kcal mol−1 for H3C−CH3 to 86.3 kcal mol−1 for Me3C−CH3. At variance, the C−O bond does not weaken but becomes stronger as the degree of methyl substitution increases, namely, from 92.8 kcal mol−1 for H3C−OH to 95.8 kcal mol−1 for Me3C−OH. All C−X bonds become slightly longer upon increasing methyl substitution, up to ca. one hundredth of an Ångstrom, if one goes from m = 0 to m = 3 (Table 1).
Table 1

MemH3−mC−X (m = 0 – 3) bond dissociation energies and enthalpies (ΔE BDE, ΔH BDE), decomposition of ΔH BDE using the thermochemical cycle in Scheme 2 [in kcal mol−1], and C−X bond lengths [in Å].[a]

MemH3−mC−X

m

Name

ΔE BDE

ΔH BDE

ΔH Par(X,m)

ΔH Rad(m)

d C−X

H3C−H

0

methane

111.6

103.7

−331.9

−399.5

1.087

MeH2C−H

1

ethane

107.7

99.8

−318.3

−389.7

1.089

Me2HC−H

2

propane

104.7

96.9

−307.0

−381.3

1.091

Me3C−H

3

2‐methylpropane

102.7

95.2

−297.4

−373.5

1.093

H3C−CH3

0

ethane

97.4

90.0

−325.2

−399.5

1.525

MeH2C−CH3

1

propane

95.4

88.5

−313.9

−389.7

1.524

Me2HC−CH3

2

2‐methylpropane

93.8

87.3

−304.3

−381.3

1.526

Me3C−CH3

3

2,2‐dimethylpropane

92.3

86.3

−295.5

−373.5

1.529

H3C−OH

0

methanol

99.3

92.8

−337.8

−399.5

1.414

MeH2C−OH

1

ethanol

100.1

94.2

−329.5

−389.7

1.419

Me2HC−OH

2

2‐propanol

100.7

95.3

−322.2

−381.3

1.423

Me3C−OH

3

2‐methyl‐2‐propanol

100.6

95.8

−314.8

−373.5

1.428

[a] Computed at M06‐2X/TZ2P (298.15 K and 1 atm). See also Figure 1. ΔH BDE of C…−H, C…−CH3, and C…−OH is 171.3, 164.3, and 154.5 kcal mol−1, respectively.

MemH3−mC−X (m = 0 – 3) bond dissociation energies and enthalpies (ΔE BDE, ΔH BDE), decomposition of ΔH BDE using the thermochemical cycle in Scheme 2 [in kcal mol−1], and C−X bond lengths [in Å].[a]
Scheme 2

Thermodynamic cycle for the MemH3−mC−X bond dissociation energy.

MemH3−mC−X m Name ΔE BDE ΔH BDE ΔH Par(X,m) ΔH Rad(m) d C−X H3C−H 0 methane 111.6 103.7 −331.9 −399.5 1.087 MeH2C−H 1 ethane 107.7 99.8 −318.3 −389.7 1.089 Me2HC−H 2 propane 104.7 96.9 −307.0 −381.3 1.091 Me3C−H 3 2‐methylpropane 102.7 95.2 −297.4 −373.5 1.093 H3C−CH3 0 ethane 97.4 90.0 −325.2 −399.5 1.525 MeH2C−CH3 1 propane 95.4 88.5 −313.9 −389.7 1.524 Me2HC−CH3 2 2‐methylpropane 93.8 87.3 −304.3 −381.3 1.526 Me3C−CH3 3 2,2‐dimethylpropane 92.3 86.3 −295.5 −373.5 1.529 H3C−OH 0 methanol 99.3 92.8 −337.8 −399.5 1.414 MeH2C−OH 1 ethanol 100.1 94.2 −329.5 −389.7 1.419 Me2HC−OH 2 2‐propanol 100.7 95.3 −322.2 −381.3 1.423 Me3C−OH 3 2‐methyl‐2‐propanol 100.6 95.8 −314.8 −373.5 1.428 [a] Computed at M06‐2X/TZ2P (298.15 K and 1 atm). See also Figure 1. ΔH BDE of C…−H, C…−CH3, and C…−OH is 171.3, 164.3, and 154.5 kcal mol−1, respectively.
Figure 1

Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on ΔH Par(X,m) and ΔH Rad(m) in Scheme 2 for X = H, CH3 and OH. Computed at M06‐2X/TZ2P at 298.15 K and 1 atm.

The C−X bond to a methyl group is weaker than the C−X bond to a hydrogen atom; for instance, H3C−CH3 has a BDE of 90.0 kcal mol−1, whereas H3C−H has a BDE of 103.7 kcal mol−1 (Table 1). This is also true for the C−X bond in the alkyl radicals MemH2−mC⋅−X (Table S4), where the C−X bond for X = CH3 is weaker than the C−X bond for X=H, as well as for the unsubstituted carbon where C…−CH3 has a BDE of 164.3 kcal mol−1 and C…−H of 171.3 kcal mol−1 (see caption Table 1). This already shows that substituting a hydrogen atom for a methyl group gives a weaker bond, and thus destabilizes the species. As we have stated before, whether the C−X bond in MemH3−mC−X becomes weaker or stronger upon methyl substitution, depends on if the methyl substituents destabilize the parent molecule more or less, respectively, than the corresponding radical MemH3−mC⋅. To analyze how the homolytic C−X bond dissociation enthalpy ΔH BDE depends on both, the bonding of substituents in the radical MemH3−mC⋅ and in its parent MemH3−mC−X, we have decomposed it into three terms, i.e., ΔH Par(X,m), ΔH BDE(C…−X), and ΔH Rad(m), associated with the three partial reactions of the thermochemical cycle shown in Scheme 2 (data in Table 1).[ , , ] Thermodynamic cycle for the MemH3−mC−X bond dissociation energy. ΔH Par(X,m) is the overall bond enthalpy as the three separate substituents, that is, m Me⋅+(3−m) H⋅ for m = 0 – 3, combine with C…−X to form the parent molecule MemH3−mC−X. ΔH BDE(C…−X) is the C−X bond dissociation enthalpy of the completely unsubstituted C…−X species, which is in the valence configuration of the CX moiety in MemH3−mC−X. ΔH Rad(m) is the overall bond enthalpy as the three separate substituents mentioned above combine with C…. to form the radical MemH3−mC⋅. Thus, we have the relationship of Equation 2: Note that ΔH Rad(m) is independent of X, whereas ΔH BDE(C…−X) is independent of the methyl and hydrogen substituents. ΔH BDE is thus determined by the intrinsic C−X bond dissociation enthalpy ΔH BDE(C…−X) of the unsubstituted C…−X species plus the difference in stabilization by the substituents of the radical, ΔH Rad(m), and the stabilization of the parent molecule by the same substituents, ΔH Par(X,m). Therefore, when altering the number of methyl substituents from 0 to m, the BDE of MemH3−mC−X does not only depend on the change in stabilization of the radical, but also on the change in stabilization of the parent, Consequently, the trend in ΔH BDE upon increasing methyl substitution is determined by the difference between the two values, ΔΔH Rad(m) and ΔΔH Par(X,m). This insight is the key to understanding the origin of the substituent effects on the BDE of the MemH3−mC−X bond. The change in stabilization by the substituents in MemH3−mC⋅ and in MemH3−mC−X as a function of the number of methyl groups ΔΔH Rad(m) and ΔΔH Par(X,m), according to Equations (3) and (4), respectively, is plotted in Figure 1 and numerically displayed in Table 1 (similar destabilization is found with a variety of other density functionals; see Figure S1 and Table S2). The radical stability decreases from methyl to primary to secondary to tertiary, at odds with textbook knowledge.[ , , , ] Substituting a hydrogen atom for a methyl group (Δm = 1) always effectively destabilizes both, the radical and the parent molecule. We can now explain the observed trends in C−X bond strength for X = H, CH3, and OH. The reason why the C−H bond weakens upon increased methyl substitution (Table 1) is that the radical MemH3−mC⋅ is destabilized less than the corresponding parent MemH3−mC−H is, along this series from m = 0 to 3 (Figure 1). Furthermore, the ΔΔH Par(CH3,m) line increases less steeply from m = 0 to 3 than the ΔΔH Par(H,m) line (Figure 1). Therefore, the C−C bond weakens, but less so than the C−H bond, namely, from 90.0 to 86.3 kcal mol−1 (Table 1). Lastly, the ΔΔH Par(OH,m) line is below the ΔΔH Rad(m) line (Figure 1). The radical is now destabilized more than the parent alcohol from m = 0 to m = 3, and this results in the C−O bond strengthening from 92.8 to 95.8 kcal mol−1 (Table 1). Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on ΔH Par(X,m) and ΔH Rad(m) in Scheme 2 for X = H, CH3 and OH. Computed at M06‐2X/TZ2P at 298.15 K and 1 atm. Next, we address the question why the C−O bond strengthens upon methyl substitution whereas the other C−X bonds weaken (Table 1). To this end, we have analyzed the features in the bonding mechanism that determine the trends in ΔΔE for the two series of model systems with the most prominent difference in trend: those involving C−H bonds (weakening upon methyl substitution) and those involving C−O bonds (strengthening upon methyl substitution). Note that the trend in ΔΔE determines in all cases the trend in ΔΔH (compare Figures 1 and S2). Thus, in the following, we analyze ΔΔE Par(X,m) and ΔΔE Rad(m) and decompose these difference energies, associated with methyl substitution, into the corresponding difference in strain ΔΔE strain and the difference in interaction ΔΔE int (Figure 2). We recall that the interacting fragments to which ΔE Par(X,m) and ΔE Rad(m) refer, are MemH3−m … + CX… and MemH3−m … + C…., respectively (see Scheme 2). For a given m, the bonding analysis is carried out at equal substituent–carbon distances (i.e. equal R−C distance from the fragment MemH3−m … to CX… or to C…., with otherwise optimized geometry parameters), namely those based on the geometry of the corresponding parent with X = H, that is, MemH3−mC−H. This approach prevents that a comparison of energy terms is skewed by geometrical relaxation effects.
Figure 2

Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on ΔE Par(X,m) and ΔE Rad(m) in Scheme 2, and their corresponding activation strain analysis, for X = H and OH. Computed at M06‐2X/TZ2P and, for each m, at equal substituent–carbon distances based on the geometry of MemH3−mC−H.

Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on ΔE Par(X,m) and ΔE Rad(m) in Scheme 2, and their corresponding activation strain analysis, for X = H and OH. Computed at M06‐2X/TZ2P and, for each m, at equal substituent–carbon distances based on the geometry of MemH3−mC−H. In all cases, adding a methyl group (Δm = +1) destabilizes the system by both, a more destabilizing strain (ΔΔE strain > 0) and a less stabilizing interaction energy (ΔΔE int > 0; see Figure 2). This results from more steric (Pauli) repulsion in the following way. The larger methyl groups have more repulsion with the CX… or C…. center and also have more mutual repulsion than the smaller hydrogen atoms. The enhanced Pauli repulsion upon methyl substitution shows up as an increasingly destabilizing term of the interaction energy (ΔΔE Pauli > 0 and ΔΔE int > 0; see Figures 2c and especially 3). But part of the enhanced Pauli repulsion is absorbed into an increasingly destabilizing strain (ΔΔE strain > 0; see Figure 2b) which is associated with a geometrical relaxation predominantly induced by the repulsion between the methyl substituents (vide supra).[ , , ] The reason that the C−H bond nevertheless becomes weaker for methyl substitution is that the parent MemH3−mC−H suffers from a stronger increase in Pauli repulsion than the radical MemH3−mC⋅ (Figures 2c and 3). Therefore, the ΔΔE int,Par(H,m) line increases more steeply from m = 0 to 3 than the ΔΔE int,Rad(m) line. The underlying cause is that the parent is sterically more crowded due to having a higher coordination number (i.e., 4) at the central carbon atom than the radical (i.e., 3). On the other hand, the reason that the C−O bond becomes stronger in the parent MemH3−mC−OH is that the interaction with the methyl groups benefits from the presence of the OH‐group. Therefore, the ΔΔE Par(OH,m) line increases less steeply from m = 0 to 3 than the ΔΔE Par(H,m) line (Figure 2c). This is caused by a more stabilizing electrostatic interaction ΔΔV elstat (and thus interaction energy ΔΔE int) with the methyl groups in MemH3−mCOH than in MemH3−mCH (Figures 2c and 3), which is in line with the reduced electron density on the carbon atom in COH… compared to CH…, as inferred from VDD analysis (Table S7). The same trends are obtained if the bonding analyses are computed at equal substituent–carbon distances stemming from the geometry of the MemH3−mC⋅ radical (Figures S4 and S5).
Figure 3

Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on the energy decomposition analysis of ΔE Par(X,m) and ΔE Rad(m) in Scheme 2 for X = H and OH. Computed at M06‐2X/TZ2P and, for each m, at equal substituent–carbon distances based on the geometry of MemH3−mC−H.

Effect (in kcal mol−1) of substituting hydrogens for m = 0 – 3 methyl groups on the energy decomposition analysis of ΔE Par(X,m) and ΔE Rad(m) in Scheme 2 for X = H and OH. Computed at M06‐2X/TZ2P and, for each m, at equal substituent–carbon distances based on the geometry of MemH3−mC−H. Finally, we address the role of hyperconjugation which, in the current literature, is invoked to explain why methyl substitution would stabilize the organic radical MemH3−mC⋅.[ , ] In the first place, we recall that we just showed that methyl substitution does not stabilize the organic radical. But does hyperconjugation occur at all? And if so, what is its effect? Our MO analyses show that hyperconjugation occurs in both, the parent MemH3−mC−H as well as the radical MemH3−mC⋅, not only in the latter. In Figure 4, the important orbital interactions of A symmetry are shown, i.e., A1′ and A2′′ symmetry for the D 3h‐symmetric methyl radical and A1 symmetry for the C3v‐symmetric tert‐butyl radical and parent molecules. We do find the textbook hyperconjugation which arises from the donor–acceptor interaction between occupied σC‐H orbitals on the methyl substituents and the radical p‐orbital at the central carbon atom, shown in blue in Figure 4b, but also an analogous donor–acceptor orbital interaction in the parent molecule, shown in Figure 4d. Note that, in the case of MemH3−mC⋅, the antibonding combination of this hyperconjugative interaction constitutes the SOMO of the final organic radical (Figure 4b, blue), whereas in the parent MemH3−mC−H, the corresponding orbital is closed‐shell (Figure 4d, blue). Our analyses reveal also other stabilizing 2‐center–3‐electron (2c–3e−) interactions and are shown in red for both the parent and the radical (Figure 4). And in fact, the largest contribution of additional stabilization from orbital interactions upon methyl substitution does not arise in A symmetry (in which the type of hyperconjugation occurs that is described in textbooks; see Figure 4, blue), but in E symmetry (see Figures S7 and S8). For instance, the orbital interaction stabilization from H3C⋅ to Me3C⋅ is in total −107.2 of which −39.0 kcal mol−1 comes from A symmetry and −82.4 kcal mol−1 from E symmetry (Table S8). Again, also in E symmetry, stabilizing hyperconjugative interactions occur in both the radical and the parent. Natural bond orbital (NBO) analyses also confirm that hyperconjugation occurs in both, the parent and the radical (Figures S10 and S11).
Figure 4

Schematic MO diagram, emerging from our KS‐MO analyses at M06‐2X/TZ2P, in A1′ and A2′′ symmetry for a) H3C⋅, and in A1 symmetry for b) Me3C⋅, c) H3CH and d) Me3CH. Interactions: 2c–2e− in black, 2c–3e− in red, 2c–3e− hyperconjugation between Me3 … σC−H and C…. p SOMO or CH… p‐type SOMO in blue.

Schematic MO diagram, emerging from our KS‐MO analyses at M06‐2X/TZ2P, in A1′ and A2′′ symmetry for a) H3C⋅, and in A1 symmetry for b) Me3C⋅, c) H3CH and d) Me3CH. Interactions: 2c–2e− in black, 2c–3e− in red, 2c–3e− hyperconjugation between Me3 … σC−H and C…. p SOMO or CH… p‐type SOMO in blue. Thus, the MO bonding analyses suggest that hyperconjugation has no, or no significant, effect on the relative stability of radicals and parent molecules. This picture is fully confirmed by the energy decomposition analyses (EDA), as can be seen from the virtually overlapping ΔΔE oi lines for radical and parents (Figure 3). Thus, the additional stabilization by orbital interactions upon introducing a methyl group (Δm = +1) is nearly exactly the same for the radical and the parent molecules. In conclusion, our quantum chemical analyses reveal that, in contrast to common textbook knowledge, methyl substitution destabilizes organic radicals MemH3−mC⋅ instead of making them more stable. The reason is disarmingly simple: the bond to a methyl group is less stable than the bond to a hydrogen atom, and there is more mutual repulsion between the larger methyl groups. Still, the C−H and C−C bond for MemH3−mC−X (X=H, CH3) becomes weaker upon methyl substitution because the sterically more congested parent molecules (coordination number of central carbon is 4) are destabilized even more by methyl substitution than the radicals (coordination number of central carbon is only 3). Intriguingly, hyperconjugation has no significant effect on the relative stability of the radical and parent molecule. The current concept that methyl substitution stabilizes organic radicals is the consequence of a misinterpretation of the radical stabilization energies (RSE) which do not only depend on the stability of the radical but also on that of the parent molecule.

Conflict of interest

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9.  Methyl Substitution Destabilizes Alkyl Radicals.

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1.  Methyl Substitution Destabilizes Alkyl Radicals.

Authors:  Eva Blokker; Willem-Jan van Zeist; Xiaobo Sun; Jordi Poater; J Martijn van der Schuur; Trevor A Hamlin; F Matthias Bickelhaupt
Journal:  Angew Chem Int Ed Engl       Date:  2022-08-01       Impact factor: 16.823

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